RNA–Protein interactions for RNA: ENST00000596457.1

LIG1-211, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 792 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-211ENST00000596457 EGR3Q06889 387 aa9.38□□□□□ -0.91
LIG1-211ENST00000596457 TMEM249Q2WGJ8 235 aa9.38□□□□□ -0.91
LIG1-211ENST00000596457 TP53I3Q53FA7 332 aa9.38□□□□□ -0.91
LIG1-211ENST00000596457 SLC25A30Q5SVS4 291 aa9.38□□□□□ -0.91
LIG1-211ENST00000596457 BCL2L15Q5TBC7 163 aa9.38□□□□□ -0.91
LIG1-211ENST00000596457 PRAMEF6Q5VXH4 476 aa9.38□□□□□ -0.91
LIG1-211ENST00000596457 PEG10Q86TG7 708 aaKnown RBP9.38□□□□□ -0.91
LIG1-211ENST00000596457 MOGAT3Q86VF5 341 aa9.38□□□□□ -0.91
LIG1-211ENST00000596457 OR8S1Q8NH09 359 aa9.38□□□□□ -0.91
LIG1-211ENST00000596457 CNIH3Q8TBE1 160 aa9.38□□□□□ -0.91
LIG1-211ENST00000596457 PIGCQ92535 297 aa9.38□□□□□ -0.91
LIG1-211ENST00000596457 RAB1CQ92928 201 aa9.38□□□□□ -0.91
LIG1-211ENST00000596457 SPSB4Q96A44 273 aa9.38□□□□□ -0.91
LIG1-211ENST00000596457 LGALS12Q96DT0 336 aa9.38□□□□□ -0.91
LIG1-211ENST00000596457 TIMD4Q96H15 378 aa9.38□□□□□ -0.91
LIG1-211ENST00000596457 FAM71F1Q96KD3 344 aaPredicted RBP9.38□□□□□ -0.91
LIG1-211ENST00000596457 LYZL4Q96KX0 146 aa9.38□□□□□ -0.91
LIG1-211ENST00000596457 SIGLEC11Q96RL6 698 aa9.38□□□□□ -0.91
LIG1-211ENST00000596457 UFSP2Q9NUQ7 469 aa9.38□□□□□ -0.91
LIG1-211ENST00000596457 FAM206AQ9NX38 181 aa9.38□□□□□ -0.91
LIG1-211ENST00000596457 DCAF16Q9NXF7 216 aa9.38□□□□□ -0.91
LIG1-211ENST00000596457 OR52A1Q9UKL2 312 aa9.38□□□□□ -0.91
LIG1-211ENST00000596457 SLC22A13Q9Y226 551 aa9.38□□□□□ -0.91
LIG1-211ENST00000596457 R4GMQ9 66 aa9.38□□□□□ -0.91
LIG1-211ENST00000596457 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.37□□□□□ -0.91
LIG1-211ENST00000596457 hCG_38984A0A1B0GV85 526 aa9.37□□□□□ -0.91
LIG1-211ENST00000596457 J3QLW9 94 aa9.37□□□□□ -0.91
LIG1-211ENST00000596457 GMDSO60547 372 aa9.37□□□□□ -0.91
LIG1-211ENST00000596457 ZNF205O95201 554 aa9.37□□□□□ -0.91
LIG1-211ENST00000596457 CYB5R3P00387 301 aaPredicted RBP9.37□□□□□ -0.91
LIG1-211ENST00000596457 PNPP00491 289 aa9.37□□□□□ -0.91
LIG1-211ENST00000596457 IGHV4-31P0DP07 118 aa9.37□□□□□ -0.91
LIG1-211ENST00000596457 DBTP11182 482 aaKnown RBP9.37□□□□□ -0.91
LIG1-211ENST00000596457 ZNF19P17023 458 aa9.37□□□□□ -0.91
LIG1-211ENST00000596457 IL2RGP31785 369 aa9.37□□□□□ -0.91
LIG1-211ENST00000596457 GNALP38405 381 aa9.37□□□□□ -0.91
LIG1-211ENST00000596457 DDOSTP39656 456 aa9.37□□□□□ -0.91
LIG1-211ENST00000596457 ADARB1P78563 741 aaKnown RBP9.37□□□□□ -0.91
LIG1-211ENST00000596457 SLC3A1Q07837 685 aa9.37□□□□□ -0.91
LIG1-211ENST00000596457 SMN1Q16637 294 aaKnown RBP9.37□□□□□ -0.91
LIG1-211ENST00000596457 ZNF691Q5VV52 312 aa9.37□□□□□ -0.91
LIG1-211ENST00000596457 CYB5R2Q6BCY4 276 aa9.37□□□□□ -0.91
LIG1-211ENST00000596457 FAM220AQ7Z4H9 259 aa9.37□□□□□ -0.91
LIG1-211ENST00000596457 LHFPL3Q86UP9 236 aa9.37□□□□□ -0.91
LIG1-211ENST00000596457 BOLLQ8N9W6 283 aaKnown RBP9.37□□□□□ -0.91
LIG1-211ENST00000596457 CLDND2Q8NHS1 167 aa9.37□□□□□ -0.91
LIG1-211ENST00000596457 OR51E1Q8TCB6 317 aa9.37□□□□□ -0.91
LIG1-211ENST00000596457 APH1BQ8WW43 257 aa9.37□□□□□ -0.91
LIG1-211ENST00000596457 ADI1Q9BV57 179 aa9.37□□□□□ -0.91
LIG1-211ENST00000596457 PAPOLGQ9BWT3 736 aaKnown RBP9.37□□□□□ -0.91
LIG1-211ENST00000596457 SLC22A4Q9H015 551 aa9.37□□□□□ -0.91
LIG1-211ENST00000596457 PPP1R3EQ9H7J1 279 aa9.37□□□□□ -0.91
LIG1-211ENST00000596457 RNPEPL1Q9HAU8 725 aa9.37□□□□□ -0.91
LIG1-211ENST00000596457 GCM1Q9NP62 436 aa9.37□□□□□ -0.91
LIG1-211ENST00000596457 TMEM106BQ9NUM4 274 aa9.37□□□□□ -0.91
LIG1-211ENST00000596457 EXOGQ9Y2C4 368 aaKnown RBP9.37□□□□□ -0.91
LIG1-211ENST00000596457 RHBDD3Q9Y3P4 386 aa9.37□□□□□ -0.91
LIG1-211ENST00000596457 RPL36Q9Y3U8 105 aaKnown RBP9.37□□□□□ -0.91
LIG1-211ENST00000596457 WIPI2Q9Y4P8 454 aa9.37□□□□□ -0.91
LIG1-211ENST00000596457 PCDHGB1Q9Y5G3 927 aa9.37□□□□□ -0.91
LIG1-211ENST00000596457 SNX5Q9Y5X3 404 aa9.37□□□□□ -0.91
LIG1-211ENST00000596457 COL6A5A8TX70 2615 aa9.37□□□□□ -0.91
LIG1-211ENST00000596457 JMJD1CQ15652 2540 aa9.36□□□□□ -0.91
LIG1-211ENST00000596457 ACOD1A6NK06 481 aa9.36□□□□□ -0.91
LIG1-211ENST00000596457 ZNF850A8MQ14 1090 aa9.36□□□□□ -0.91
LIG1-211ENST00000596457 P2RY10O00398 339 aa9.36□□□□□ -0.91
LIG1-211ENST00000596457 CD5LO43866 347 aa9.36□□□□□ -0.91
LIG1-211ENST00000596457 TACSTD2P09758 323 aa9.36□□□□□ -0.91
LIG1-211ENST00000596457 ZNF16P17020 682 aaPredicted RBP9.36□□□□□ -0.91
LIG1-211ENST00000596457 DCTDP32321 178 aa9.36□□□□□ -0.91
LIG1-211ENST00000596457 CAPGP40121 348 aa9.36□□□□□ -0.91
LIG1-211ENST00000596457 MAP2K3P46734 347 aa9.36□□□□□ -0.91
LIG1-211ENST00000596457 ACTC1P68032 377 aa9.36□□□□□ -0.91
LIG1-211ENST00000596457 ACTA1P68133 377 aa9.36□□□□□ -0.91
LIG1-211ENST00000596457 MAB21L1Q13394 359 aa9.36□□□□□ -0.91
LIG1-211ENST00000596457 LIPNQ5VXI9 398 aa9.36□□□□□ -0.91
LIG1-211ENST00000596457 KCTD8Q6ZWB6 473 aa9.36□□□□□ -0.91
LIG1-211ENST00000596457 THAP5Q7Z6K1 395 aa9.36□□□□□ -0.91
LIG1-211ENST00000596457 SETD9Q8NE22 299 aa9.36□□□□□ -0.91
LIG1-211ENST00000596457 CSNK2A3Q8NEV1 391 aa9.36□□□□□ -0.91
LIG1-211ENST00000596457 NRG4Q8WWG1 115 aa9.36□□□□□ -0.91
LIG1-211ENST00000596457 RGCCQ9H4X1 137 aa9.36□□□□□ -0.91
LIG1-211ENST00000596457 G6PC2Q9NQR9 355 aa9.36□□□□□ -0.91
LIG1-211ENST00000596457 GPR84Q9NQS5 396 aa9.36□□□□□ -0.91
LIG1-211ENST00000596457 UBAP1Q9NZ09 502 aa9.36□□□□□ -0.91
LIG1-211ENST00000596457 MRPL15Q9P015 296 aaKnown RBP9.36□□□□□ -0.91
LIG1-211ENST00000596457 NUFIP1Q9UHK0 495 aaKnown RBP9.36□□□□□ -0.91
LIG1-211ENST00000596457 MYRFQ9Y2G1 1151 aa9.36□□□□□ -0.91
LIG1-211ENST00000596457 NOP16Q9Y3C1 178 aaKnown RBP9.36□□□□□ -0.91
LIG1-211ENST00000596457 NPTNQ9Y639 398 aa9.36□□□□□ -0.91
LIG1-211ENST00000596457 LOC100289279A0A1B0GTE1 492 aa9.35□□□□□ -0.91
LIG1-211ENST00000596457 hCG_1807616A0A1W2PRN6 198 aa9.35□□□□□ -0.91
LIG1-211ENST00000596457 A6NIN4 97 aa9.35□□□□□ -0.91
LIG1-211ENST00000596457 A6NLC8 198 aa9.35□□□□□ -0.91
LIG1-211ENST00000596457 KIAA1324LA8MWY0 1029 aaPredicted RBP9.35□□□□□ -0.91
LIG1-211ENST00000596457 SRSF10O75494 262 aaKnown RBP9.35□□□□□ -0.91
LIG1-211ENST00000596457 WBP4O75554 376 aaKnown RBP9.35□□□□□ -0.91
LIG1-211ENST00000596457 FADS2O95864 444 aaKnown RBP9.35□□□□□ -0.91
LIG1-211ENST00000596457 TGFAP01135 160 aa9.35□□□□□ -0.91
LIG1-211ENST00000596457 TTRP02766 147 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms