RNA–Protein interactions for RNA: ENST00000600970.5

USE1-208, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 5

Gene USE1, Length 826 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-208ENST00000600970 H1F0P07305 194 aaKnown RBP13.69□□□□□ -0.22
USE1-208ENST00000600970 TROVE2P10155 538 aaKnown RBP eCLIP13.69□□□□□ -0.22
USE1-208ENST00000600970 HIST1H1CP16403 213 aaKnown RBP13.69□□□□□ -0.22
USE1-208ENST00000600970 AMY2BP19961 511 aa13.69□□□□□ -0.22
USE1-208ENST00000600970 UBE2E1P51965 193 aa13.69□□□□□ -0.22
USE1-208ENST00000600970 DGCR6Q14129 220 aa13.69□□□□□ -0.22
USE1-208ENST00000600970 FGD3Q5JSP0 725 aa13.69□□□□□ -0.22
USE1-208ENST00000600970 WDR86Q86TI4 376 aa13.69□□□□□ -0.22
USE1-208ENST00000600970 LYG1Q8N1E2 194 aa13.69□□□□□ -0.22
USE1-208ENST00000600970 BEND2Q8NDZ0 799 aa13.69□□□□□ -0.22
USE1-208ENST00000600970 OR4K13Q8NH42 304 aa13.69□□□□□ -0.22
USE1-208ENST00000600970 SGCDQ92629 289 aa13.69□□□□□ -0.22
USE1-208ENST00000600970 SEH1LQ96EE3 360 aa13.69□□□□□ -0.22
USE1-208ENST00000600970 ATP6V1G3Q96LB4 118 aa13.69□□□□□ -0.22
USE1-208ENST00000600970 SSX3Q99909 188 aa13.69□□□□□ -0.22
USE1-208ENST00000600970 SIKE1Q9BRV8 207 aa13.69□□□□□ -0.22
USE1-208ENST00000600970 FN3KQ9H479 309 aa13.69□□□□□ -0.22
USE1-208ENST00000600970 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.69□□□□□ -0.22
USE1-208ENST00000600970 MRPL22Q9NWU5 206 aaKnown RBP13.69□□□□□ -0.22
USE1-208ENST00000600970 CMTM6Q9NX76 183 aa13.69□□□□□ -0.22
USE1-208ENST00000600970 MAB21L2Q9Y586 359 aa13.69□□□□□ -0.22
USE1-208ENST00000600970 LOC100653049A0A140TA62 436 aa13.68□□□□□ -0.22
USE1-208ENST00000600970 KRT34O76011 436 aa13.68□□□□□ -0.22
USE1-208ENST00000600970 SERPINA1P01009 418 aa13.68□□□□□ -0.22
USE1-208ENST00000600970 OTX1P32242 354 aaPredicted RBP13.68□□□□□ -0.22
USE1-208ENST00000600970 GRK5P34947 590 aa13.68□□□□□ -0.22
USE1-208ENST00000600970 RPS27P42677 84 aaKnown RBP13.68□□□□□ -0.22
USE1-208ENST00000600970 TGM4P49221 684 aa13.68□□□□□ -0.22
USE1-208ENST00000600970 ACSM1Q08AH1 577 aa13.68□□□□□ -0.22
USE1-208ENST00000600970 IKZF1Q13422 519 aa13.68□□□□□ -0.22
USE1-208ENST00000600970 SEC23BQ15437 767 aa13.68□□□□□ -0.22
USE1-208ENST00000600970 LY6EQ16553 131 aa13.68□□□□□ -0.22
USE1-208ENST00000600970 VAX1Q5SQQ9 334 aa13.68□□□□□ -0.22
USE1-208ENST00000600970 DRAM2Q6UX65 266 aa13.68□□□□□ -0.22
USE1-208ENST00000600970 DPY19L4Q7Z388 723 aa13.68□□□□□ -0.22
USE1-208ENST00000600970 OR4C13Q8NGP0 309 aa13.68□□□□□ -0.22
USE1-208ENST00000600970 OR2T6Q8NHC8 308 aa13.68□□□□□ -0.22
USE1-208ENST00000600970 TRBV4-1A0A0J9YWV2 114 aa13.67□□□□□ -0.22
USE1-208ENST00000600970 OR6C68A6NDL8 312 aa13.67□□□□□ -0.22
USE1-208ENST00000600970 ARPC3O15145 178 aa13.67□□□□□ -0.22
USE1-208ENST00000600970 VSIG10L2P0DP72 767 aa13.67□□□□□ -0.22
USE1-208ENST00000600970 SELLP14151 372 aa13.67□□□□□ -0.22
USE1-208ENST00000600970 CSNK2BP67870 215 aa13.67□□□□□ -0.22
USE1-208ENST00000600970 MAPRE2Q15555 327 aa13.67□□□□□ -0.22
USE1-208ENST00000600970 NSUN5P1Q3KNT7 163 aa13.67□□□□□ -0.22
USE1-208ENST00000600970 LRRC10Q5BKY1 277 aa13.67□□□□□ -0.22
USE1-208ENST00000600970 CRIP3Q6Q6R5 217 aa13.67□□□□□ -0.22
USE1-208ENST00000600970 WDR82Q6UXN9 313 aa13.67□□□□□ -0.22
USE1-208ENST00000600970 SDR9C7Q8NEX9 313 aa13.67□□□□□ -0.22
USE1-208ENST00000600970 OR1M1Q8NGA1 313 aa13.67□□□□□ -0.22
USE1-208ENST00000600970 OR8S1Q8NH09 359 aa13.67□□□□□ -0.22
USE1-208ENST00000600970 C17orf50Q8WW18 174 aa13.67□□□□□ -0.22
USE1-208ENST00000600970 H1FXQ92522 213 aaKnown RBP13.67□□□□□ -0.22
USE1-208ENST00000600970 PHF21AQ96BD5 680 aa13.67□□□□□ -0.22
USE1-208ENST00000600970 C12orf43Q96C57 262 aaKnown RBP13.67□□□□□ -0.22
USE1-208ENST00000600970 RANBP3Q9H6Z4 567 aaPredicted RBP13.67□□□□□ -0.22
USE1-208ENST00000600970 KCNG2Q9UJ96 466 aa13.67□□□□□ -0.22
USE1-208ENST00000600970 NBEAL2Q6ZNJ1 2754 aa13.66□□□□□ -0.22
USE1-208ENST00000600970 ANKRD30BLA7E2S9 258 aa13.66□□□□□ -0.22
USE1-208ENST00000600970 ZNF823P16415 610 aa13.66□□□□□ -0.22
USE1-208ENST00000600970 SLC6A6P31641 620 aa13.66□□□□□ -0.22
USE1-208ENST00000600970 LIPEQ05469 1076 aa13.66□□□□□ -0.22
USE1-208ENST00000600970 ATPAF1Q5TC12 328 aaPredicted RBP13.66□□□□□ -0.22
USE1-208ENST00000600970 NCR3LG1Q68D85 454 aa13.66□□□□□ -0.22
USE1-208ENST00000600970 STUMQ69YW2 141 aa13.66□□□□□ -0.22
USE1-208ENST00000600970 SLC15A3Q8IY34 581 aa13.66□□□□□ -0.22
USE1-208ENST00000600970 OR4S1Q8NGB4 309 aa13.66□□□□□ -0.22
USE1-208ENST00000600970 OR5T2Q8NGG2 359 aa13.66□□□□□ -0.22
USE1-208ENST00000600970 FANK1Q8TC84 345 aa13.66□□□□□ -0.22
USE1-208ENST00000600970 RORBQ92753 470 aa13.66□□□□□ -0.22
USE1-208ENST00000600970 CLPTM1LQ96KA5 538 aa13.66□□□□□ -0.22
USE1-208ENST00000600970 NSRP1Q9H0G5 558 aaKnown RBP13.66□□□□□ -0.22
USE1-208ENST00000600970 MMP28Q9H239 520 aa13.66□□□□□ -0.22
USE1-208ENST00000600970 OR52D1Q9H346 318 aa13.66□□□□□ -0.22
USE1-208ENST00000600970 OPA3Q9H6K4 179 aa13.66□□□□□ -0.22
USE1-208ENST00000600970 KRCC1Q9NPI7 259 aaPredicted RBP13.66□□□□□ -0.22
USE1-208ENST00000600970 MRGBPQ9NV56 204 aa13.66□□□□□ -0.22
USE1-208ENST00000600970 AP3M1Q9Y2T2 418 aa13.66□□□□□ -0.22
USE1-208ENST00000600970 MEGF11A6BM72 1044 aa13.65□□□□□ -0.22
USE1-208ENST00000600970 M0R1W7 72 aa13.65□□□□□ -0.22
USE1-208ENST00000600970 GSTA4O15217 222 aa13.65□□□□□ -0.22
USE1-208ENST00000600970 SLC2A1P11166 492 aa13.65□□□□□ -0.22
USE1-208ENST00000600970 PSKH1P11801 424 aa13.65□□□□□ -0.22
USE1-208ENST00000600970 DDOSTP39656 456 aa13.65□□□□□ -0.22
USE1-208ENST00000600970 NAA10P41227 235 aaPredicted RBP13.65□□□□□ -0.22
USE1-208ENST00000600970 PRKXP51817 358 aa13.65□□□□□ -0.22
USE1-208ENST00000600970 HCP5Q6MZN7 132 aa13.65□□□□□ -0.22
USE1-208ENST00000600970 OR51G2Q8NGK0 314 aa13.65□□□□□ -0.22
USE1-208ENST00000600970 SPSB4Q96A44 273 aa13.65□□□□□ -0.22
USE1-208ENST00000600970 AJUBAQ96IF1 538 aa13.65□□□□□ -0.22
USE1-208ENST00000600970 FUZQ9BT04 418 aa13.65□□□□□ -0.22
USE1-208ENST00000600970 FAM234AQ9H0X4 552 aa13.65□□□□□ -0.22
USE1-208ENST00000600970 MEGF9Q9H1U4 602 aa13.65□□□□□ -0.22
USE1-208ENST00000600970 METTL8Q9H825 291 aaKnown RBP13.65□□□□□ -0.22
USE1-208ENST00000600970 SAR1AQ9NR31 198 aa13.65□□□□□ -0.22
USE1-208ENST00000600970 NDUFAF4Q9P032 175 aa13.65□□□□□ -0.22
USE1-208ENST00000600970 FAM32AQ9Y421 112 aaKnown RBP13.65□□□□□ -0.22
USE1-208ENST00000600970 N6AMT1Q9Y5N5 214 aa13.65□□□□□ -0.22
USE1-208ENST00000600970 XRCC2O43543 280 aa13.64□□□□□ -0.23
USE1-208ENST00000600970 FBXO24O75426 580 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms