RNA–Protein interactions for RNA: ENST00000600733.5

SHKBP1-225, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5 BASIC

Gene SHKBP1, Length 2,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-225ENST00000600733 DUX4Q9UBX2 424 aa17.86■□□□□ 0.45
SHKBP1-225ENST00000600733 FRYLO94915 3013 aa17.86■□□□□ 0.45
SHKBP1-225ENST00000600733 CACNA1EQ15878 2313 aa17.86■□□□□ 0.45
SHKBP1-225ENST00000600733 CNTRLQ7Z7A1 2325 aa17.86■□□□□ 0.45
SHKBP1-225ENST00000600733 IGLV3-32A0A0A0MS00 114 aa17.86■□□□□ 0.45
SHKBP1-225ENST00000600733 DBX1A6NMT0 343 aa17.86■□□□□ 0.45
SHKBP1-225ENST00000600733 ZNF43P17038 809 aa17.86■□□□□ 0.45
SHKBP1-225ENST00000600733 NPY4RP50391 375 aa17.86■□□□□ 0.45
SHKBP1-225ENST00000600733 PPIAP62937 165 aaKnown RBP17.86■□□□□ 0.45
SHKBP1-225ENST00000600733 SNTB1Q13884 538 aaKnown RBP17.86■□□□□ 0.45
SHKBP1-225ENST00000600733 TMEM176BQ3YBM2 270 aaPredicted RBP17.86■□□□□ 0.45
SHKBP1-225ENST00000600733 OR52H1Q8NGJ2 320 aa17.86■□□□□ 0.45
SHKBP1-225ENST00000600733 TERB2Q8NHR7 220 aa17.86■□□□□ 0.45
SHKBP1-225ENST00000600733 SPSB2Q99619 263 aa17.86■□□□□ 0.45
SHKBP1-225ENST00000600733 CRTAPO75718 401 aaPredicted RBP17.85■□□□□ 0.45
SHKBP1-225ENST00000600733 CRHP06850 196 aa17.85■□□□□ 0.45
SHKBP1-225ENST00000600733 PI3P19957 117 aa17.85■□□□□ 0.45
SHKBP1-225ENST00000600733 PAN3Q58A45 887 aaKnown RBP17.85■□□□□ 0.45
SHKBP1-225ENST00000600733 PRAMEF20Q5VT98 475 aa17.85■□□□□ 0.45
SHKBP1-225ENST00000600733 ARMC10Q8N2F6 343 aa17.85■□□□□ 0.45
SHKBP1-225ENST00000600733 ZNF283Q8N7M2 679 aa17.85■□□□□ 0.45
SHKBP1-225ENST00000600733 ADPRHL1Q8NDY3 354 aa17.85■□□□□ 0.45
SHKBP1-225ENST00000600733 OR6X1Q8NH79 312 aa17.85■□□□□ 0.45
SHKBP1-225ENST00000600733 KCNG3Q8TAE7 436 aa17.85■□□□□ 0.45
SHKBP1-225ENST00000600733 ARHGAP5-AS1Q96IT6 56 aa17.85■□□□□ 0.45
SHKBP1-225ENST00000600733 GPER1Q99527 375 aa17.85■□□□□ 0.45
SHKBP1-225ENST00000600733 DNTTIP1Q9H147 329 aa17.85■□□□□ 0.45
SHKBP1-225ENST00000600733 AKIRIN1Q9H9L7 192 aaPredicted RBP17.85■□□□□ 0.45
SHKBP1-225ENST00000600733 CHMP1AQ9HD42 196 aaPredicted RBP17.85■□□□□ 0.45
SHKBP1-225ENST00000600733 PRR13Q9NZ81 148 aa17.85■□□□□ 0.45
SHKBP1-225ENST00000600733 CSAG2Q9Y5P2 127 aa17.85■□□□□ 0.45
SHKBP1-225ENST00000600733 MYO7BQ6PIF6 2116 aa17.85■□□□□ 0.45
SHKBP1-225ENST00000600733 IGKV1-9A0A0C4DH69 117 aa17.84■□□□□ 0.45
SHKBP1-225ENST00000600733 PGAM2P15259 253 aa17.84■□□□□ 0.45
SHKBP1-225ENST00000600733 PGAP1Q75T13 922 aa17.84■□□□□ 0.45
SHKBP1-225ENST00000600733 WDSUB1Q8N9V3 476 aa17.84■□□□□ 0.45
SHKBP1-225ENST00000600733 TMEM185AQ8NFB2 350 aa17.84■□□□□ 0.45
SHKBP1-225ENST00000600733 BPIFCQ8NFQ6 507 aa17.84■□□□□ 0.45
SHKBP1-225ENST00000600733 OR5D18Q8NGL1 313 aa17.84■□□□□ 0.45
SHKBP1-225ENST00000600733 ROBO4Q8WZ75 1007 aa17.84■□□□□ 0.45
SHKBP1-225ENST00000600733 PHYHIPLQ96FC7 376 aa17.84■□□□□ 0.45
SHKBP1-225ENST00000600733 C5orf66Q9H5L9 145 aa17.84■□□□□ 0.45
SHKBP1-225ENST00000600733 B3GALT1Q9Y5Z6 326 aa17.84■□□□□ 0.45
SHKBP1-225ENST00000600733 A0A1W2PQM1 296 aa17.84■□□□□ 0.45
SHKBP1-225ENST00000600733 GP1BAP07359 652 aa17.84■□□□□ 0.45
SHKBP1-225ENST00000600733 GSTP1P09211 210 aaKnown RBP17.84■□□□□ 0.45
SHKBP1-225ENST00000600733 PSMB6P28072 239 aa17.84■□□□□ 0.45
SHKBP1-225ENST00000600733 NAA40Q86UY6 237 aa17.84■□□□□ 0.45
SHKBP1-225ENST00000600733 ELP5Q8TE02 316 aa17.84■□□□□ 0.45
SHKBP1-225ENST00000600733 TMEM230Q96A57 120 aa17.84■□□□□ 0.45
SHKBP1-225ENST00000600733 OXGR1Q96P68 337 aa17.84■□□□□ 0.45
SHKBP1-225ENST00000600733 RASL10BQ96S79 203 aa17.84■□□□□ 0.45
SHKBP1-225ENST00000600733 ARPC5LQ9BPX5 153 aa17.84■□□□□ 0.45
SHKBP1-225ENST00000600733 RARRES3Q9UL19 164 aa17.84■□□□□ 0.45
SHKBP1-225ENST00000600733 MRPS17Q9Y2R5 130 aaKnown RBP17.84■□□□□ 0.45
SHKBP1-225ENST00000600733 TOX3O15405 576 aaPredicted RBP17.83■□□□□ 0.45
SHKBP1-225ENST00000600733 DEFA5Q01523 94 aa17.83■□□□□ 0.45
SHKBP1-225ENST00000600733 OR4K17Q8NGC6 315 aa17.83■□□□□ 0.45
SHKBP1-225ENST00000600733 NPRL2Q8WTW4 380 aa17.83■□□□□ 0.45
SHKBP1-225ENST00000600733 NARS2Q96I59 477 aaKnown RBP17.83■□□□□ 0.45
SHKBP1-225ENST00000600733 PRELID1Q9Y255 219 aa17.83■□□□□ 0.45
SHKBP1-225ENST00000600733 ZNF726A6NNF4 738 aa17.83■□□□□ 0.44
SHKBP1-225ENST00000600733 SLC9A3R2Q15599 337 aa17.83■□□□□ 0.44
SHKBP1-225ENST00000600733 HIST3H3Q16695 136 aa17.83■□□□□ 0.44
SHKBP1-225ENST00000600733 TMEM128Q5BJH2 165 aa17.83■□□□□ 0.44
SHKBP1-225ENST00000600733 ZNF385CQ66K41 422 aaPredicted RBP17.83■□□□□ 0.44
SHKBP1-225ENST00000600733 DCUN1D4Q92564 292 aa17.83■□□□□ 0.44
SHKBP1-225ENST00000600733 SPACA9Q96E40 222 aaPredicted RBP17.83■□□□□ 0.44
SHKBP1-225ENST00000600733 LRRC46Q96FV0 321 aa17.83■□□□□ 0.44
SHKBP1-225ENST00000600733 LIN37Q96GY3 246 aaPredicted RBP17.83■□□□□ 0.44
SHKBP1-225ENST00000600733 FAM117AQ9C073 453 aa17.83■□□□□ 0.44
SHKBP1-225ENST00000600733 ANAPC10Q9UM13 185 aa17.83■□□□□ 0.44
SHKBP1-225ENST00000600733 NAT1P18440 290 aa17.82■□□□□ 0.44
SHKBP1-225ENST00000600733 TAS2R31P59538 309 aa17.82■□□□□ 0.44
SHKBP1-225ENST00000600733 SGCAQ16586 387 aa17.82■□□□□ 0.44
SHKBP1-225ENST00000600733 C1QL2Q7Z5L3 287 aa17.82■□□□□ 0.44
SHKBP1-225ENST00000600733 OR5AP2Q8NGF4 316 aa17.82■□□□□ 0.44
SHKBP1-225ENST00000600733 OR1S2Q8NGQ3 325 aa17.82■□□□□ 0.44
SHKBP1-225ENST00000600733 SLC22A8Q8TCC7 542 aa17.82■□□□□ 0.44
SHKBP1-225ENST00000600733 ZNF416Q9BWM5 594 aa17.82■□□□□ 0.44
SHKBP1-225ENST00000600733 ZC4H2Q9NQZ6 224 aa17.82■□□□□ 0.44
SHKBP1-225ENST00000600733 PCDHB10Q9UN67 800 aa17.82■□□□□ 0.44
SHKBP1-225ENST00000600733 GPR132Q9UNW8 380 aa17.82■□□□□ 0.44
SHKBP1-225ENST00000600733 MPTX1A8MV57 137 aa17.82■□□□□ 0.44
SHKBP1-225ENST00000600733 MFNGO00587 321 aa17.82■□□□□ 0.44
SHKBP1-225ENST00000600733 ADAP1O75689 374 aa17.82■□□□□ 0.44
SHKBP1-225ENST00000600733 CCL1P22362 96 aa17.82■□□□□ 0.44
SHKBP1-225ENST00000600733 CLDN17P56750 224 aa17.82■□□□□ 0.44
SHKBP1-225ENST00000600733 CCL7P80098 99 aa17.82■□□□□ 0.44
SHKBP1-225ENST00000600733 MC2RQ01718 297 aa17.82■□□□□ 0.44
SHKBP1-225ENST00000600733 VAX1Q5SQQ9 334 aa17.82■□□□□ 0.44
SHKBP1-225ENST00000600733 DOK3Q7L591 496 aa17.82■□□□□ 0.44
SHKBP1-225ENST00000600733 TMEM17Q86X19 198 aa17.82■□□□□ 0.44
SHKBP1-225ENST00000600733 FAM219AQ8IW50 185 aa17.82■□□□□ 0.44
SHKBP1-225ENST00000600733 BHLHE23Q8NDY6 225 aa17.82■□□□□ 0.44
SHKBP1-225ENST00000600733 RRNAD1Q96FB5 475 aaKnown RBP17.82■□□□□ 0.44
SHKBP1-225ENST00000600733 RNF126Q9BV68 326 aa17.82■□□□□ 0.44
SHKBP1-225ENST00000600733 DEFB126Q9BYW3 111 aa17.82■□□□□ 0.44
SHKBP1-225ENST00000600733 IGHV5-10-1A0A0J9YXX1 117 aa17.81■□□□□ 0.44
SHKBP1-225ENST00000600733 AQP7P3A6NL99 342 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms