RNA–Protein interactions for RNA: ENST00000607841.5

CTSA-219, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-219ENST00000607841 CHODLQ9H9P2 273 aa12.12□□□□□ -0.47
CTSA-219ENST00000607841 G6PC2Q9NQR9 355 aa12.12□□□□□ -0.47
CTSA-219ENST00000607841 ACOXLQ9NUZ1 547 aa12.12□□□□□ -0.47
CTSA-219ENST00000607841 SCN3BQ9NY72 215 aa12.12□□□□□ -0.47
CTSA-219ENST00000607841 DIMT1Q9UNQ2 313 aaKnown RBP12.12□□□□□ -0.47
CTSA-219ENST00000607841 EXOSC1Q9Y3B2 195 aaKnown RBP12.12□□□□□ -0.47
CTSA-219ENST00000607841 RTTNQ86VV8 2226 aa12.12□□□□□ -0.47
CTSA-219ENST00000607841 TEP1Q99973 2627 aaKnown RBP12.12□□□□□ -0.47
CTSA-219ENST00000607841 USF3Q68DE3 2245 aa12.11□□□□□ -0.47
CTSA-219ENST00000607841 IGHV1-69-2A0A0G2JMI3 117 aa12.11□□□□□ -0.47
CTSA-219ENST00000607841 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.11□□□□□ -0.47
CTSA-219ENST00000607841 A0A1B0GWJ7 208 aa12.11□□□□□ -0.47
CTSA-219ENST00000607841 LILRA1O75019 489 aa12.11□□□□□ -0.47
CTSA-219ENST00000607841 NCR1O76036 304 aa12.11□□□□□ -0.47
CTSA-219ENST00000607841 TTRP02766 147 aa12.11□□□□□ -0.47
CTSA-219ENST00000607841 CA6P23280 308 aa12.11□□□□□ -0.47
CTSA-219ENST00000607841 GNALP38405 381 aa12.11□□□□□ -0.47
CTSA-219ENST00000607841 MAP2K3P46734 347 aa12.11□□□□□ -0.47
CTSA-219ENST00000607841 TMEM33P57088 247 aa12.11□□□□□ -0.47
CTSA-219ENST00000607841 TNK1Q13470 666 aa12.11□□□□□ -0.47
CTSA-219ENST00000607841 OR8G1Q15617 311 aa12.11□□□□□ -0.47
CTSA-219ENST00000607841 HFEQ30201 348 aa12.11□□□□□ -0.47
CTSA-219ENST00000607841 C6orf141Q5SZD1 244 aa12.11□□□□□ -0.47
CTSA-219ENST00000607841 TMPRSS11AQ6ZMR5 421 aa12.11□□□□□ -0.47
CTSA-219ENST00000607841 CATSPERDQ86XM0 798 aa12.11□□□□□ -0.47
CTSA-219ENST00000607841 STX19Q8N4C7 294 aa12.11□□□□□ -0.47
CTSA-219ENST00000607841 CCDC54Q8NEL0 328 aa12.11□□□□□ -0.47
CTSA-219ENST00000607841 OR51E1Q8TCB6 317 aa12.11□□□□□ -0.47
CTSA-219ENST00000607841 C10orf105Q8TEF2 133 aa12.11□□□□□ -0.47
CTSA-219ENST00000607841 GGHQ92820 318 aa12.11□□□□□ -0.47
CTSA-219ENST00000607841 ZNF184Q99676 751 aaPredicted RBP12.11□□□□□ -0.47
CTSA-219ENST00000607841 Q9H521 79 aa12.11□□□□□ -0.47
CTSA-219ENST00000607841 ABCB9Q9NP78 766 aa12.11□□□□□ -0.47
CTSA-219ENST00000607841 GPR84Q9NQS5 396 aa12.11□□□□□ -0.47
CTSA-219ENST00000607841 PSORS1C1Q9UIG5 152 aa12.11□□□□□ -0.47
CTSA-219ENST00000607841 CCDC168Q8NDH2 2452 aa12.11□□□□□ -0.47
CTSA-219ENST00000607841 IGHV4-30-2A0A087WSY4 118 aa12.1□□□□□ -0.47
CTSA-219ENST00000607841 TRIM64A6NGJ6 449 aa12.1□□□□□ -0.47
CTSA-219ENST00000607841 TRIM64BA6NI03 449 aa12.1□□□□□ -0.47
CTSA-219ENST00000607841 MLNRO43193 412 aa12.1□□□□□ -0.47
CTSA-219ENST00000607841 XPNPEP2O43895 674 aa12.1□□□□□ -0.47
CTSA-219ENST00000607841 CDC14BO60729 498 aa12.1□□□□□ -0.47
CTSA-219ENST00000607841 IGLV3-1P01715 115 aa12.1□□□□□ -0.47
CTSA-219ENST00000607841 HLA-DPB1P04440 258 aa12.1□□□□□ -0.47
CTSA-219ENST00000607841 RPSAP08865 295 aaKnown RBP12.1□□□□□ -0.47
CTSA-219ENST00000607841 HTR1AP08908 422 aa12.1□□□□□ -0.47
CTSA-219ENST00000607841 UBCP0CG48 685 aaKnown RBP12.1□□□□□ -0.47
CTSA-219ENST00000607841 LIMS3P0CW19 117 aa12.1□□□□□ -0.47
CTSA-219ENST00000607841 LIMS4P0CW20 117 aa12.1□□□□□ -0.47
CTSA-219ENST00000607841 CD99P14209 185 aa12.1□□□□□ -0.47
CTSA-219ENST00000607841 COL8A2P25067 703 aa12.1□□□□□ -0.47
CTSA-219ENST00000607841 GIFP27352 417 aa12.1□□□□□ -0.47
CTSA-219ENST00000607841 PSMB10P40306 273 aa12.1□□□□□ -0.47
CTSA-219ENST00000607841 GBX2P52951 348 aaPredicted RBP12.1□□□□□ -0.47
CTSA-219ENST00000607841 SLC3A1Q07837 685 aa12.1□□□□□ -0.47
CTSA-219ENST00000607841 RIPPLY1Q0D2K3 151 aa12.1□□□□□ -0.47
CTSA-219ENST00000607841 ST3GAL4Q11206 333 aa12.1□□□□□ -0.47
CTSA-219ENST00000607841 LAIR2Q6ISS4 152 aa12.1□□□□□ -0.47
CTSA-219ENST00000607841 FDX2Q6P4F2 183 aa12.1□□□□□ -0.47
CTSA-219ENST00000607841 DOK3Q7L591 496 aa12.1□□□□□ -0.47
CTSA-219ENST00000607841 KLHL36Q8N4N3 616 aa12.1□□□□□ -0.47
CTSA-219ENST00000607841 CELF2-AS1Q8N7Q2 184 aa12.1□□□□□ -0.47
CTSA-219ENST00000607841 SEMA6DQ8NFY4 1073 aa12.1□□□□□ -0.47
CTSA-219ENST00000607841 OR10AD1Q8NGE0 317 aa12.1□□□□□ -0.47
CTSA-219ENST00000607841 PPP1R14AQ96A00 147 aa12.1□□□□□ -0.47
CTSA-219ENST00000607841 FAM71F1Q96KD3 344 aaPredicted RBP12.1□□□□□ -0.47
CTSA-219ENST00000607841 LYZL4Q96KX0 146 aa12.1□□□□□ -0.47
CTSA-219ENST00000607841 OR2V2Q96R30 315 aa12.1□□□□□ -0.47
CTSA-219ENST00000607841 ZNF649Q9BS31 505 aa12.1□□□□□ -0.47
CTSA-219ENST00000607841 ADAT1Q9BUB4 502 aaKnown RBP12.1□□□□□ -0.47
CTSA-219ENST00000607841 SLC22A13Q9Y226 551 aa12.1□□□□□ -0.47
CTSA-219ENST00000607841 CAB39Q9Y376 341 aaPredicted RBP12.1□□□□□ -0.47
CTSA-219ENST00000607841 MPC1Q9Y5U8 109 aa12.1□□□□□ -0.47
CTSA-219ENST00000607841 OTOGQ6ZRI0 2925 aa12.09□□□□□ -0.47
CTSA-219ENST00000607841 ZNF816-ZNF321PA0A0X1KG74 233 aa12.09□□□□□ -0.47
CTSA-219ENST00000607841 A0A1B0GVI7 797 aa12.09□□□□□ -0.47
CTSA-219ENST00000607841 ANXA2P2A6NMY6 339 aa12.09□□□□□ -0.47
CTSA-219ENST00000607841 F5H5P2 479 aa12.09□□□□□ -0.47
CTSA-219ENST00000607841 LYNX1G3V0Z9 82 aa12.09□□□□□ -0.47
CTSA-219ENST00000607841 H0YL77 283 aa12.09□□□□□ -0.47
CTSA-219ENST00000607841 IFNL4K9M1U5 179 aa12.09□□□□□ -0.47
CTSA-219ENST00000607841 DHRS3O75911 302 aa12.09□□□□□ -0.47
CTSA-219ENST00000607841 CST4P01036 141 aa12.09□□□□□ -0.47
CTSA-219ENST00000607841 LYNX1P0DP58 116 aa12.09□□□□□ -0.47
CTSA-219ENST00000607841 ZNF12P17014 697 aa12.09□□□□□ -0.47
CTSA-219ENST00000607841 CCR9P51686 369 aa12.09□□□□□ -0.47
CTSA-219ENST00000607841 WDR38Q5JTN6 314 aa12.09□□□□□ -0.47
CTSA-219ENST00000607841 ZBTB37Q5TC79 503 aa12.09□□□□□ -0.47
CTSA-219ENST00000607841 TMEM244Q5VVB8 128 aa12.09□□□□□ -0.47
CTSA-219ENST00000607841 AHSA2Q719I0 299 aa12.09□□□□□ -0.47
CTSA-219ENST00000607841 OR2G2Q8NGZ5 317 aa12.09□□□□□ -0.47
CTSA-219ENST00000607841 OR8S1Q8NH09 359 aa12.09□□□□□ -0.47
CTSA-219ENST00000607841 ITLN1Q8WWA0 313 aa12.09□□□□□ -0.47
CTSA-219ENST00000607841 CCL17Q92583 94 aa12.09□□□□□ -0.47
CTSA-219ENST00000607841 MYDGFQ969H8 173 aa12.09□□□□□ -0.47
CTSA-219ENST00000607841 ERGIC1Q969X5 290 aa12.09□□□□□ -0.47
CTSA-219ENST00000607841 PELI1Q96FA3 418 aa12.09□□□□□ -0.47
CTSA-219ENST00000607841 MEGF10Q96KG7 1140 aa12.09□□□□□ -0.47
CTSA-219ENST00000607841 CNBD2Q96M20 576 aa12.09□□□□□ -0.47
CTSA-219ENST00000607841 HIST1H2AAQ96QV6 131 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms