RNA–Protein interactions for RNA: ENST00000596676.2

SMCO4-206, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 BASIC

Gene SMCO4, Length 180 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-206ENST00000596676 ZFPL1O95159 310 aa13.2□□□□□ -0.3
SMCO4-206ENST00000596676 IGHV1-46P01743 117 aa13.2□□□□□ -0.3
SMCO4-206ENST00000596676 CA6P23280 308 aa13.2□□□□□ -0.3
SMCO4-206ENST00000596676 DNASE1P24855 282 aa13.2□□□□□ -0.3
SMCO4-206ENST00000596676 ZNF81P51508 661 aa13.2□□□□□ -0.3
SMCO4-206ENST00000596676 CHN2P52757 468 aa13.2□□□□□ -0.3
SMCO4-206ENST00000596676 GABARAPL2P60520 117 aa13.2□□□□□ -0.3
SMCO4-206ENST00000596676 EMX1Q04741 257 aaPredicted RBP13.2□□□□□ -0.3
SMCO4-206ENST00000596676 CDK5R1Q15078 307 aa13.2□□□□□ -0.3
SMCO4-206ENST00000596676 MED22Q15528 200 aa13.2□□□□□ -0.3
SMCO4-206ENST00000596676 TSTQ16762 297 aaKnown RBP13.2□□□□□ -0.3
SMCO4-206ENST00000596676 CDH24Q86UP0 819 aa13.2□□□□□ -0.3
SMCO4-206ENST00000596676 SPARTQ8N0X7 666 aa13.2□□□□□ -0.3
SMCO4-206ENST00000596676 PLPP7Q8NBV4 271 aa13.2□□□□□ -0.3
SMCO4-206ENST00000596676 OR10AD1Q8NGE0 317 aa13.2□□□□□ -0.3
SMCO4-206ENST00000596676 OR13C5Q8NGS8 318 aa13.2□□□□□ -0.3
SMCO4-206ENST00000596676 RGP1Q92546 391 aaPredicted RBP13.2□□□□□ -0.3
SMCO4-206ENST00000596676 PERPQ96FX8 193 aa13.2□□□□□ -0.3
SMCO4-206ENST00000596676 MND1Q9BWT6 205 aa13.2□□□□□ -0.3
SMCO4-206ENST00000596676 GPR160Q9UJ42 338 aa13.2□□□□□ -0.3
SMCO4-206ENST00000596676 BLOC1S6Q9UL45 172 aa13.2□□□□□ -0.3
SMCO4-206ENST00000596676 LRCH1Q9Y2L9 728 aa13.2□□□□□ -0.3
SMCO4-206ENST00000596676 LOC107986453A0A1B0GWG9 222 aa13.19□□□□□ -0.3
SMCO4-206ENST00000596676 LYNX1G3V0Z9 82 aa13.19□□□□□ -0.3
SMCO4-206ENST00000596676 LYNX1P0DP58 116 aa13.19□□□□□ -0.3
SMCO4-206ENST00000596676 FAHP16930 419 aa13.19□□□□□ -0.3
SMCO4-206ENST00000596676 PTH2RP49190 550 aa13.19□□□□□ -0.3
SMCO4-206ENST00000596676 TGM4P49221 684 aa13.19□□□□□ -0.3
SMCO4-206ENST00000596676 PPOXP50336 477 aa13.19□□□□□ -0.3
SMCO4-206ENST00000596676 CCR9P51686 369 aa13.19□□□□□ -0.3
SMCO4-206ENST00000596676 CCL8P80075 99 aa13.19□□□□□ -0.3
SMCO4-206ENST00000596676 SPHARQ15513 63 aa13.19□□□□□ -0.3
SMCO4-206ENST00000596676 OR8B8Q15620 311 aa13.19□□□□□ -0.3
SMCO4-206ENST00000596676 RPL22L1Q6P5R6 122 aaKnown RBP13.19□□□□□ -0.3
SMCO4-206ENST00000596676 TGIF2LYQ8IUE0 185 aa13.19□□□□□ -0.3
SMCO4-206ENST00000596676 ZNF676Q8N7Q3 588 aa13.19□□□□□ -0.3
SMCO4-206ENST00000596676 OR2Z1Q8NG97 314 aa13.19□□□□□ -0.3
SMCO4-206ENST00000596676 RPS4Y2Q8TD47 263 aa13.19□□□□□ -0.3
SMCO4-206ENST00000596676 SLC30A2Q9BRI3 323 aa13.19□□□□□ -0.3
SMCO4-206ENST00000596676 ACOT13Q9NPJ3 140 aa13.19□□□□□ -0.3
SMCO4-206ENST00000596676 TREM2Q9NZC2 230 aa13.19□□□□□ -0.3
SMCO4-206ENST00000596676 PIGLQ9Y2B2 252 aa13.19□□□□□ -0.3
SMCO4-206ENST00000596676 PMF1-BGLAPU3KQ54 211 aa13.19□□□□□ -0.3
SMCO4-206ENST00000596676 V9GYS6 101 aa13.19□□□□□ -0.3
SMCO4-206ENST00000596676 NOTCH2Q04721 2471 aa13.19□□□□□ -0.3
SMCO4-206ENST00000596676 CHD3Q12873 2000 aaKnown RBP13.18□□□□□ -0.3
SMCO4-206ENST00000596676 NAV2Q8IVL1 2488 aa13.18□□□□□ -0.3
SMCO4-206ENST00000596676 A0A1B0GVI7 797 aa13.18□□□□□ -0.3
SMCO4-206ENST00000596676 PLSCR5A0PG75 271 aa13.18□□□□□ -0.3
SMCO4-206ENST00000596676 TRIM64A6NGJ6 449 aa13.18□□□□□ -0.3
SMCO4-206ENST00000596676 F5H5P2 479 aa13.18□□□□□ -0.3
SMCO4-206ENST00000596676 H7C417 338 aa13.18□□□□□ -0.3
SMCO4-206ENST00000596676 SYT7O43581 403 aa13.18□□□□□ -0.3
SMCO4-206ENST00000596676 IGHV4-39P01824 125 aa13.18□□□□□ -0.3
SMCO4-206ENST00000596676 HPXP02790 462 aa13.18□□□□□ -0.3
SMCO4-206ENST00000596676 HSMCR30P0CW71 290 aa13.18□□□□□ -0.3
SMCO4-206ENST00000596676 SELEP16581 610 aa13.18□□□□□ -0.3
SMCO4-206ENST00000596676 PCMT1P22061 227 aa13.18□□□□□ -0.3
SMCO4-206ENST00000596676 CCL1P22362 96 aa13.18□□□□□ -0.3
SMCO4-206ENST00000596676 DEFB113Q30KQ7 82 aa13.18□□□□□ -0.3
SMCO4-206ENST00000596676 KCTD21Q4G0X4 260 aa13.18□□□□□ -0.3
SMCO4-206ENST00000596676 DMKNQ6E0U4 476 aaPredicted RBP13.18□□□□□ -0.3
SMCO4-206ENST00000596676 ZNF773Q6PK81 442 aa13.18□□□□□ -0.3
SMCO4-206ENST00000596676 OR5AK2Q8NH90 309 aa13.18□□□□□ -0.3
SMCO4-206ENST00000596676 PIGCQ92535 297 aa13.18□□□□□ -0.3
SMCO4-206ENST00000596676 PIGTQ969N2 578 aa13.18□□□□□ -0.3
SMCO4-206ENST00000596676 FGF23Q9GZV9 251 aaPredicted RBP13.18□□□□□ -0.3
SMCO4-206ENST00000596676 RGCCQ9H4X1 137 aa13.18□□□□□ -0.3
SMCO4-206ENST00000596676 OPA3Q9H6K4 179 aa13.18□□□□□ -0.3
SMCO4-206ENST00000596676 TMEM100Q9NV29 134 aa13.18□□□□□ -0.3
SMCO4-206ENST00000596676 ZNF701Q9NV72 531 aaPredicted RBP13.18□□□□□ -0.3
SMCO4-206ENST00000596676 AKAP9Q99996 3911 aa13.18□□□□□ -0.3
SMCO4-206ENST00000596676 ARID1AO14497 2285 aa13.18□□□□□ -0.3
SMCO4-206ENST00000596676 CSMD1Q96PZ7 3565 aa13.17□□□□□ -0.3
SMCO4-206ENST00000596676 ZNF850A8MQ14 1090 aa13.17□□□□□ -0.3
SMCO4-206ENST00000596676 DHRS3O75911 302 aa13.17□□□□□ -0.3
SMCO4-206ENST00000596676 CELP19835 753 aa13.17□□□□□ -0.3
SMCO4-206ENST00000596676 CFL1P23528 166 aaKnown RBP13.17□□□□□ -0.3
SMCO4-206ENST00000596676 MAP2K3P46734 347 aa13.17□□□□□ -0.3
SMCO4-206ENST00000596676 MOGQ16653 247 aa13.17□□□□□ -0.3
SMCO4-206ENST00000596676 TMEM244Q5VVB8 128 aa13.17□□□□□ -0.3
SMCO4-206ENST00000596676 Q6ZSR3 168 aa13.17□□□□□ -0.3
SMCO4-206ENST00000596676 DOK3Q7L591 496 aa13.17□□□□□ -0.3
SMCO4-206ENST00000596676 EGFL6Q8IUX8 553 aa13.17□□□□□ -0.3
SMCO4-206ENST00000596676 SEMA6DQ8NFY4 1073 aa13.17□□□□□ -0.3
SMCO4-206ENST00000596676 GHSRQ92847 366 aa13.17□□□□□ -0.3
SMCO4-206ENST00000596676 FGGYQ96C11 551 aa13.17□□□□□ -0.3
SMCO4-206ENST00000596676 ORAI1Q96D31 301 aa13.17□□□□□ -0.3
SMCO4-206ENST00000596676 ADAT3Q96EY9 351 aaPredicted RBP13.17□□□□□ -0.3
SMCO4-206ENST00000596676 ELMOD3Q96FG2 381 aa13.17□□□□□ -0.3
SMCO4-206ENST00000596676 PGLYRP3Q96LB9 341 aa13.17□□□□□ -0.3
SMCO4-206ENST00000596676 OPALINQ96PE5 141 aa13.17□□□□□ -0.3
SMCO4-206ENST00000596676 MYCBPQ99417 103 aaPredicted RBP13.17□□□□□ -0.3
SMCO4-206ENST00000596676 CXorf56Q9H5V9 222 aa13.17□□□□□ -0.3
SMCO4-206ENST00000596676 TRIM36Q9NQ86 728 aa13.17□□□□□ -0.3
SMCO4-206ENST00000596676 GPR173Q9NS66 373 aa13.17□□□□□ -0.3
SMCO4-206ENST00000596676 CACNG2Q9Y698 323 aa13.17□□□□□ -0.3
SMCO4-206ENST00000596676 ANKRD61A6NGH8 418 aa13.16□□□□□ -0.3
SMCO4-206ENST00000596676 TMEM212A6NML5 194 aa13.16□□□□□ -0.3
SMCO4-206ENST00000596676 ANKRD30BLA7E2S9 258 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms