RNA–Protein interactions for RNA: ENST00000600137.5

VRK3-219, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 822 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-219ENST00000600137 TSTQ16762 297 aaKnown RBP11.65□□□□□ -0.54
VRK3-219ENST00000600137 TIGD6Q17RP2 521 aa11.65□□□□□ -0.54
VRK3-219ENST00000600137 PCGF3Q3KNV8 242 aa11.65□□□□□ -0.54
VRK3-219ENST00000600137 WDR38Q5JTN6 314 aa11.65□□□□□ -0.54
VRK3-219ENST00000600137 SYS1Q8N2H4 156 aa11.65□□□□□ -0.54
VRK3-219ENST00000600137 BPIFB6Q8NFQ5 453 aa11.65□□□□□ -0.54
VRK3-219ENST00000600137 OR13G1Q8NGZ3 307 aa11.65□□□□□ -0.54
VRK3-219ENST00000600137 OR2G2Q8NGZ5 317 aa11.65□□□□□ -0.54
VRK3-219ENST00000600137 OR51E1Q8TCB6 317 aa11.65□□□□□ -0.54
VRK3-219ENST00000600137 UBASH3BQ8TF42 649 aa11.65□□□□□ -0.54
VRK3-219ENST00000600137 C4orf36Q96KX1 117 aa11.65□□□□□ -0.54
VRK3-219ENST00000600137 TMUB1Q9BVT8 246 aa11.65□□□□□ -0.54
VRK3-219ENST00000600137 OPA3Q9H6K4 179 aa11.65□□□□□ -0.54
VRK3-219ENST00000600137 DLL4Q9NR61 685 aa11.65□□□□□ -0.54
VRK3-219ENST00000600137 TMEM100Q9NV29 134 aa11.65□□□□□ -0.54
VRK3-219ENST00000600137 PAK1IP1Q9NWT1 392 aaPredicted RBP11.65□□□□□ -0.54
VRK3-219ENST00000600137 CNOT2Q9NZN8 540 aaKnown RBP11.65□□□□□ -0.54
VRK3-219ENST00000600137 FRRS1LQ9P0K9 344 aa11.65□□□□□ -0.54
VRK3-219ENST00000600137 GNG8Q9UK08 70 aa11.65□□□□□ -0.54
VRK3-219ENST00000600137 CR1P17927 2039 aa11.64□□□□□ -0.55
VRK3-219ENST00000600137 TRIM64A6NGJ6 449 aa11.64□□□□□ -0.55
VRK3-219ENST00000600137 GGT3PA6NGU5 568 aa11.64□□□□□ -0.55
VRK3-219ENST00000600137 TRIM64BA6NI03 449 aa11.64□□□□□ -0.55
VRK3-219ENST00000600137 SLC1A7O00341 560 aa11.64□□□□□ -0.55
VRK3-219ENST00000600137 CCL1P22362 96 aa11.64□□□□□ -0.55
VRK3-219ENST00000600137 CA6P23280 308 aa11.64□□□□□ -0.55
VRK3-219ENST00000600137 GIFP27352 417 aa11.64□□□□□ -0.55
VRK3-219ENST00000600137 C21orf33P30042 268 aaPredicted RBP11.64□□□□□ -0.55
VRK3-219ENST00000600137 CRYBB2P43320 205 aa11.64□□□□□ -0.55
VRK3-219ENST00000600137 MRPS11P82912 194 aaKnown RBP11.64□□□□□ -0.55
VRK3-219ENST00000600137 MAB21L1Q13394 359 aa11.64□□□□□ -0.55
VRK3-219ENST00000600137 CIARTQ8N365 385 aaPredicted RBP11.64□□□□□ -0.55
VRK3-219ENST00000600137 OR2Z1Q8NG97 314 aa11.64□□□□□ -0.55
VRK3-219ENST00000600137 ELMOD3Q96FG2 381 aa11.64□□□□□ -0.55
VRK3-219ENST00000600137 TMEM80Q96HE8 168 aa11.64□□□□□ -0.55
VRK3-219ENST00000600137 DIRC2Q96SL1 478 aa11.64□□□□□ -0.55
VRK3-219ENST00000600137 ZNF184Q99676 751 aaPredicted RBP11.64□□□□□ -0.55
VRK3-219ENST00000600137 FGF23Q9GZV9 251 aaPredicted RBP11.64□□□□□ -0.55
VRK3-219ENST00000600137 DUSP21Q9H596 190 aa11.64□□□□□ -0.55
VRK3-219ENST00000600137 MOB1AQ9H8S9 216 aa11.64□□□□□ -0.55
VRK3-219ENST00000600137 GPR84Q9NQS5 396 aa11.64□□□□□ -0.55
VRK3-219ENST00000600137 UBAP1Q9NZ09 502 aa11.64□□□□□ -0.55
VRK3-219ENST00000600137 MRPL15Q9P015 296 aaKnown RBP11.64□□□□□ -0.55
VRK3-219ENST00000600137 IL19Q9UHD0 177 aa11.64□□□□□ -0.55
VRK3-219ENST00000600137 ZNF391Q9UJN7 358 aa11.64□□□□□ -0.55
VRK3-219ENST00000600137 RHBDD3Q9Y3P4 386 aa11.64□□□□□ -0.55
VRK3-219ENST00000600137 CACNG2Q9Y698 323 aa11.64□□□□□ -0.55
VRK3-219ENST00000600137 TEP1Q99973 2627 aaKnown RBP11.63□□□□□ -0.55
VRK3-219ENST00000600137 LOC390937A0A1W2PQ73 354 aa11.63□□□□□ -0.55
VRK3-219ENST00000600137 EFCAB10A6NFE3 127 aa11.63□□□□□ -0.55
VRK3-219ENST00000600137 OR4C45A6NMZ5 311 aa11.63□□□□□ -0.55
VRK3-219ENST00000600137 F5H5P2 479 aa11.63□□□□□ -0.55
VRK3-219ENST00000600137 P2RY10O00398 339 aa11.63□□□□□ -0.55
VRK3-219ENST00000600137 DENRO43583 198 aaKnown RBP11.63□□□□□ -0.55
VRK3-219ENST00000600137 PTBP3O95758 552 aaKnown RBP11.63□□□□□ -0.55
VRK3-219ENST00000600137 LALBAP00709 142 aa11.63□□□□□ -0.55
VRK3-219ENST00000600137 MT-ND5P03915 603 aa11.63□□□□□ -0.55
VRK3-219ENST00000600137 TACSTD2P09758 323 aa11.63□□□□□ -0.55
VRK3-219ENST00000600137 CFL1P23528 166 aaKnown RBP11.63□□□□□ -0.55
VRK3-219ENST00000600137 PMELP40967 661 aa11.63□□□□□ -0.55
VRK3-219ENST00000600137 GFOD2Q3B7J2 385 aa11.63□□□□□ -0.55
VRK3-219ENST00000600137 OR2G6Q5TZ20 316 aa11.63□□□□□ -0.55
VRK3-219ENST00000600137 XAF1Q6GPH4 301 aa11.63□□□□□ -0.55
VRK3-219ENST00000600137 RDH10Q8IZV5 341 aa11.63□□□□□ -0.55
VRK3-219ENST00000600137 OR10AD1Q8NGE0 317 aa11.63□□□□□ -0.55
VRK3-219ENST00000600137 OR14K1Q8NGZ2 314 aa11.63□□□□□ -0.55
VRK3-219ENST00000600137 RPS4Y2Q8TD47 263 aa11.63□□□□□ -0.55
VRK3-219ENST00000600137 SPRYD4Q8WW59 207 aaPredicted RBP11.63□□□□□ -0.55
VRK3-219ENST00000600137 ITLN1Q8WWA0 313 aa11.63□□□□□ -0.55
VRK3-219ENST00000600137 RDH5Q92781 318 aa11.63□□□□□ -0.55
VRK3-219ENST00000600137 MEGF10Q96KG7 1140 aa11.63□□□□□ -0.55
VRK3-219ENST00000600137 DCAF16Q9NXF7 216 aa11.63□□□□□ -0.55
VRK3-219ENST00000600137 CAB39Q9Y376 341 aaPredicted RBP11.63□□□□□ -0.55
VRK3-219ENST00000600137 SIRT4Q9Y6E7 314 aaPredicted RBP11.63□□□□□ -0.55
VRK3-219ENST00000600137 V9GYS6 101 aa11.63□□□□□ -0.55
VRK3-219ENST00000600137 LOC100289279A0A1B0GTE1 492 aa11.62□□□□□ -0.55
VRK3-219ENST00000600137 IRGMA1A4Y4 181 aa11.62□□□□□ -0.55
VRK3-219ENST00000600137 CST4P01036 141 aa11.62□□□□□ -0.55
VRK3-219ENST00000600137 CCDC159P0C7I6 412 aa11.62□□□□□ -0.55
VRK3-219ENST00000600137 ATP6V1B1P15313 513 aa11.62□□□□□ -0.55
VRK3-219ENST00000600137 CD200P41217 278 aa11.62□□□□□ -0.55
VRK3-219ENST00000600137 PDLIM4P50479 330 aa11.62□□□□□ -0.55
VRK3-219ENST00000600137 CCR9P51686 369 aa11.62□□□□□ -0.55
VRK3-219ENST00000600137 GTF2A1P52655 376 aaPredicted RBP11.62□□□□□ -0.55
VRK3-219ENST00000600137 DSCR9P59020 149 aa11.62□□□□□ -0.55
VRK3-219ENST00000600137 ACTA2P62736 377 aa11.62□□□□□ -0.55
VRK3-219ENST00000600137 ACTG2P63267 376 aa11.62□□□□□ -0.55
VRK3-219ENST00000600137 CSNK2BP67870 215 aa11.62□□□□□ -0.55
VRK3-219ENST00000600137 SLC35A2P78381 396 aa11.62□□□□□ -0.55
VRK3-219ENST00000600137 TNFAIP6P98066 277 aaPredicted RBP11.62□□□□□ -0.55
VRK3-219ENST00000600137 ZMAT1Q5H9K5 638 aa11.62□□□□□ -0.55
VRK3-219ENST00000600137 BCL2L15Q5TBC7 163 aa11.62□□□□□ -0.55
VRK3-219ENST00000600137 RNLSQ5VYX0 342 aa11.62□□□□□ -0.55
VRK3-219ENST00000600137 AHSA2Q719I0 299 aa11.62□□□□□ -0.55
VRK3-219ENST00000600137 FAM168AQ92567 244 aa11.62□□□□□ -0.55
VRK3-219ENST00000600137 DVL3Q92997 716 aaPredicted RBP11.62□□□□□ -0.55
VRK3-219ENST00000600137 ITFG2Q969R8 447 aa11.62□□□□□ -0.55
VRK3-219ENST00000600137 OR2V2Q96R30 315 aa11.62□□□□□ -0.55
VRK3-219ENST00000600137 MYOZ1Q9NP98 299 aaPredicted RBP11.62□□□□□ -0.55
VRK3-219ENST00000600137 EXOSC1Q9Y3B2 195 aaKnown RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms