RNA–Protein interactions for RNA: ENST00000606066.1

CTSA-211, Transcript of cathepsin A, humanhuman

TSL 5

Gene CTSA, Length 603 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-211ENST00000606066 MYL12AP19105 171 aa12.13□□□□□ -0.47
CTSA-211ENST00000606066 TNFRSF1AP19438 455 aa12.13□□□□□ -0.47
CTSA-211ENST00000606066 GSK3AP49840 483 aa12.13□□□□□ -0.47
CTSA-211ENST00000606066 MRPL28Q13084 256 aaKnown RBP12.13□□□□□ -0.47
CTSA-211ENST00000606066 CARTPTQ16568 116 aa12.13□□□□□ -0.47
CTSA-211ENST00000606066 TP53I3Q53FA7 332 aa12.13□□□□□ -0.47
CTSA-211ENST00000606066 CLEC9AQ6UXN8 241 aa12.13□□□□□ -0.47
CTSA-211ENST00000606066 Q6ZR03 302 aa12.13□□□□□ -0.47
CTSA-211ENST00000606066 DNM1P46Q6ZS02 220 aa12.13□□□□□ -0.47
CTSA-211ENST00000606066 LHFPL3Q86UP9 236 aa12.13□□□□□ -0.47
CTSA-211ENST00000606066 COMMD2Q86X83 199 aa12.13□□□□□ -0.47
CTSA-211ENST00000606066 KLBQ86Z14 1044 aa12.13□□□□□ -0.47
CTSA-211ENST00000606066 ELMOD2Q8IZ81 293 aa12.13□□□□□ -0.47
CTSA-211ENST00000606066 SYS1Q8N2H4 156 aa12.13□□□□□ -0.47
CTSA-211ENST00000606066 OR56B2PQ8NGI1 322 aa12.13□□□□□ -0.47
CTSA-211ENST00000606066 HAVCR2Q8TDQ0 301 aa12.13□□□□□ -0.47
CTSA-211ENST00000606066 TMEM80Q96HE8 168 aa12.13□□□□□ -0.47
CTSA-211ENST00000606066 JAM3Q9BX67 310 aa12.13□□□□□ -0.47
CTSA-211ENST00000606066 ANKRD60Q9BZ19 345 aa12.13□□□□□ -0.47
CTSA-211ENST00000606066 RASSF4Q9H2L5 321 aa12.13□□□□□ -0.47
CTSA-211ENST00000606066 PLCXD1Q9NUJ7 323 aa12.13□□□□□ -0.47
CTSA-211ENST00000606066 ERVK13-1Q9NX77 482 aa12.13□□□□□ -0.47
CTSA-211ENST00000606066 CNOT2Q9NZN8 540 aaKnown RBP12.13□□□□□ -0.47
CTSA-211ENST00000606066 IL19Q9UHD0 177 aa12.13□□□□□ -0.47
CTSA-211ENST00000606066 RAB26Q9ULW5 256 aa12.13□□□□□ -0.47
CTSA-211ENST00000606066 J3QLW9 94 aa12.12□□□□□ -0.47
CTSA-211ENST00000606066 GMDSO60547 372 aa12.12□□□□□ -0.47
CTSA-211ENST00000606066 PIPP12273 146 aaPredicted RBP12.12□□□□□ -0.47
CTSA-211ENST00000606066 SLC25A16P16260 332 aa12.12□□□□□ -0.47
CTSA-211ENST00000606066 ZNF19P17023 458 aa12.12□□□□□ -0.47
CTSA-211ENST00000606066 ACHEP22303 614 aa12.12□□□□□ -0.47
CTSA-211ENST00000606066 ANOS1P23352 680 aa12.12□□□□□ -0.47
CTSA-211ENST00000606066 MYF6P23409 242 aa12.12□□□□□ -0.47
CTSA-211ENST00000606066 CRYBB2P43320 205 aa12.12□□□□□ -0.47
CTSA-211ENST00000606066 SRP9P49458 86 aaKnown RBP12.12□□□□□ -0.47
CTSA-211ENST00000606066 PRSS12P56730 875 aa12.12□□□□□ -0.47
CTSA-211ENST00000606066 OR12D2P58182 307 aa12.12□□□□□ -0.47
CTSA-211ENST00000606066 MFGE8Q08431 387 aaPredicted RBP12.12□□□□□ -0.47
CTSA-211ENST00000606066 MZT1Q08AG7 82 aa12.12□□□□□ -0.47
CTSA-211ENST00000606066 OR8B8Q15620 311 aa12.12□□□□□ -0.47
CTSA-211ENST00000606066 SPERTQ8NA61 448 aa12.12□□□□□ -0.47
CTSA-211ENST00000606066 BPIFB6Q8NFQ5 453 aa12.12□□□□□ -0.47
CTSA-211ENST00000606066 RORBQ92753 470 aa12.12□□□□□ -0.47
CTSA-211ENST00000606066 C4orf36Q96KX1 117 aa12.12□□□□□ -0.47
CTSA-211ENST00000606066 PIMREGQ9BSJ6 248 aa12.12□□□□□ -0.47
CTSA-211ENST00000606066 CHODLQ9H9P2 273 aa12.12□□□□□ -0.47
CTSA-211ENST00000606066 G6PC2Q9NQR9 355 aa12.12□□□□□ -0.47
CTSA-211ENST00000606066 ACOXLQ9NUZ1 547 aa12.12□□□□□ -0.47
CTSA-211ENST00000606066 SCN3BQ9NY72 215 aa12.12□□□□□ -0.47
CTSA-211ENST00000606066 DIMT1Q9UNQ2 313 aaKnown RBP12.12□□□□□ -0.47
CTSA-211ENST00000606066 EXOSC1Q9Y3B2 195 aaKnown RBP12.12□□□□□ -0.47
CTSA-211ENST00000606066 RTTNQ86VV8 2226 aa12.12□□□□□ -0.47
CTSA-211ENST00000606066 USF3Q68DE3 2245 aa12.11□□□□□ -0.47
CTSA-211ENST00000606066 IGHV1-69-2A0A0G2JMI3 117 aa12.11□□□□□ -0.47
CTSA-211ENST00000606066 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.11□□□□□ -0.47
CTSA-211ENST00000606066 A0A1B0GWJ7 208 aa12.11□□□□□ -0.47
CTSA-211ENST00000606066 LILRA1O75019 489 aa12.11□□□□□ -0.47
CTSA-211ENST00000606066 NCR1O76036 304 aa12.11□□□□□ -0.47
CTSA-211ENST00000606066 TTRP02766 147 aa12.11□□□□□ -0.47
CTSA-211ENST00000606066 CA6P23280 308 aa12.11□□□□□ -0.47
CTSA-211ENST00000606066 GNALP38405 381 aa12.11□□□□□ -0.47
CTSA-211ENST00000606066 MAP2K3P46734 347 aa12.11□□□□□ -0.47
CTSA-211ENST00000606066 TMEM33P57088 247 aa12.11□□□□□ -0.47
CTSA-211ENST00000606066 TNK1Q13470 666 aa12.11□□□□□ -0.47
CTSA-211ENST00000606066 OR8G1Q15617 311 aa12.11□□□□□ -0.47
CTSA-211ENST00000606066 HFEQ30201 348 aa12.11□□□□□ -0.47
CTSA-211ENST00000606066 C6orf141Q5SZD1 244 aa12.11□□□□□ -0.47
CTSA-211ENST00000606066 TMPRSS11AQ6ZMR5 421 aa12.11□□□□□ -0.47
CTSA-211ENST00000606066 Q71RC1 249 aaPredicted RBP12.11□□□□□ -0.47
CTSA-211ENST00000606066 CATSPERDQ86XM0 798 aa12.11□□□□□ -0.47
CTSA-211ENST00000606066 STX19Q8N4C7 294 aa12.11□□□□□ -0.47
CTSA-211ENST00000606066 CCDC54Q8NEL0 328 aa12.11□□□□□ -0.47
CTSA-211ENST00000606066 OR51E1Q8TCB6 317 aa12.11□□□□□ -0.47
CTSA-211ENST00000606066 C10orf105Q8TEF2 133 aa12.11□□□□□ -0.47
CTSA-211ENST00000606066 GGHQ92820 318 aa12.11□□□□□ -0.47
CTSA-211ENST00000606066 ZNF184Q99676 751 aaPredicted RBP12.11□□□□□ -0.47
CTSA-211ENST00000606066 Q9H521 79 aa12.11□□□□□ -0.47
CTSA-211ENST00000606066 ABCB9Q9NP78 766 aa12.11□□□□□ -0.47
CTSA-211ENST00000606066 GPR84Q9NQS5 396 aa12.11□□□□□ -0.47
CTSA-211ENST00000606066 PSORS1C1Q9UIG5 152 aa12.11□□□□□ -0.47
CTSA-211ENST00000606066 TLN2Q9Y4G6 2542 aa12.1□□□□□ -0.47
CTSA-211ENST00000606066 IGHV4-30-2A0A087WSY4 118 aa12.1□□□□□ -0.47
CTSA-211ENST00000606066 TRIM64A6NGJ6 449 aa12.1□□□□□ -0.47
CTSA-211ENST00000606066 TRIM64BA6NI03 449 aa12.1□□□□□ -0.47
CTSA-211ENST00000606066 MLNRO43193 412 aa12.1□□□□□ -0.47
CTSA-211ENST00000606066 XPNPEP2O43895 674 aa12.1□□□□□ -0.47
CTSA-211ENST00000606066 CDC14BO60729 498 aa12.1□□□□□ -0.47
CTSA-211ENST00000606066 IGLV3-1P01715 115 aa12.1□□□□□ -0.47
CTSA-211ENST00000606066 HLA-DPB1P04440 258 aa12.1□□□□□ -0.47
CTSA-211ENST00000606066 RPSAP08865 295 aaKnown RBP12.1□□□□□ -0.47
CTSA-211ENST00000606066 HTR1AP08908 422 aa12.1□□□□□ -0.47
CTSA-211ENST00000606066 UBCP0CG48 685 aaKnown RBP12.1□□□□□ -0.47
CTSA-211ENST00000606066 LIMS3P0CW19 117 aa12.1□□□□□ -0.47
CTSA-211ENST00000606066 LIMS4P0CW20 117 aa12.1□□□□□ -0.47
CTSA-211ENST00000606066 COL8A2P25067 703 aa12.1□□□□□ -0.47
CTSA-211ENST00000606066 GIFP27352 417 aa12.1□□□□□ -0.47
CTSA-211ENST00000606066 PSMB10P40306 273 aa12.1□□□□□ -0.47
CTSA-211ENST00000606066 GBX2P52951 348 aaPredicted RBP12.1□□□□□ -0.47
CTSA-211ENST00000606066 SLC3A1Q07837 685 aa12.1□□□□□ -0.47
CTSA-211ENST00000606066 RIPPLY1Q0D2K3 151 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms