RNA–Protein interactions for RNA: ENST00000604164.5

CCDC12-209, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 399 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-209ENST00000604164 METRNQ9UJH8 293 aa9.72□□□□□ -0.85
CCDC12-209ENST00000604164 PPIAL4AQ9Y536 164 aa9.72□□□□□ -0.85
CCDC12-209ENST00000604164 LRP12Q9Y561 859 aa9.72□□□□□ -0.85
CCDC12-209ENST00000604164 MALRD1Q5VYJ5 2156 aa9.71□□□□□ -0.85
CCDC12-209ENST00000604164 hCG_38984A0A1B0GV85 526 aa9.71□□□□□ -0.86
CCDC12-209ENST00000604164 TMEM269A0A1B0GVZ9 245 aa9.71□□□□□ -0.86
CCDC12-209ENST00000604164 CCDC182A6NF36 153 aa9.71□□□□□ -0.86
CCDC12-209ENST00000604164 SAC3D1A6NKF1 404 aa9.71□□□□□ -0.86
CCDC12-209ENST00000604164 ZNF670-ZNF695F2Z2N8 137 aa9.71□□□□□ -0.86
CCDC12-209ENST00000604164 NDUFA2O43678 99 aa9.71□□□□□ -0.86
CCDC12-209ENST00000604164 PTBP3O95758 552 aaKnown RBP9.71□□□□□ -0.86
CCDC12-209ENST00000604164 ATP6V1B1P15313 513 aa9.71□□□□□ -0.86
CCDC12-209ENST00000604164 RPS2P15880 293 aaKnown RBP9.71□□□□□ -0.86
CCDC12-209ENST00000604164 GSK3AP49840 483 aa9.71□□□□□ -0.86
CCDC12-209ENST00000604164 RIDAP52758 137 aaKnown RBP9.71□□□□□ -0.86
CCDC12-209ENST00000604164 PRSS12P56730 875 aa9.71□□□□□ -0.86
CCDC12-209ENST00000604164 EFNB1P98172 346 aa9.71□□□□□ -0.86
CCDC12-209ENST00000604164 TMED1Q13445 227 aa9.71□□□□□ -0.86
CCDC12-209ENST00000604164 GFOD2Q3B7J2 385 aa9.71□□□□□ -0.86
CCDC12-209ENST00000604164 AADACL4Q5VUY2 407 aa9.71□□□□□ -0.86
CCDC12-209ENST00000604164 LRRN1Q6UXK5 716 aa9.71□□□□□ -0.86
CCDC12-209ENST00000604164 IL17RELQ6ZVW7 336 aa9.71□□□□□ -0.86
CCDC12-209ENST00000604164 RFLNBQ8N5W9 214 aa9.71□□□□□ -0.86
CCDC12-209ENST00000604164 OR8B3Q8NGG8 313 aa9.71□□□□□ -0.86
CCDC12-209ENST00000604164 FAM81AQ8TBF8 368 aa9.71□□□□□ -0.86
CCDC12-209ENST00000604164 TRUB1Q8WWH5 349 aaKnown RBP9.71□□□□□ -0.86
CCDC12-209ENST00000604164 OR8B2Q96RD0 313 aa9.71□□□□□ -0.86
CCDC12-209ENST00000604164 IL4I1Q96RQ9 567 aa9.71□□□□□ -0.86
CCDC12-209ENST00000604164 AMELYQ99218 206 aa9.71□□□□□ -0.86
CCDC12-209ENST00000604164 MICU1Q9BPX6 476 aa9.71□□□□□ -0.86
CCDC12-209ENST00000604164 PAPOLGQ9BWT3 736 aaKnown RBP9.71□□□□□ -0.86
CCDC12-209ENST00000604164 MOB1AQ9H8S9 216 aa9.71□□□□□ -0.86
CCDC12-209ENST00000604164 G6PC2Q9NQR9 355 aa9.71□□□□□ -0.86
CCDC12-209ENST00000604164 CLN6Q9NWW5 311 aa9.71□□□□□ -0.86
CCDC12-209ENST00000604164 IMPAD1Q9NX62 359 aa9.71□□□□□ -0.86
CCDC12-209ENST00000604164 OR5V1Q9UGF6 321 aa9.71□□□□□ -0.86
CCDC12-209ENST00000604164 IKZF2Q9UKS7 526 aa9.71□□□□□ -0.86
CCDC12-209ENST00000604164 POLR3KQ9Y2Y1 108 aaPredicted RBP9.71□□□□□ -0.86
CCDC12-209ENST00000604164 MPC1Q9Y5U8 109 aa9.71□□□□□ -0.86
CCDC12-209ENST00000604164 DYSFO75923 2080 aa9.71□□□□□ -0.86
CCDC12-209ENST00000604164 TRAV38-1A0A0B4J264 116 aa9.7□□□□□ -0.86
CCDC12-209ENST00000604164 A0A0U1RQV5 110 aa9.7□□□□□ -0.86
CCDC12-209ENST00000604164 A6NLC8 198 aa9.7□□□□□ -0.86
CCDC12-209ENST00000604164 SNTNA6NMZ2 147 aa9.7□□□□□ -0.86
CCDC12-209ENST00000604164 CEACAM18A8MTB9 384 aa9.7□□□□□ -0.86
CCDC12-209ENST00000604164 A8MXK9 166 aa9.7□□□□□ -0.86
CCDC12-209ENST00000604164 F5H0A9 414 aaPredicted RBP9.7□□□□□ -0.86
CCDC12-209ENST00000604164 FAM20BO75063 409 aa9.7□□□□□ -0.86
CCDC12-209ENST00000604164 MTRF1O75570 445 aaKnown RBP9.7□□□□□ -0.86
CCDC12-209ENST00000604164 CYB5R3P00387 301 aaPredicted RBP9.7□□□□□ -0.86
CCDC12-209ENST00000604164 MRPL3P09001 348 aaKnown RBP9.7□□□□□ -0.86
CCDC12-209ENST00000604164 HTR1FP30939 366 aa9.7□□□□□ -0.86
CCDC12-209ENST00000604164 ATP6V1E1P36543 226 aa9.7□□□□□ -0.86
CCDC12-209ENST00000604164 MAP2K3P46734 347 aa9.7□□□□□ -0.86
CCDC12-209ENST00000604164 LCN2P80188 198 aa9.7□□□□□ -0.86
CCDC12-209ENST00000604164 EGR3Q06889 387 aa9.7□□□□□ -0.86
CCDC12-209ENST00000604164 OR8B8Q15620 311 aa9.7□□□□□ -0.86
CCDC12-209ENST00000604164 ZNF404Q494X3 552 aa9.7□□□□□ -0.86
CCDC12-209ENST00000604164 DCDC5Q6ZRR9 648 aa9.7□□□□□ -0.86
CCDC12-209ENST00000604164 ZNF771Q7L3S4 317 aaPredicted RBP9.7□□□□□ -0.86
CCDC12-209ENST00000604164 COMMD2Q86X83 199 aa9.7□□□□□ -0.86
CCDC12-209ENST00000604164 SLC35F2Q8IXU6 374 aa9.7□□□□□ -0.86
CCDC12-209ENST00000604164 NANPQ8TBE9 248 aa9.7□□□□□ -0.86
CCDC12-209ENST00000604164 NEIL1Q96FI4 390 aaPredicted RBP9.7□□□□□ -0.86
CCDC12-209ENST00000604164 HIST1H2AAQ96QV6 131 aa9.7□□□□□ -0.86
CCDC12-209ENST00000604164 OR8B4Q96RC9 309 aa9.7□□□□□ -0.86
CCDC12-209ENST00000604164 MYCBPQ99417 103 aaPredicted RBP9.7□□□□□ -0.86
CCDC12-209ENST00000604164 PKP2Q99959 881 aa9.7□□□□□ -0.86
CCDC12-209ENST00000604164 C9orf16Q9BUW7 83 aa9.7□□□□□ -0.86
CCDC12-209ENST00000604164 RTL8AQ9BWD3 113 aa9.7□□□□□ -0.86
CCDC12-209ENST00000604164 SSBP3Q9BWW4 388 aaPredicted RBP9.7□□□□□ -0.86
CCDC12-209ENST00000604164 UFSP2Q9NUQ7 469 aa9.7□□□□□ -0.86
CCDC12-209ENST00000604164 DCAF16Q9NXF7 216 aa9.7□□□□□ -0.86
CCDC12-209ENST00000604164 USE1Q9NZ43 259 aa9.7□□□□□ -0.86
CCDC12-209ENST00000604164 KLHDC2Q9Y2U9 406 aa9.7□□□□□ -0.86
CCDC12-209ENST00000604164 A0A0A6YYJ9 748 aa9.69□□□□□ -0.86
CCDC12-209ENST00000604164 IGHV3-64DA0A0J9YX35 117 aa9.69□□□□□ -0.86
CCDC12-209ENST00000604164 hCG_1807616A0A1W2PRN6 198 aa9.69□□□□□ -0.86
CCDC12-209ENST00000604164 C5orf63A6NC05 138 aa9.69□□□□□ -0.86
CCDC12-209ENST00000604164 TMEM210A6NLX4 147 aa9.69□□□□□ -0.86
CCDC12-209ENST00000604164 TCF21O43680 179 aa9.69□□□□□ -0.86
CCDC12-209ENST00000604164 CST4P01036 141 aa9.69□□□□□ -0.86
CCDC12-209ENST00000604164 ALPLP05186 524 aa9.69□□□□□ -0.86
CCDC12-209ENST00000604164 GRPP07492 148 aa9.69□□□□□ -0.86
CCDC12-209ENST00000604164 WNT2P09544 360 aa9.69□□□□□ -0.86
CCDC12-209ENST00000604164 OR2T7P0C7T2 308 aa9.69□□□□□ -0.86
CCDC12-209ENST00000604164 EPHA2P29317 976 aa9.69□□□□□ -0.86
CCDC12-209ENST00000604164 NPY4RP50391 375 aa9.69□□□□□ -0.86
CCDC12-209ENST00000604164 ALDH3A2P51648 485 aa9.69□□□□□ -0.86
CCDC12-209ENST00000604164 CXCR4P61073 352 aa9.69□□□□□ -0.86
CCDC12-209ENST00000604164 GNB2P62879 340 aa9.69□□□□□ -0.86
CCDC12-209ENST00000604164 PRAMEF6Q5VXH4 476 aa9.69□□□□□ -0.86
CCDC12-209ENST00000604164 ZNF322Q6U7Q0 402 aaPredicted RBP9.69□□□□□ -0.86
CCDC12-209ENST00000604164 BTNL3Q6UXE8 466 aa9.69□□□□□ -0.86
CCDC12-209ENST00000604164 GALNT4Q8N4A0 578 aa9.69□□□□□ -0.86
CCDC12-209ENST00000604164 OR8B12Q8NGG6 310 aa9.69□□□□□ -0.86
CCDC12-209ENST00000604164 OR2T27Q8NH04 317 aa9.69□□□□□ -0.86
CCDC12-209ENST00000604164 STMN2Q93045 179 aa9.69□□□□□ -0.86
CCDC12-209ENST00000604164 TMEM246Q9BRR3 403 aa9.69□□□□□ -0.86
CCDC12-209ENST00000604164 MRI1Q9BV20 369 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms