RNA–Protein interactions for RNA: ENST00000598471.1

UPF1-206, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-206ENST00000598471 CCDC59Q9P031 241 aaKnown RBP13.33□□□□□ -0.28
UPF1-206ENST00000598471 PIGLQ9Y2B2 252 aa13.33□□□□□ -0.28
UPF1-206ENST00000598471 TUBAL3A6NHL2 446 aa13.32□□□□□ -0.28
UPF1-206ENST00000598471 OCMP0CE72 109 aaPredicted RBP13.32□□□□□ -0.28
UPF1-206ENST00000598471 SELEP16581 610 aa13.32□□□□□ -0.28
UPF1-206ENST00000598471 ZNF182P17025 639 aaPredicted RBP13.32□□□□□ -0.28
UPF1-206ENST00000598471 RAB3BP20337 219 aa13.32□□□□□ -0.28
UPF1-206ENST00000598471 CALCRP30988 508 aa13.32□□□□□ -0.28
UPF1-206ENST00000598471 DDOSTP39656 456 aa13.32□□□□□ -0.28
UPF1-206ENST00000598471 RORCP51449 518 aa13.32□□□□□ -0.28
UPF1-206ENST00000598471 PSMD7P51665 324 aa13.32□□□□□ -0.28
UPF1-206ENST00000598471 TFF3Q07654 80 aa13.32□□□□□ -0.28
UPF1-206ENST00000598471 CDSNQ15517 529 aa13.32□□□□□ -0.28
UPF1-206ENST00000598471 FBXW12Q6X9E4 464 aa13.32□□□□□ -0.28
UPF1-206ENST00000598471 CROCCP3Q8IVE0 287 aa13.32□□□□□ -0.28
UPF1-206ENST00000598471 CSNK2A3Q8NEV1 391 aa13.32□□□□□ -0.28
UPF1-206ENST00000598471 RADILQ96JH8 1075 aa13.32□□□□□ -0.28
UPF1-206ENST00000598471 SOX7Q9BT81 388 aa13.32□□□□□ -0.28
UPF1-206ENST00000598471 ZCCHC4Q9H5U6 513 aa13.32□□□□□ -0.28
UPF1-206ENST00000598471 TAS2R4Q9NYW5 299 aa13.32□□□□□ -0.28
UPF1-206ENST00000598471 ZNF816-ZNF321PA0A0X1KG74 233 aa13.31□□□□□ -0.28
UPF1-206ENST00000598471 MEGF11A6BM72 1044 aa13.31□□□□□ -0.28
UPF1-206ENST00000598471 ANXA2P2A6NMY6 339 aa13.31□□□□□ -0.28
UPF1-206ENST00000598471 LMX1BO60663 402 aa13.31□□□□□ -0.28
UPF1-206ENST00000598471 ERCC1P07992 297 aaPredicted RBP13.31□□□□□ -0.28
UPF1-206ENST00000598471 RAC2P15153 192 aa13.31□□□□□ -0.28
UPF1-206ENST00000598471 FAHP16930 419 aa13.31□□□□□ -0.28
UPF1-206ENST00000598471 RAB3AP20336 220 aa13.31□□□□□ -0.28
UPF1-206ENST00000598471 GCH1P30793 250 aa13.31□□□□□ -0.28
UPF1-206ENST00000598471 RPS19P39019 145 aaKnown RBP13.31□□□□□ -0.28
UPF1-206ENST00000598471 SNTB2Q13425 540 aaKnown RBP13.31□□□□□ -0.28
UPF1-206ENST00000598471 ZNF718Q3SXZ3 478 aa13.31□□□□□ -0.28
UPF1-206ENST00000598471 C22orf34Q6ZV56 151 aa13.31□□□□□ -0.28
UPF1-206ENST00000598471 SLC25A40Q8TBP6 338 aa13.31□□□□□ -0.28
UPF1-206ENST00000598471 SLC25A46Q96AG3 418 aa13.31□□□□□ -0.28
UPF1-206ENST00000598471 ORAI1Q96D31 301 aa13.31□□□□□ -0.28
UPF1-206ENST00000598471 ADAT3Q96EY9 351 aaPredicted RBP13.31□□□□□ -0.28
UPF1-206ENST00000598471 DACH2Q96NX9 599 aa13.31□□□□□ -0.28
UPF1-206ENST00000598471 OR2J1Q9GZK6 312 aa13.31□□□□□ -0.28
UPF1-206ENST00000598471 TPK1Q9H3S4 243 aa13.31□□□□□ -0.28
UPF1-206ENST00000598471 KCNN3Q9UGI6 736 aa13.31□□□□□ -0.28
UPF1-206ENST00000598471 PCNX1Q96RV3 2341 aa13.31□□□□□ -0.28
UPF1-206ENST00000598471 TRAV8-7A0A075B6U6 113 aa13.3□□□□□ -0.28
UPF1-206ENST00000598471 MAGEB3O15480 346 aa13.3□□□□□ -0.28
UPF1-206ENST00000598471 SULT1B1O43704 296 aa13.3□□□□□ -0.28
UPF1-206ENST00000598471 IGFBP3P17936 291 aaPredicted RBP13.3□□□□□ -0.28
UPF1-206ENST00000598471 GRNP28799 593 aaKnown RBP13.3□□□□□ -0.28
UPF1-206ENST00000598471 HNRNPA0Q13151 305 aaKnown RBP13.3□□□□□ -0.28
UPF1-206ENST00000598471 HLXQ14774 488 aaPredicted RBP13.3□□□□□ -0.28
UPF1-206ENST00000598471 BEX5Q5H9J7 111 aa13.3□□□□□ -0.28
UPF1-206ENST00000598471 CEP78Q5JTW2 689 aa13.3□□□□□ -0.28
UPF1-206ENST00000598471 CLVS2Q5SYC1 327 aa13.3□□□□□ -0.28
UPF1-206ENST00000598471 SPATA46Q5T0L3 261 aa13.3□□□□□ -0.28
UPF1-206ENST00000598471 RGS7BPQ6MZT1 257 aaPredicted RBP13.3□□□□□ -0.28
UPF1-206ENST00000598471 UTS2BQ765I0 119 aa13.3□□□□□ -0.28
UPF1-206ENST00000598471 PIAS4Q8N2W9 510 aaPredicted RBP13.3□□□□□ -0.28
UPF1-206ENST00000598471 NKAIN3Q8N8D7 197 aa13.3□□□□□ -0.28
UPF1-206ENST00000598471 OR1M1Q8NGA1 313 aa13.3□□□□□ -0.28
UPF1-206ENST00000598471 OR56B2PQ8NGI1 322 aa13.3□□□□□ -0.28
UPF1-206ENST00000598471 OR13C9Q8NGT0 318 aa13.3□□□□□ -0.28
UPF1-206ENST00000598471 LINC01560Q8TB33 94 aa13.3□□□□□ -0.28
UPF1-206ENST00000598471 AP3S1Q92572 193 aa13.3□□□□□ -0.28
UPF1-206ENST00000598471 TECTBQ96PL2 329 aa13.3□□□□□ -0.28
UPF1-206ENST00000598471 CHST5Q9GZS9 411 aa13.3□□□□□ -0.28
UPF1-206ENST00000598471 POFUT1Q9H488 388 aa13.3□□□□□ -0.28
UPF1-206ENST00000598471 RELNP78509 3460 aa13.29□□□□□ -0.28
UPF1-206ENST00000598471 SHISA3A0PJX4 238 aa13.29□□□□□ -0.28
UPF1-206ENST00000598471 CLEC18AA5D8T8 446 aa13.29□□□□□ -0.28
UPF1-206ENST00000598471 DPRXA6NFQ7 191 aa13.29□□□□□ -0.28
UPF1-206ENST00000598471 ANKRD61A6NGH8 418 aa13.29□□□□□ -0.28
UPF1-206ENST00000598471 ANKRD30BLA7E2S9 258 aa13.29□□□□□ -0.28
UPF1-206ENST00000598471 CD300LBA8K4G0 201 aa13.29□□□□□ -0.28
UPF1-206ENST00000598471 NOTOA8MTQ0 251 aa13.29□□□□□ -0.28
UPF1-206ENST00000598471 ATP6V1G2-DDX39BF2Z307 99 aa13.29□□□□□ -0.28
UPF1-206ENST00000598471 ABCD4O14678 606 aa13.29□□□□□ -0.28
UPF1-206ENST00000598471 MAS1P04201 325 aa13.29□□□□□ -0.28
UPF1-206ENST00000598471 CLEC2LP0C7M8 214 aa13.29□□□□□ -0.28
UPF1-206ENST00000598471 ACKR3P25106 362 aa13.29□□□□□ -0.28
UPF1-206ENST00000598471 BDKRB2P30411 391 aa13.29□□□□□ -0.28
UPF1-206ENST00000598471 GLRXP35754 106 aa13.29□□□□□ -0.28
UPF1-206ENST00000598471 RANBP1P43487 201 aa13.29□□□□□ -0.28
UPF1-206ENST00000598471 BSPH1Q075Z2 132 aa13.29□□□□□ -0.28
UPF1-206ENST00000598471 CNN3Q15417 329 aaKnown RBP13.29□□□□□ -0.28
UPF1-206ENST00000598471 GLT8D1Q68CQ7 371 aa13.29□□□□□ -0.28
UPF1-206ENST00000598471 SLC22A25Q6T423 547 aa13.29□□□□□ -0.28
UPF1-206ENST00000598471 CLEC18BQ6UXF7 455 aa13.29□□□□□ -0.28
UPF1-206ENST00000598471 CLEC18CQ8NCF0 446 aa13.29□□□□□ -0.28
UPF1-206ENST00000598471 NUP37Q8NFH4 326 aa13.29□□□□□ -0.28
UPF1-206ENST00000598471 PIGTQ969N2 578 aa13.29□□□□□ -0.28
UPF1-206ENST00000598471 CMBLQ96DG6 245 aa13.29□□□□□ -0.28
UPF1-206ENST00000598471 CPNE2Q96FN4 548 aaPredicted RBP13.29□□□□□ -0.28
UPF1-206ENST00000598471 MARS2Q96GW9 593 aaKnown RBP13.29□□□□□ -0.28
UPF1-206ENST00000598471 TMEM138Q9NPI0 162 aa13.29□□□□□ -0.28
UPF1-206ENST00000598471 NPDC1Q9NQX5 325 aaPredicted RBP13.29□□□□□ -0.28
UPF1-206ENST00000598471 AK6Q9Y3D8 172 aaKnown RBP13.29□□□□□ -0.28
UPF1-206ENST00000598471 V9GY05 133 aa13.29□□□□□ -0.28
UPF1-206ENST00000598471 HIVEP3Q5T1R4 2406 aa13.28□□□□□ -0.28
UPF1-206ENST00000598471 A6NIN4 97 aa13.28□□□□□ -0.28
UPF1-206ENST00000598471 VSTM5A8MXK1 200 aa13.28□□□□□ -0.28
UPF1-206ENST00000598471 TMEM127O75204 238 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms