RNA–Protein interactions for RNA: ENST00000599454.5

PNKP-212, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-212ENST00000599454 SLC36A1Q7Z2H8 476 aa17.43■□□□□ 0.38
PNKP-212ENST00000599454 ZDHHC21Q8IVQ6 265 aa17.43■□□□□ 0.38
PNKP-212ENST00000599454 LY6G5BQ8NDX9 201 aa17.43■□□□□ 0.38
PNKP-212ENST00000599454 OR8S1Q8NH09 359 aa17.43■□□□□ 0.38
PNKP-212ENST00000599454 SPSB4Q96A44 273 aa17.43■□□□□ 0.38
PNKP-212ENST00000599454 MCUR1Q96AQ8 359 aa17.43■□□□□ 0.38
PNKP-212ENST00000599454 CMTM5Q96DZ9 223 aa17.43■□□□□ 0.38
PNKP-212ENST00000599454 DDOQ99489 341 aa17.43■□□□□ 0.38
PNKP-212ENST00000599454 IGHV3OR15-7A0A075B7D8 119 aa17.42■□□□□ 0.38
PNKP-212ENST00000599454 TIPRLO75663 272 aa17.42■□□□□ 0.38
PNKP-212ENST00000599454 RPS27P42677 84 aaKnown RBP17.42■□□□□ 0.38
PNKP-212ENST00000599454 TAF13Q15543 124 aa17.42■□□□□ 0.38
PNKP-212ENST00000599454 PCK2Q16822 640 aa17.42■□□□□ 0.38
PNKP-212ENST00000599454 DCXRQ7Z4W1 244 aa17.42■□□□□ 0.38
PNKP-212ENST00000599454 LRRC29Q8WV35 223 aa17.42■□□□□ 0.38
PNKP-212ENST00000599454 C12orf43Q96C57 262 aaKnown RBP17.42■□□□□ 0.38
PNKP-212ENST00000599454 ZNRD1Q9P1U0 126 aa17.42■□□□□ 0.38
PNKP-212ENST00000599454 VPREB3Q9UKI3 123 aa17.42■□□□□ 0.38
PNKP-212ENST00000599454 CDH10Q9Y6N8 788 aa17.42■□□□□ 0.38
PNKP-212ENST00000599454 COMMD3-BMI1R4GMX3 469 aa17.42■□□□□ 0.38
PNKP-212ENST00000599454 PLXNB1O43157 2135 aa17.41■□□□□ 0.38
PNKP-212ENST00000599454 C5orf63A6NC05 138 aa17.41■□□□□ 0.38
PNKP-212ENST00000599454 TVP23AA6NH52 213 aa17.41■□□□□ 0.38
PNKP-212ENST00000599454 TSPAN9O75954 239 aa17.41■□□□□ 0.38
PNKP-212ENST00000599454 TSPAN15O95858 294 aa17.41■□□□□ 0.38
PNKP-212ENST00000599454 ANOS1P23352 680 aa17.41■□□□□ 0.38
PNKP-212ENST00000599454 EEF1B2P24534 225 aaKnown RBP17.41■□□□□ 0.38
PNKP-212ENST00000599454 TGFBR2P37173 567 aa17.41■□□□□ 0.38
PNKP-212ENST00000599454 PRKXP51817 358 aa17.41■□□□□ 0.38
PNKP-212ENST00000599454 C11orf53Q8IXP5 236 aa17.41■□□□□ 0.38
PNKP-212ENST00000599454 PDZD9Q8IXQ8 264 aa17.41■□□□□ 0.38
PNKP-212ENST00000599454 LNX2Q8N448 690 aa17.41■□□□□ 0.38
PNKP-212ENST00000599454 SLAMF6Q96DU3 332 aa17.41■□□□□ 0.38
PNKP-212ENST00000599454 ADA2Q9NZK5 511 aa17.41■□□□□ 0.38
PNKP-212ENST00000599454 ONECUT1Q9UBC0 465 aa17.41■□□□□ 0.38
PNKP-212ENST00000599454 MAGEL2Q9UJ55 1249 aa17.41■□□□□ 0.38
PNKP-212ENST00000599454 V9GYQ6 96 aa17.41■□□□□ 0.38
PNKP-212ENST00000599454 ZNF878C9JN71 531 aa17.4■□□□□ 0.38
PNKP-212ENST00000599454 RRM2P31350 389 aa17.4■□□□□ 0.38
PNKP-212ENST00000599454 NAA10P41227 235 aaPredicted RBP17.4■□□□□ 0.38
PNKP-212ENST00000599454 ENTPD1P49961 510 aa17.4■□□□□ 0.38
PNKP-212ENST00000599454 POU4F2Q12837 409 aa17.4■□□□□ 0.38
PNKP-212ENST00000599454 WDR38Q5JTN6 314 aa17.4■□□□□ 0.38
PNKP-212ENST00000599454 TEX30Q5JUR7 227 aa17.4■□□□□ 0.38
PNKP-212ENST00000599454 PGBD2Q6P3X8 592 aa17.4■□□□□ 0.38
PNKP-212ENST00000599454 DPY19L4Q7Z388 723 aa17.4■□□□□ 0.38
PNKP-212ENST00000599454 GALNT4Q8N4A0 578 aa17.4■□□□□ 0.38
PNKP-212ENST00000599454 CYB561A3Q8NBI2 242 aa17.4■□□□□ 0.38
PNKP-212ENST00000599454 OR1M1Q8NGA1 313 aa17.4■□□□□ 0.38
PNKP-212ENST00000599454 CCL13Q99616 98 aa17.4■□□□□ 0.38
PNKP-212ENST00000599454 SP140LQ9H930 580 aa17.4■□□□□ 0.38
PNKP-212ENST00000599454 CENPMQ9NSP4 180 aa17.4■□□□□ 0.38
PNKP-212ENST00000599454 PRPF19Q9UMS4 504 aaKnown RBP17.4■□□□□ 0.38
PNKP-212ENST00000599454 NDUFB3O43676 98 aa17.39■□□□□ 0.37
PNKP-212ENST00000599454 FABP3P05413 133 aa17.39■□□□□ 0.37
PNKP-212ENST00000599454 SPARCP09486 303 aa17.39■□□□□ 0.37
PNKP-212ENST00000599454 SLC2A1P11166 492 aa17.39■□□□□ 0.37
PNKP-212ENST00000599454 FMO3P31513 532 aa17.39■□□□□ 0.37
PNKP-212ENST00000599454 SLC15A1P46059 708 aa17.39■□□□□ 0.37
PNKP-212ENST00000599454 GRB2P62993 217 aaKnown RBP17.39■□□□□ 0.37
PNKP-212ENST00000599454 SNCBQ16143 134 aa17.39■□□□□ 0.37
PNKP-212ENST00000599454 WDR82Q6UXN9 313 aa17.39■□□□□ 0.37
PNKP-212ENST00000599454 OR5R1Q8NH85 324 aa17.39■□□□□ 0.37
PNKP-212ENST00000599454 TOR3AQ9H497 397 aa17.39■□□□□ 0.37
PNKP-212ENST00000599454 EGLN3Q9H6Z9 239 aa17.39■□□□□ 0.37
PNKP-212ENST00000599454 N6AMT1Q9Y5N5 214 aa17.39■□□□□ 0.37
PNKP-212ENST00000599454 APOC1P02654 83 aa17.38■□□□□ 0.37
PNKP-212ENST00000599454 PSKH1P11801 424 aa17.38■□□□□ 0.37
PNKP-212ENST00000599454 CFL1P23528 166 aaKnown RBP17.38■□□□□ 0.37
PNKP-212ENST00000599454 PRDX6P30041 224 aa17.38■□□□□ 0.37
PNKP-212ENST00000599454 FAM3AP98173 230 aa17.38■□□□□ 0.37
PNKP-212ENST00000599454 TIGD6Q17RP2 521 aa17.38■□□□□ 0.37
PNKP-212ENST00000599454 LRRC10Q5BKY1 277 aa17.38■□□□□ 0.37
PNKP-212ENST00000599454 LYPD4Q6UWN0 246 aa17.38■□□□□ 0.37
PNKP-212ENST00000599454 SLC16A9Q7RTY1 509 aa17.38■□□□□ 0.37
PNKP-212ENST00000599454 WDR86Q86TI4 376 aa17.38■□□□□ 0.37
PNKP-212ENST00000599454 LINC00471Q8N535 108 aa17.38■□□□□ 0.37
PNKP-212ENST00000599454 RNF148Q8N7C7 305 aa17.38■□□□□ 0.37
PNKP-212ENST00000599454 SLC37A3Q8NCC5 494 aa17.38■□□□□ 0.37
PNKP-212ENST00000599454 OR51L1Q8NGJ5 315 aa17.38■□□□□ 0.37
PNKP-212ENST00000599454 C8orf46Q8TAG6 207 aa17.38■□□□□ 0.37
PNKP-212ENST00000599454 ZNRF4Q8WWF5 429 aa17.38■□□□□ 0.37
PNKP-212ENST00000599454 DCTN5Q9BTE1 182 aa17.38■□□□□ 0.37
PNKP-212ENST00000599454 DNTTIP1Q9H147 329 aa17.38■□□□□ 0.37
PNKP-212ENST00000599454 IL1RAPQ9NPH3 570 aa17.38■□□□□ 0.37
PNKP-212ENST00000599454 SIRT7Q9NRC8 400 aa17.38■□□□□ 0.37
PNKP-212ENST00000599454 IL20Q9NYY1 176 aa17.38■□□□□ 0.37
PNKP-212ENST00000599454 ZNF816-ZNF321PA0A0X1KG74 233 aa17.37■□□□□ 0.37
PNKP-212ENST00000599454 A0A1B0GW55 424 aa17.37■□□□□ 0.37
PNKP-212ENST00000599454 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP17.37■□□□□ 0.37
PNKP-212ENST00000599454 ZNF593O00488 134 aaPredicted RBP17.37■□□□□ 0.37
PNKP-212ENST00000599454 NPFFO15130 113 aa17.37■□□□□ 0.37
PNKP-212ENST00000599454 TBX1O43435 398 aa17.37■□□□□ 0.37
PNKP-212ENST00000599454 KRT36O76013 467 aa17.37■□□□□ 0.37
PNKP-212ENST00000599454 DUX4L2P0CJ85 424 aa17.37■□□□□ 0.37
PNKP-212ENST00000599454 DUX4L3P0CJ86 424 aa17.37■□□□□ 0.37
PNKP-212ENST00000599454 DUX4L4P0CJ87 422 aa17.37■□□□□ 0.37
PNKP-212ENST00000599454 DUX4L5P0CJ88 424 aa17.37■□□□□ 0.37
PNKP-212ENST00000599454 DUX4L6P0CJ89 424 aa17.37■□□□□ 0.37
PNKP-212ENST00000599454 DUX4L7P0CJ90 424 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms