RNA–Protein interactions for RNA: ENST00000599833.1

SHKBP1-221, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 761 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-221ENST00000599833 FBLIM1Q8WUP2 373 aa16.46■□□□□ 0.23
SHKBP1-221ENST00000599833 SPRYD4Q8WW59 207 aaPredicted RBP16.46■□□□□ 0.23
SHKBP1-221ENST00000599833 DVL3Q92997 716 aaPredicted RBP16.46■□□□□ 0.23
SHKBP1-221ENST00000599833 ADI1Q9BV57 179 aa16.46■□□□□ 0.23
SHKBP1-221ENST00000599833 EGLN1Q9GZT9 426 aa16.46■□□□□ 0.23
SHKBP1-221ENST00000599833 FGF23Q9GZV9 251 aaPredicted RBP16.46■□□□□ 0.23
SHKBP1-221ENST00000599833 RGCCQ9H4X1 137 aa16.46■□□□□ 0.23
SHKBP1-221ENST00000599833 IKZF2Q9UKS7 526 aa16.46■□□□□ 0.23
SHKBP1-221ENST00000599833 MYRFQ9Y2G1 1151 aa16.46■□□□□ 0.23
SHKBP1-221ENST00000599833 R4GMQ9 66 aa16.46■□□□□ 0.23
SHKBP1-221ENST00000599833 HIVEP2P31629 2446 aa16.46■□□□□ 0.23
SHKBP1-221ENST00000599833 GGT3PA6NGU5 568 aa16.45■□□□□ 0.22
SHKBP1-221ENST00000599833 IGHA1P01876 353 aa16.45■□□□□ 0.22
SHKBP1-221ENST00000599833 GPR6P46095 362 aaPredicted RBP16.45■□□□□ 0.22
SHKBP1-221ENST00000599833 LIPNQ5VXI9 398 aa16.45■□□□□ 0.22
SHKBP1-221ENST00000599833 WDR86Q86TI4 376 aa16.45■□□□□ 0.22
SHKBP1-221ENST00000599833 PLPP7Q8NBV4 271 aa16.45■□□□□ 0.22
SHKBP1-221ENST00000599833 ZNF555Q8NEP9 628 aa16.45■□□□□ 0.22
SHKBP1-221ENST00000599833 CLDND2Q8NHS1 167 aa16.45■□□□□ 0.22
SHKBP1-221ENST00000599833 CNIH3Q8TBE1 160 aa16.45■□□□□ 0.22
SHKBP1-221ENST00000599833 RORBQ92753 470 aa16.45■□□□□ 0.22
SHKBP1-221ENST00000599833 AMBNQ9NP70 447 aa16.45■□□□□ 0.22
SHKBP1-221ENST00000599833 WIPI2Q9Y4P8 454 aa16.45■□□□□ 0.22
SHKBP1-221ENST00000599833 A0A1B0GTI1 187 aa16.44■□□□□ 0.22
SHKBP1-221ENST00000599833 METTL15A6NJ78 407 aa16.44■□□□□ 0.22
SHKBP1-221ENST00000599833 H0YAE9 185 aa16.44■□□□□ 0.22
SHKBP1-221ENST00000599833 TPD52L2O43399 206 aaKnown RBP16.44■□□□□ 0.22
SHKBP1-221ENST00000599833 CD5LO43866 347 aa16.44■□□□□ 0.22
SHKBP1-221ENST00000599833 SULT1C4O75897 302 aa16.44■□□□□ 0.22
SHKBP1-221ENST00000599833 DDOSTP39656 456 aa16.44■□□□□ 0.22
SHKBP1-221ENST00000599833 LMO4P61968 165 aa16.44■□□□□ 0.22
SHKBP1-221ENST00000599833 GFOD2Q3B7J2 385 aa16.44■□□□□ 0.22
SHKBP1-221ENST00000599833 TTC23Q5W5X9 447 aa16.44■□□□□ 0.22
SHKBP1-221ENST00000599833 Q71RC1 249 aaPredicted RBP16.44■□□□□ 0.22
SHKBP1-221ENST00000599833 CATSPERDQ86XM0 798 aa16.44■□□□□ 0.22
SHKBP1-221ENST00000599833 ELMOD2Q8IZ81 293 aa16.44■□□□□ 0.22
SHKBP1-221ENST00000599833 DHRSXQ8N5I4 330 aa16.44■□□□□ 0.22
SHKBP1-221ENST00000599833 CELF2-AS1Q8N7Q2 184 aa16.44■□□□□ 0.22
SHKBP1-221ENST00000599833 ZNF420Q8TAQ5 688 aaPredicted RBP16.44■□□□□ 0.22
SHKBP1-221ENST00000599833 CYGBQ8WWM9 190 aa16.44■□□□□ 0.22
SHKBP1-221ENST00000599833 CCL17Q92583 94 aa16.44■□□□□ 0.22
SHKBP1-221ENST00000599833 ADAT1Q9BUB4 502 aaKnown RBP16.44■□□□□ 0.22
SHKBP1-221ENST00000599833 TMEM106BQ9NUM4 274 aa16.44■□□□□ 0.22
SHKBP1-221ENST00000599833 RHBDD3Q9Y3P4 386 aa16.44■□□□□ 0.22
SHKBP1-221ENST00000599833 NAV3Q8IVL0 2385 aa16.43■□□□□ 0.22
SHKBP1-221ENST00000599833 PPIHO43447 177 aaKnown RBP16.43■□□□□ 0.22
SHKBP1-221ENST00000599833 GMDSO60547 372 aa16.43■□□□□ 0.22
SHKBP1-221ENST00000599833 IGHV2-70P01814 119 aa16.43■□□□□ 0.22
SHKBP1-221ENST00000599833 TNFRSF1AP19438 455 aa16.43■□□□□ 0.22
SHKBP1-221ENST00000599833 TNFSF4P23510 183 aa16.43■□□□□ 0.22
SHKBP1-221ENST00000599833 CFL1P23528 166 aaKnown RBP16.43■□□□□ 0.22
SHKBP1-221ENST00000599833 CAPGP40121 348 aa16.43■□□□□ 0.22
SHKBP1-221ENST00000599833 IL5RAQ01344 420 aa16.43■□□□□ 0.22
SHKBP1-221ENST00000599833 MPPED2Q15777 294 aa16.43■□□□□ 0.22
SHKBP1-221ENST00000599833 HFEQ30201 348 aa16.43■□□□□ 0.22
SHKBP1-221ENST00000599833 ZNF829Q3KNS6 432 aaPredicted RBP16.43■□□□□ 0.22
SHKBP1-221ENST00000599833 TP53I3Q53FA7 332 aa16.43■□□□□ 0.22
SHKBP1-221ENST00000599833 AVPI1Q5T686 147 aa16.43■□□□□ 0.22
SHKBP1-221ENST00000599833 PRSS35Q8N3Z0 413 aa16.43■□□□□ 0.22
SHKBP1-221ENST00000599833 OR52I1Q8NGK6 324 aa16.43■□□□□ 0.22
SHKBP1-221ENST00000599833 OR51E1Q8TCB6 317 aa16.43■□□□□ 0.22
SHKBP1-221ENST00000599833 TFAP2CQ92754 450 aa16.43■□□□□ 0.22
SHKBP1-221ENST00000599833 MOB1AQ9H8S9 216 aa16.43■□□□□ 0.22
SHKBP1-221ENST00000599833 GPR84Q9NQS5 396 aa16.43■□□□□ 0.22
SHKBP1-221ENST00000599833 ACOXLQ9NUZ1 547 aa16.43■□□□□ 0.22
SHKBP1-221ENST00000599833 ZNF391Q9UJN7 358 aa16.43■□□□□ 0.22
SHKBP1-221ENST00000599833 SLC22A13Q9Y226 551 aa16.43■□□□□ 0.22
SHKBP1-221ENST00000599833 IGHV3-64DA0A0J9YX35 117 aa16.42■□□□□ 0.22
SHKBP1-221ENST00000599833 CLDN25C9JDP6 229 aa16.42■□□□□ 0.22
SHKBP1-221ENST00000599833 TMEM178BH3BS89 294 aa16.42■□□□□ 0.22
SHKBP1-221ENST00000599833 FAM20BO75063 409 aa16.42■□□□□ 0.22
SHKBP1-221ENST00000599833 CST4P01036 141 aa16.42■□□□□ 0.22
SHKBP1-221ENST00000599833 KRT8P05787 483 aa16.42■□□□□ 0.22
SHKBP1-221ENST00000599833 CCL1P22362 96 aa16.42■□□□□ 0.22
SHKBP1-221ENST00000599833 HOXA4Q00056 320 aaPredicted RBP16.42■□□□□ 0.22
SHKBP1-221ENST00000599833 RAB40BQ12829 278 aa16.42■□□□□ 0.22
SHKBP1-221ENST00000599833 IL18R1Q13478 541 aa16.42■□□□□ 0.22
SHKBP1-221ENST00000599833 OR8G1Q15617 311 aa16.42■□□□□ 0.22
SHKBP1-221ENST00000599833 ZNF181Q2M3W8 571 aa16.42■□□□□ 0.22
SHKBP1-221ENST00000599833 PRAMEF6Q5VXH4 476 aa16.42■□□□□ 0.22
SHKBP1-221ENST00000599833 C11orf53Q8IXP5 236 aa16.42■□□□□ 0.22
SHKBP1-221ENST00000599833 Q8TCH9 128 aa16.42■□□□□ 0.22
SHKBP1-221ENST00000599833 HPSE2Q8WWQ2 592 aa16.42■□□□□ 0.22
SHKBP1-221ENST00000599833 MSI2Q96DH6 328 aaKnown RBP16.42■□□□□ 0.22
SHKBP1-221ENST00000599833 Q96MT0 163 aa16.42■□□□□ 0.22
SHKBP1-221ENST00000599833 JAM3Q9BX67 310 aa16.42■□□□□ 0.22
SHKBP1-221ENST00000599833 SLC22A4Q9H015 551 aa16.42■□□□□ 0.22
SHKBP1-221ENST00000599833 OR52A1Q9UKL2 312 aa16.42■□□□□ 0.22
SHKBP1-221ENST00000599833 LOC110117498-PIK3R3F6TDL0 507 aa16.41■□□□□ 0.22
SHKBP1-221ENST00000599833 KIR3DL2P43630 455 aa16.41■□□□□ 0.22
SHKBP1-221ENST00000599833 SRP9P49458 86 aaKnown RBP16.41■□□□□ 0.22
SHKBP1-221ENST00000599833 CHN2P52757 468 aa16.41■□□□□ 0.22
SHKBP1-221ENST00000599833 AQP4P55087 323 aa16.41■□□□□ 0.22
SHKBP1-221ENST00000599833 OR12D2P58182 307 aa16.41■□□□□ 0.22
SHKBP1-221ENST00000599833 NANOS3P60323 173 aaKnown RBP16.41■□□□□ 0.22
SHKBP1-221ENST00000599833 ACTC1P68032 377 aa16.41■□□□□ 0.22
SHKBP1-221ENST00000599833 ACTA1P68133 377 aa16.41■□□□□ 0.22
SHKBP1-221ENST00000599833 MVKQ03426 396 aa16.41■□□□□ 0.22
SHKBP1-221ENST00000599833 WDR38Q5JTN6 314 aa16.41■□□□□ 0.22
SHKBP1-221ENST00000599833 MOGAT3Q86VF5 341 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms