RNA–Protein interactions for RNA: ENST00000600659.2

RPS28-203, Transcript of ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS28, Length 1,326 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-203ENST00000600659 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.23□□□□□ -0.29
RPS28-203ENST00000600659 PPP1R14AQ96A00 147 aa13.23□□□□□ -0.29
RPS28-203ENST00000600659 RNF166Q96A37 237 aaPredicted RBP13.23□□□□□ -0.29
RPS28-203ENST00000600659 TIMD4Q96H15 378 aa13.23□□□□□ -0.29
RPS28-203ENST00000600659 APOL4Q9BPW4 351 aa13.23□□□□□ -0.29
RPS28-203ENST00000600659 MROQ9BYG7 248 aa13.23□□□□□ -0.29
RPS28-203ENST00000600659 FGF23Q9GZV9 251 aaPredicted RBP13.23□□□□□ -0.29
RPS28-203ENST00000600659 RGCCQ9H4X1 137 aa13.23□□□□□ -0.29
RPS28-203ENST00000600659 SP140LQ9H930 580 aa13.23□□□□□ -0.29
RPS28-203ENST00000600659 G6PC2Q9NQR9 355 aa13.23□□□□□ -0.29
RPS28-203ENST00000600659 H2AFY2Q9P0M6 372 aaPredicted RBP13.23□□□□□ -0.29
RPS28-203ENST00000600659 KCNS2Q9ULS6 477 aa13.23□□□□□ -0.29
RPS28-203ENST00000600659 A0A1W2PQL4 384 aaPredicted RBP13.22□□□□□ -0.29
RPS28-203ENST00000600659 F5H0A9 414 aaPredicted RBP13.22□□□□□ -0.29
RPS28-203ENST00000600659 FAM20BO75063 409 aa13.22□□□□□ -0.29
RPS28-203ENST00000600659 ZNF254O75437 659 aa13.22□□□□□ -0.29
RPS28-203ENST00000600659 BAG2O95816 211 aa13.22□□□□□ -0.29
RPS28-203ENST00000600659 TTRP02766 147 aa13.22□□□□□ -0.29
RPS28-203ENST00000600659 MSMBP08118 114 aa13.22□□□□□ -0.29
RPS28-203ENST00000600659 RIDAP52758 137 aaKnown RBP13.22□□□□□ -0.29
RPS28-203ENST00000600659 ISL1P61371 349 aa13.22□□□□□ -0.29
RPS28-203ENST00000600659 ZNF85Q03923 595 aa13.22□□□□□ -0.29
RPS28-203ENST00000600659 EGR3Q06889 387 aa13.22□□□□□ -0.29
RPS28-203ENST00000600659 TMED1Q13445 227 aa13.22□□□□□ -0.29
RPS28-203ENST00000600659 OCLNQ16625 522 aa13.22□□□□□ -0.29
RPS28-203ENST00000600659 CR1LQ2VPA4 569 aa13.22□□□□□ -0.29
RPS28-203ENST00000600659 TMEM155Q4W5P6 130 aa13.22□□□□□ -0.29
RPS28-203ENST00000600659 IL17RELQ6ZVW7 336 aa13.22□□□□□ -0.29
RPS28-203ENST00000600659 ENTHD1Q8IYW4 607 aa13.22□□□□□ -0.29
RPS28-203ENST00000600659 GAL3ST1Q99999 423 aa13.22□□□□□ -0.29
RPS28-203ENST00000600659 LPAR2Q9HBW0 351 aa13.22□□□□□ -0.29
RPS28-203ENST00000600659 NUFIP1Q9UHK0 495 aaKnown RBP13.22□□□□□ -0.29
RPS28-203ENST00000600659 RHBDD3Q9Y3P4 386 aa13.22□□□□□ -0.29
RPS28-203ENST00000600659 ORC6Q9Y5N6 252 aa13.22□□□□□ -0.29
RPS28-203ENST00000600659 A0A0U1RQV5 110 aa13.21□□□□□ -0.29
RPS28-203ENST00000600659 TMEM269A0A1B0GVZ9 245 aa13.21□□□□□ -0.29
RPS28-203ENST00000600659 ISPDA4D126 451 aa13.21□□□□□ -0.29
RPS28-203ENST00000600659 ACOD1A6NK06 481 aa13.21□□□□□ -0.29
RPS28-203ENST00000600659 ZNF670-ZNF695F2Z2N8 137 aa13.21□□□□□ -0.29
RPS28-203ENST00000600659 IFNL4K9M1U5 179 aa13.21□□□□□ -0.29
RPS28-203ENST00000600659 PHYHO14832 338 aa13.21□□□□□ -0.29
RPS28-203ENST00000600659 ZNF205O95201 554 aa13.21□□□□□ -0.29
RPS28-203ENST00000600659 OR2T7P0C7T2 308 aa13.21□□□□□ -0.29
RPS28-203ENST00000600659 ANPEPP15144 967 aa13.21□□□□□ -0.29
RPS28-203ENST00000600659 CFL1P23528 166 aaKnown RBP13.21□□□□□ -0.29
RPS28-203ENST00000600659 SEC61A1P61619 476 aaKnown RBP13.21□□□□□ -0.29
RPS28-203ENST00000600659 POU4F2Q12837 409 aa13.21□□□□□ -0.29
RPS28-203ENST00000600659 FAM120AOSQ5T036 256 aa13.21□□□□□ -0.29
RPS28-203ENST00000600659 ZNF771Q7L3S4 317 aaPredicted RBP13.21□□□□□ -0.29
RPS28-203ENST00000600659 KLBQ86Z14 1044 aa13.21□□□□□ -0.29
RPS28-203ENST00000600659 C11orf53Q8IXP5 236 aa13.21□□□□□ -0.29
RPS28-203ENST00000600659 OR2T27Q8NH04 317 aa13.21□□□□□ -0.29
RPS28-203ENST00000600659 APH1BQ8WW43 257 aa13.21□□□□□ -0.29
RPS28-203ENST00000600659 ERGIC1Q969X5 290 aa13.21□□□□□ -0.29
RPS28-203ENST00000600659 ITPKCQ96DU7 683 aa13.21□□□□□ -0.29
RPS28-203ENST00000600659 TBX5Q99593 518 aa13.21□□□□□ -0.29
RPS28-203ENST00000600659 PBOV1Q9GZY1 135 aa13.21□□□□□ -0.29
RPS28-203ENST00000600659 TMEM165Q9HC07 324 aa13.21□□□□□ -0.29
RPS28-203ENST00000600659 UFSP2Q9NUQ7 469 aa13.21□□□□□ -0.29
RPS28-203ENST00000600659 FAM118AQ9NWS6 357 aa13.21□□□□□ -0.29
RPS28-203ENST00000600659 IMPAD1Q9NX62 359 aa13.21□□□□□ -0.29
RPS28-203ENST00000600659 IKZF2Q9UKS7 526 aa13.21□□□□□ -0.29
RPS28-203ENST00000600659 MXRA5Q9NR99 2828 aa13.21□□□□□ -0.29
RPS28-203ENST00000600659 DNHD1Q96M86 4753 aa13.2□□□□□ -0.3
RPS28-203ENST00000600659 CEACAM18A8MTB9 384 aa13.2□□□□□ -0.3
RPS28-203ENST00000600659 SLC16A6O15403 523 aa13.2□□□□□ -0.3
RPS28-203ENST00000600659 PLPP2O43688 288 aa13.2□□□□□ -0.3
RPS28-203ENST00000600659 FSTL3O95633 263 aa13.2□□□□□ -0.3
RPS28-203ENST00000600659 ZFP36P26651 326 aaKnown RBP13.2□□□□□ -0.3
RPS28-203ENST00000600659 PEX2P28328 305 aa13.2□□□□□ -0.3
RPS28-203ENST00000600659 GABPB1Q06547 395 aaPredicted RBP13.2□□□□□ -0.3
RPS28-203ENST00000600659 RCN1Q15293 331 aa13.2□□□□□ -0.3
RPS28-203ENST00000600659 Q6ZSR3 168 aa13.2□□□□□ -0.3
RPS28-203ENST00000600659 PLPP7Q8NBV4 271 aa13.2□□□□□ -0.3
RPS28-203ENST00000600659 HPSE2Q8WWQ2 592 aa13.2□□□□□ -0.3
RPS28-203ENST00000600659 STMN2Q93045 179 aa13.2□□□□□ -0.3
RPS28-203ENST00000600659 TMEM186Q96B77 213 aa13.2□□□□□ -0.3
RPS28-203ENST00000600659 RAB39BQ96DA2 213 aa13.2□□□□□ -0.3
RPS28-203ENST00000600659 PATZ1Q9HBE1 687 aaKnown RBP13.2□□□□□ -0.3
RPS28-203ENST00000600659 ZNF391Q9UJN7 358 aa13.2□□□□□ -0.3
RPS28-203ENST00000600659 CDC42EP3Q9UKI2 254 aa13.2□□□□□ -0.3
RPS28-203ENST00000600659 NOP16Q9Y3C1 178 aaKnown RBP13.2□□□□□ -0.3
RPS28-203ENST00000600659 GMPPBQ9Y5P6 360 aa13.2□□□□□ -0.3
RPS28-203ENST00000600659 R4GMQ9 66 aa13.2□□□□□ -0.3
RPS28-203ENST00000600659 LOC100130705A0A1B0GUX0 176 aa13.19□□□□□ -0.3
RPS28-203ENST00000600659 ANKRD30BLA7E2S9 258 aa13.19□□□□□ -0.3
RPS28-203ENST00000600659 KIAA1324LA8MWY0 1029 aaPredicted RBP13.19□□□□□ -0.3
RPS28-203ENST00000600659 CST4P01036 141 aa13.19□□□□□ -0.3
RPS28-203ENST00000600659 MDH2P40926 338 aaKnown RBP13.19□□□□□ -0.3
RPS28-203ENST00000600659 MTNR1AP48039 350 aa13.19□□□□□ -0.3
RPS28-203ENST00000600659 ZNF829Q3KNS6 432 aaPredicted RBP13.19□□□□□ -0.3
RPS28-203ENST00000600659 CHRFAM7AQ494W8 412 aa13.19□□□□□ -0.3
RPS28-203ENST00000600659 ZNF404Q494X3 552 aa13.19□□□□□ -0.3
RPS28-203ENST00000600659 LPCAT4Q643R3 524 aa13.19□□□□□ -0.3
RPS28-203ENST00000600659 C1orf229Q6ZS94 237 aaPredicted RBP13.19□□□□□ -0.3
RPS28-203ENST00000600659 ZNF826PQ6ZT77 177 aa13.19□□□□□ -0.3
RPS28-203ENST00000600659 PEG10Q86TG7 708 aaKnown RBP13.19□□□□□ -0.3
RPS28-203ENST00000600659 C19orf18Q8NEA5 215 aa13.19□□□□□ -0.3
RPS28-203ENST00000600659 CSNK2A3Q8NEV1 391 aa13.19□□□□□ -0.3
RPS28-203ENST00000600659 OR10H4Q8NGA5 316 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms