RNA–Protein interactions for RNA: ENST00000596136.5

USE1-207, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 1 (best) BASIC

Gene USE1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-207ENST00000596136 ZNF391Q9UJN7 358 aa10.93□□□□□ -0.66
USE1-207ENST00000596136 LAMP5Q9UJQ1 280 aa10.93□□□□□ -0.66
USE1-207ENST00000596136 LRCH1Q9Y2L9 728 aa10.93□□□□□ -0.66
USE1-207ENST00000596136 PPIAL4AQ9Y536 164 aa10.93□□□□□ -0.66
USE1-207ENST00000596136 N6AMT1Q9Y5N5 214 aa10.93□□□□□ -0.66
USE1-207ENST00000596136 TMEM14AQ9Y6G1 99 aa10.93□□□□□ -0.66
USE1-207ENST00000596136 A0A0A6YYJ9 748 aa10.92□□□□□ -0.66
USE1-207ENST00000596136 IGHV3-64DA0A0J9YX35 117 aa10.92□□□□□ -0.66
USE1-207ENST00000596136 RNF212BA8MTL3 300 aa10.92□□□□□ -0.66
USE1-207ENST00000596136 TNFRSF13BO14836 293 aaPredicted RBP10.92□□□□□ -0.66
USE1-207ENST00000596136 ZNF254O75437 659 aa10.92□□□□□ -0.66
USE1-207ENST00000596136 ZNF12P17014 697 aa10.92□□□□□ -0.66
USE1-207ENST00000596136 HCCSP53701 268 aa10.92□□□□□ -0.66
USE1-207ENST00000596136 PSMA6P60900 246 aaKnown RBP10.92□□□□□ -0.66
USE1-207ENST00000596136 SEC61A1P61619 476 aaKnown RBP10.92□□□□□ -0.66
USE1-207ENST00000596136 SCGB2A2Q13296 93 aa10.92□□□□□ -0.66
USE1-207ENST00000596136 SNCBQ16143 134 aa10.92□□□□□ -0.66
USE1-207ENST00000596136 KRTAP24-1Q3LI83 254 aa10.92□□□□□ -0.66
USE1-207ENST00000596136 FAM201AQ5SY85 155 aa10.92□□□□□ -0.66
USE1-207ENST00000596136 LCN1P1Q5VSP4 162 aa10.92□□□□□ -0.66
USE1-207ENST00000596136 NXNL2Q5VZ03 156 aa10.92□□□□□ -0.66
USE1-207ENST00000596136 KCTD18Q6PI47 426 aaPredicted RBP10.92□□□□□ -0.66
USE1-207ENST00000596136 LRRN1Q6UXK5 716 aa10.92□□□□□ -0.66
USE1-207ENST00000596136 CCDC121Q6ZUS5 278 aa10.92□□□□□ -0.66
USE1-207ENST00000596136 PHC2Q8IXK0 858 aa10.92□□□□□ -0.66
USE1-207ENST00000596136 TCEANCQ8N8B7 351 aa10.92□□□□□ -0.66
USE1-207ENST00000596136 DEFB108BQ8NET1 73 aa10.92□□□□□ -0.66
USE1-207ENST00000596136 CSNK2A3Q8NEV1 391 aa10.92□□□□□ -0.66
USE1-207ENST00000596136 DACT3Q96B18 629 aaPredicted RBP10.92□□□□□ -0.66
USE1-207ENST00000596136 PGAM5Q96HS1 289 aa10.92□□□□□ -0.66
USE1-207ENST00000596136 CIB1Q99828 191 aa10.92□□□□□ -0.66
USE1-207ENST00000596136 GABARAPL3Q9BY60 117 aa10.92□□□□□ -0.66
USE1-207ENST00000596136 SEMA6AQ9H2E6 1030 aa10.92□□□□□ -0.66
USE1-207ENST00000596136 METTL17Q9H7H0 456 aaPredicted RBP10.92□□□□□ -0.66
USE1-207ENST00000596136 MMP26Q9NRE1 261 aa10.92□□□□□ -0.66
USE1-207ENST00000596136 UFSP2Q9NUQ7 469 aa10.92□□□□□ -0.66
USE1-207ENST00000596136 C14orf119Q9NWQ9 140 aa10.92□□□□□ -0.66
USE1-207ENST00000596136 RNF7Q9UBF6 113 aa10.92□□□□□ -0.66
USE1-207ENST00000596136 OAZ3Q9UMX2 235 aa10.92□□□□□ -0.66
USE1-207ENST00000596136 LRP12Q9Y561 859 aa10.92□□□□□ -0.66
USE1-207ENST00000596136 LOC105371242A0A075B767 164 aa10.91□□□□□ -0.66
USE1-207ENST00000596136 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.91□□□□□ -0.66
USE1-207ENST00000596136 A0A0U1RQV5 110 aa10.91□□□□□ -0.66
USE1-207ENST00000596136 SLC22A31A6NKX4 558 aa10.91□□□□□ -0.66
USE1-207ENST00000596136 ANKRD30BLA7E2S9 258 aa10.91□□□□□ -0.66
USE1-207ENST00000596136 PRR32B1ATL7 298 aa10.91□□□□□ -0.66
USE1-207ENST00000596136 H3BNX3 289 aa10.91□□□□□ -0.66
USE1-207ENST00000596136 TCF21O43680 179 aa10.91□□□□□ -0.66
USE1-207ENST00000596136 ZNF205O95201 554 aa10.91□□□□□ -0.66
USE1-207ENST00000596136 LHBP01229 141 aa10.91□□□□□ -0.66
USE1-207ENST00000596136 IRF2P14316 349 aa10.91□□□□□ -0.66
USE1-207ENST00000596136 POLR2IP36954 125 aaKnown RBP10.91□□□□□ -0.66
USE1-207ENST00000596136 PSMB10P40306 273 aa10.91□□□□□ -0.66
USE1-207ENST00000596136 TUSC1Q2TAM9 212 aa10.91□□□□□ -0.66
USE1-207ENST00000596136 ESCO2Q56NI9 601 aa10.91□□□□□ -0.66
USE1-207ENST00000596136 ZNF841Q6ZN19 808 aa10.91□□□□□ -0.66
USE1-207ENST00000596136 DCDC5Q6ZRR9 648 aa10.91□□□□□ -0.66
USE1-207ENST00000596136 ZNF771Q7L3S4 317 aaPredicted RBP10.91□□□□□ -0.66
USE1-207ENST00000596136 BCDIN3DQ7Z5W3 292 aaKnown RBP10.91□□□□□ -0.66
USE1-207ENST00000596136 KRT77Q7Z794 578 aa10.91□□□□□ -0.66
USE1-207ENST00000596136 C11orf53Q8IXP5 236 aa10.91□□□□□ -0.66
USE1-207ENST00000596136 ZNF679Q8IYX0 411 aa10.91□□□□□ -0.66
USE1-207ENST00000596136 ASB17Q8WXJ9 295 aa10.91□□□□□ -0.66
USE1-207ENST00000596136 DVL3Q92997 716 aaPredicted RBP10.91□□□□□ -0.66
USE1-207ENST00000596136 LYZL4Q96KX0 146 aa10.91□□□□□ -0.66
USE1-207ENST00000596136 MNTQ99583 582 aa10.91□□□□□ -0.66
USE1-207ENST00000596136 C7orf69Q9H7B7 122 aa10.91□□□□□ -0.66
USE1-207ENST00000596136 BRD7Q9NPI1 651 aa10.91□□□□□ -0.66
USE1-207ENST00000596136 COPS3Q9UNS2 423 aa10.91□□□□□ -0.66
USE1-207ENST00000596136 INSIG2Q9Y5U4 225 aa10.91□□□□□ -0.66
USE1-207ENST00000596136 E9PQ18 207 aa10.9□□□□□ -0.66
USE1-207ENST00000596136 M0R129 80 aa10.9□□□□□ -0.66
USE1-207ENST00000596136 LGALS8O00214 317 aa10.9□□□□□ -0.66
USE1-207ENST00000596136 CST4P01036 141 aa10.9□□□□□ -0.66
USE1-207ENST00000596136 IGLV3-1P01715 115 aa10.9□□□□□ -0.66
USE1-207ENST00000596136 ACKR3P25106 362 aa10.9□□□□□ -0.66
USE1-207ENST00000596136 CFHR2P36980 270 aa10.9□□□□□ -0.66
USE1-207ENST00000596136 PAX8Q06710 450 aa10.9□□□□□ -0.66
USE1-207ENST00000596136 ZNF154Q13106 437 aa10.9□□□□□ -0.66
USE1-207ENST00000596136 FAM76BQ5HYJ3 339 aa10.9□□□□□ -0.66
USE1-207ENST00000596136 LIPNQ5VXI9 398 aa10.9□□□□□ -0.66
USE1-207ENST00000596136 ZFP1Q6P2D0 407 aa10.9□□□□□ -0.66
USE1-207ENST00000596136 USP43Q70EL4 1123 aa10.9□□□□□ -0.66
USE1-207ENST00000596136 WDR86Q86TI4 376 aa10.9□□□□□ -0.66
USE1-207ENST00000596136 GID4Q8IVV7 300 aa10.9□□□□□ -0.66
USE1-207ENST00000596136 GALNT4Q8N4A0 578 aa10.9□□□□□ -0.66
USE1-207ENST00000596136 OR8B12Q8NGG6 310 aa10.9□□□□□ -0.66
USE1-207ENST00000596136 NANPQ8TBE9 248 aa10.9□□□□□ -0.66
USE1-207ENST00000596136 PYDC1Q8WXC3 89 aa10.9□□□□□ -0.66
USE1-207ENST00000596136 ITPKCQ96DU7 683 aa10.9□□□□□ -0.66
USE1-207ENST00000596136 NEIL1Q96FI4 390 aaPredicted RBP10.9□□□□□ -0.66
USE1-207ENST00000596136 OR8B4Q96RC9 309 aa10.9□□□□□ -0.66
USE1-207ENST00000596136 CNN2Q99439 309 aaKnown RBP10.9□□□□□ -0.66
USE1-207ENST00000596136 RBM4BQ9BQ04 359 aaKnown RBP10.9□□□□□ -0.66
USE1-207ENST00000596136 SSBP3Q9BWW4 388 aaPredicted RBP10.9□□□□□ -0.66
USE1-207ENST00000596136 MROQ9BYG7 248 aa10.9□□□□□ -0.66
USE1-207ENST00000596136 TLNRD1Q9H1K6 362 aa10.9□□□□□ -0.66
USE1-207ENST00000596136 RNPEPL1Q9HAU8 725 aa10.9□□□□□ -0.66
USE1-207ENST00000596136 ADGRL4Q9HBW9 690 aa10.9□□□□□ -0.66
USE1-207ENST00000596136 ABCB9Q9NP78 766 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms