RNA–Protein interactions for RNA: ENST00000597618.5

TRIM28-210, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-210ENST00000597618 SPTSSAQ969W0 71 aa8.23□□□□□ -1.09
TRIM28-210ENST00000597618 ZBTB9Q96C00 473 aa8.23□□□□□ -1.09
TRIM28-210ENST00000597618 ZNF799Q96GE5 643 aa8.23□□□□□ -1.09
TRIM28-210ENST00000597618 RCC1LQ96I51 464 aaKnown RBP8.23□□□□□ -1.09
TRIM28-210ENST00000597618 TPD52L3Q96J77 140 aa8.23□□□□□ -1.09
TRIM28-210ENST00000597618 GPX7Q96SL4 187 aaPredicted RBP8.23□□□□□ -1.09
TRIM28-210ENST00000597618 SH3GL1Q99961 368 aa8.23□□□□□ -1.09
TRIM28-210ENST00000597618 NRIP3Q9NQ35 241 aa8.23□□□□□ -1.09
TRIM28-210ENST00000597618 RHCGQ9UBD6 479 aa8.23□□□□□ -1.09
TRIM28-210ENST00000597618 TMEM5Q9Y2B1 443 aa8.23□□□□□ -1.09
TRIM28-210ENST00000597618 IGLV1-36A0A0B4J1U3 117 aa8.22□□□□□ -1.09
TRIM28-210ENST00000597618 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.22□□□□□ -1.09
TRIM28-210ENST00000597618 ANGPTL7O43827 346 aa8.22□□□□□ -1.09
TRIM28-210ENST00000597618 TIPRLO75663 272 aa8.22□□□□□ -1.09
TRIM28-210ENST00000597618 IFNW1P05000 195 aa8.22□□□□□ -1.09
TRIM28-210ENST00000597618 PF4V1P10720 104 aa8.22□□□□□ -1.09
TRIM28-210ENST00000597618 MSX2P35548 267 aaPredicted RBP8.22□□□□□ -1.09
TRIM28-210ENST00000597618 NAA10P41227 235 aaPredicted RBP8.22□□□□□ -1.09
TRIM28-210ENST00000597618 RPS6KA3P51812 740 aa8.22□□□□□ -1.09
TRIM28-210ENST00000597618 CYLC2Q14093 348 aaPredicted RBP8.22□□□□□ -1.09
TRIM28-210ENST00000597618 HABP2Q14520 560 aaPredicted RBP8.22□□□□□ -1.09
TRIM28-210ENST00000597618 SNAI3Q3KNW1 292 aa8.22□□□□□ -1.09
TRIM28-210ENST00000597618 SLC36A3Q495N2 470 aa8.22□□□□□ -1.09
TRIM28-210ENST00000597618 ATPAF1Q5TC12 328 aaPredicted RBP8.22□□□□□ -1.09
TRIM28-210ENST00000597618 STUMQ69YW2 141 aa8.22□□□□□ -1.09
TRIM28-210ENST00000597618 NANOGP8Q6NSW7 305 aa8.22□□□□□ -1.09
TRIM28-210ENST00000597618 PTCHD4Q6ZW05 846 aa8.22□□□□□ -1.09
TRIM28-210ENST00000597618 SLC26A10Q8NG04 563 aa8.22□□□□□ -1.09
TRIM28-210ENST00000597618 OR8J3Q8NGG0 315 aa8.22□□□□□ -1.09
TRIM28-210ENST00000597618 OR56B2PQ8NGI1 322 aa8.22□□□□□ -1.09
TRIM28-210ENST00000597618 OR9Q1Q8NGQ5 310 aa8.22□□□□□ -1.09
TRIM28-210ENST00000597618 OR8S1Q8NH09 359 aa8.22□□□□□ -1.09
TRIM28-210ENST00000597618 OR2AE1Q8NHA4 323 aa8.22□□□□□ -1.09
TRIM28-210ENST00000597618 TSPEARQ8WU66 669 aa8.22□□□□□ -1.09
TRIM28-210ENST00000597618 AJUBAQ96IF1 538 aa8.22□□□□□ -1.09
TRIM28-210ENST00000597618 DNTTIP1Q9H147 329 aa8.22□□□□□ -1.09
TRIM28-210ENST00000597618 OPA3Q9H6K4 179 aa8.22□□□□□ -1.09
TRIM28-210ENST00000597618 PNRC2Q9NPJ4 139 aaKnown RBP8.22□□□□□ -1.09
TRIM28-210ENST00000597618 CYB5R1Q9UHQ9 305 aa8.22□□□□□ -1.09
TRIM28-210ENST00000597618 CAPN7Q9Y6W3 813 aa8.22□□□□□ -1.09
TRIM28-210ENST00000597618 A0A087WUU8 490 aa8.21□□□□□ -1.1
TRIM28-210ENST00000597618 A0A1W2PRX2 142 aa8.21□□□□□ -1.1
TRIM28-210ENST00000597618 MEGF11A6BM72 1044 aa8.21□□□□□ -1.1
TRIM28-210ENST00000597618 ANKRD30BLA7E2S9 258 aa8.21□□□□□ -1.1
TRIM28-210ENST00000597618 H0YAE9 185 aa8.21□□□□□ -1.1
TRIM28-210ENST00000597618 DCTN6O00399 190 aa8.21□□□□□ -1.1
TRIM28-210ENST00000597618 TXNDC12O95881 172 aa8.21□□□□□ -1.1
TRIM28-210ENST00000597618 PF4P02776 101 aa8.21□□□□□ -1.1
TRIM28-210ENST00000597618 ALDOBP05062 364 aa8.21□□□□□ -1.1
TRIM28-210ENST00000597618 SELLP14151 372 aa8.21□□□□□ -1.1
TRIM28-210ENST00000597618 CDKN2AP42771 156 aaKnown RBP8.21□□□□□ -1.1
TRIM28-210ENST00000597618 YAP1P46937 504 aaKnown RBP8.21□□□□□ -1.1
TRIM28-210ENST00000597618 KRTAP10-11P60412 298 aa8.21□□□□□ -1.1
TRIM28-210ENST00000597618 SELENOWP63302 87 aa8.21□□□□□ -1.1
TRIM28-210ENST00000597618 EGFEM1PQ0D2K5 195 aa8.21□□□□□ -1.1
TRIM28-210ENST00000597618 RFX4Q33E94 735 aa8.21□□□□□ -1.1
TRIM28-210ENST00000597618 RABL3Q5HYI8 236 aa8.21□□□□□ -1.1
TRIM28-210ENST00000597618 GLYATL3Q5SZD4 288 aa8.21□□□□□ -1.1
TRIM28-210ENST00000597618 HCP5Q6MZN7 132 aa8.21□□□□□ -1.1
TRIM28-210ENST00000597618 TBPL2Q6SJ96 375 aa8.21□□□□□ -1.1
TRIM28-210ENST00000597618 WDR82Q6UXN9 313 aa8.21□□□□□ -1.1
TRIM28-210ENST00000597618 DPY19L2P2Q6ZN68 376 aa8.21□□□□□ -1.1
TRIM28-210ENST00000597618 RRM2BQ7LG56 351 aa8.21□□□□□ -1.1
TRIM28-210ENST00000597618 DPY19L4Q7Z388 723 aa8.21□□□□□ -1.1
TRIM28-210ENST00000597618 C11orf53Q8IXP5 236 aa8.21□□□□□ -1.1
TRIM28-210ENST00000597618 LNX2Q8N448 690 aa8.21□□□□□ -1.1
TRIM28-210ENST00000597618 OR1M1Q8NGA1 313 aa8.21□□□□□ -1.1
TRIM28-210ENST00000597618 DPF1Q92782 380 aa8.21□□□□□ -1.1
TRIM28-210ENST00000597618 DUS3LQ96G46 650 aaKnown RBP8.21□□□□□ -1.1
TRIM28-210ENST00000597618 MED30Q96HR3 178 aa8.21□□□□□ -1.1
TRIM28-210ENST00000597618 TSSK2Q96PF2 358 aa8.21□□□□□ -1.1
TRIM28-210ENST00000597618 DDOQ99489 341 aa8.21□□□□□ -1.1
TRIM28-210ENST00000597618 CDCA4Q9BXL8 241 aa8.21□□□□□ -1.1
TRIM28-210ENST00000597618 WNT10AQ9GZT5 417 aa8.21□□□□□ -1.1
TRIM28-210ENST00000597618 ADA2Q9NZK5 511 aa8.21□□□□□ -1.1
TRIM28-210ENST00000597618 SLC25A10Q9UBX3 287 aaPredicted RBP8.21□□□□□ -1.1
TRIM28-210ENST00000597618 B9D1Q9UPM9 204 aa8.21□□□□□ -1.1
TRIM28-210ENST00000597618 SIGLEC7Q9Y286 467 aa8.21□□□□□ -1.1
TRIM28-210ENST00000597618 IER3IP1Q9Y5U9 82 aa8.21□□□□□ -1.1
TRIM28-210ENST00000597618 TRBV23-1A0A0A0MS06 115 aa8.2□□□□□ -1.1
TRIM28-210ENST00000597618 VGLL3A8MV65 326 aa8.2□□□□□ -1.1
TRIM28-210ENST00000597618 C3orf84H3BNL1 204 aa8.2□□□□□ -1.1
TRIM28-210ENST00000597618 J3KTA2 159 aa8.2□□□□□ -1.1
TRIM28-210ENST00000597618 FFAR1O14842 300 aa8.2□□□□□ -1.1
TRIM28-210ENST00000597618 PTP4A3O75365 173 aa8.2□□□□□ -1.1
TRIM28-210ENST00000597618 NDUFB7P17568 137 aa8.2□□□□□ -1.1
TRIM28-210ENST00000597618 AMY2BP19961 511 aa8.2□□□□□ -1.1
TRIM28-210ENST00000597618 POU1F1P28069 291 aa8.2□□□□□ -1.1
TRIM28-210ENST00000597618 KDELR2P33947 212 aa8.2□□□□□ -1.1
TRIM28-210ENST00000597618 DDOSTP39656 456 aa8.2□□□□□ -1.1
TRIM28-210ENST00000597618 CAV3P56539 151 aa8.2□□□□□ -1.1
TRIM28-210ENST00000597618 MAGOHP61326 146 aaKnown RBP8.2□□□□□ -1.1
TRIM28-210ENST00000597618 CSNK2BP67870 215 aa8.2□□□□□ -1.1
TRIM28-210ENST00000597618 CNN3Q15417 329 aaKnown RBP8.2□□□□□ -1.1
TRIM28-210ENST00000597618 KLHL22Q53GT1 634 aa8.2□□□□□ -1.1
TRIM28-210ENST00000597618 ARSJQ5FYB0 599 aaPredicted RBP8.2□□□□□ -1.1
TRIM28-210ENST00000597618 DRAM2Q6UX65 266 aa8.2□□□□□ -1.1
TRIM28-210ENST00000597618 WDR86Q86TI4 376 aa8.2□□□□□ -1.1
TRIM28-210ENST00000597618 OR6V1Q8N148 313 aa8.2□□□□□ -1.1
TRIM28-210ENST00000597618 OR5T2Q8NGG2 359 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms