RNA–Protein interactions for RNA: ENST00000594862.1

SHKBP1-204, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 623 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-204ENST00000594862 ZNF254O75437 659 aa14.88□□□□□ -0.03
SHKBP1-204ENST00000594862 ALOX5APP20292 161 aa14.88□□□□□ -0.03
SHKBP1-204ENST00000594862 DCTDP32321 178 aa14.88□□□□□ -0.03
SHKBP1-204ENST00000594862 FAM3AP98173 230 aa14.88□□□□□ -0.03
SHKBP1-204ENST00000594862 NXNL2Q5VZ03 156 aa14.88□□□□□ -0.03
SHKBP1-204ENST00000594862 ASRGL1Q7L266 308 aa14.88□□□□□ -0.03
SHKBP1-204ENST00000594862 GID4Q8IVV7 300 aa14.88□□□□□ -0.03
SHKBP1-204ENST00000594862 BBS1Q8NFJ9 593 aa14.88□□□□□ -0.03
SHKBP1-204ENST00000594862 OR8B3Q8NGG8 313 aa14.88□□□□□ -0.03
SHKBP1-204ENST00000594862 ZNF418Q8TF45 676 aaPredicted RBP14.88□□□□□ -0.03
SHKBP1-204ENST00000594862 SGK3Q96BR1 496 aa14.88□□□□□ -0.03
SHKBP1-204ENST00000594862 OR8B2Q96RD0 313 aa14.88□□□□□ -0.03
SHKBP1-204ENST00000594862 CNN2Q99439 309 aaKnown RBP14.88□□□□□ -0.03
SHKBP1-204ENST00000594862 TEAD3Q99594 435 aa14.88□□□□□ -0.03
SHKBP1-204ENST00000594862 MRI1Q9BV20 369 aa14.88□□□□□ -0.03
SHKBP1-204ENST00000594862 SSBP3Q9BWW4 388 aaPredicted RBP14.88□□□□□ -0.03
SHKBP1-204ENST00000594862 MROQ9BYG7 248 aa14.88□□□□□ -0.03
SHKBP1-204ENST00000594862 TMEM165Q9HC07 324 aa14.88□□□□□ -0.03
SHKBP1-204ENST00000594862 ANXA2P2A6NMY6 339 aa14.87□□□□□ -0.03
SHKBP1-204ENST00000594862 ZAR1LA6NP61 321 aa14.87□□□□□ -0.03
SHKBP1-204ENST00000594862 WNT2P09544 360 aa14.87□□□□□ -0.03
SHKBP1-204ENST00000594862 EPHA1P21709 976 aa14.87□□□□□ -0.03
SHKBP1-204ENST00000594862 GNB2P62879 340 aa14.87□□□□□ -0.03
SHKBP1-204ENST00000594862 IL5RAQ01344 420 aa14.87□□□□□ -0.03
SHKBP1-204ENST00000594862 OR8B8Q15620 311 aa14.87□□□□□ -0.03
SHKBP1-204ENST00000594862 PRAMEF6Q5VXH4 476 aa14.87□□□□□ -0.03
SHKBP1-204ENST00000594862 ZFP1Q6P2D0 407 aa14.87□□□□□ -0.03
SHKBP1-204ENST00000594862 TMEM163Q8TC26 289 aa14.87□□□□□ -0.03
SHKBP1-204ENST00000594862 JMJD8Q96S16 334 aa14.87□□□□□ -0.03
SHKBP1-204ENST00000594862 TMEM246Q9BRR3 403 aa14.87□□□□□ -0.03
SHKBP1-204ENST00000594862 OCEL1Q9H607 264 aa14.87□□□□□ -0.03
SHKBP1-204ENST00000594862 UFSP2Q9NUQ7 469 aa14.87□□□□□ -0.03
SHKBP1-204ENST00000594862 LRP12Q9Y561 859 aa14.87□□□□□ -0.03
SHKBP1-204ENST00000594862 MPC1Q9Y5U8 109 aa14.87□□□□□ -0.03
SHKBP1-204ENST00000594862 NBEAL1Q6ZS30 2694 aa14.87□□□□□ -0.03
SHKBP1-204ENST00000594862 LOC105371242A0A075B767 164 aa14.86□□□□□ -0.03
SHKBP1-204ENST00000594862 IGHV3-64DA0A0J9YX35 117 aa14.86□□□□□ -0.03
SHKBP1-204ENST00000594862 C5orf63A6NC05 138 aa14.86□□□□□ -0.03
SHKBP1-204ENST00000594862 A6NLC8 198 aa14.86□□□□□ -0.03
SHKBP1-204ENST00000594862 NDUFA2O43678 99 aa14.86□□□□□ -0.03
SHKBP1-204ENST00000594862 PRKYO43930 277 aa14.86□□□□□ -0.03
SHKBP1-204ENST00000594862 ZNF12P17014 697 aa14.86□□□□□ -0.03
SHKBP1-204ENST00000594862 ZFP36P26651 326 aaKnown RBP14.86□□□□□ -0.03
SHKBP1-204ENST00000594862 PMELP40967 661 aa14.86□□□□□ -0.03
SHKBP1-204ENST00000594862 GSK3AP49840 483 aa14.86□□□□□ -0.03
SHKBP1-204ENST00000594862 NPY4RP50391 375 aa14.86□□□□□ -0.03
SHKBP1-204ENST00000594862 ACTR3P61158 418 aa14.86□□□□□ -0.03
SHKBP1-204ENST00000594862 ROM1Q03395 351 aa14.86□□□□□ -0.03
SHKBP1-204ENST00000594862 GFOD2Q3B7J2 385 aa14.86□□□□□ -0.03
SHKBP1-204ENST00000594862 ZNF829Q3KNS6 432 aaPredicted RBP14.86□□□□□ -0.03
SHKBP1-204ENST00000594862 C12orf73Q69YU5 71 aa14.86□□□□□ -0.03
SHKBP1-204ENST00000594862 BTNL3Q6UXE8 466 aa14.86□□□□□ -0.03
SHKBP1-204ENST00000594862 LRRN1Q6UXK5 716 aa14.86□□□□□ -0.03
SHKBP1-204ENST00000594862 ZFAND2BQ8WV99 257 aa14.86□□□□□ -0.03
SHKBP1-204ENST00000594862 LRTOMTQ8WZ04 291 aa14.86□□□□□ -0.03
SHKBP1-204ENST00000594862 RBM4BQ9BQ04 359 aaKnown RBP14.86□□□□□ -0.03
SHKBP1-204ENST00000594862 BRD7Q9NPI1 651 aa14.86□□□□□ -0.03
SHKBP1-204ENST00000594862 INSIG2Q9Y5U4 225 aa14.86□□□□□ -0.03
SHKBP1-204ENST00000594862 TRAV38-1A0A0B4J264 116 aa14.85□□□□□ -0.03
SHKBP1-204ENST00000594862 CCDC182A6NF36 153 aa14.85□□□□□ -0.03
SHKBP1-204ENST00000594862 LGALS8O00214 317 aa14.85□□□□□ -0.03
SHKBP1-204ENST00000594862 PPIAL4GP0DN37 164 aa14.85□□□□□ -0.03
SHKBP1-204ENST00000594862 ATP6V1B1P15313 513 aa14.85□□□□□ -0.03
SHKBP1-204ENST00000594862 ANOS1P23352 680 aa14.85□□□□□ -0.03
SHKBP1-204ENST00000594862 PITPNBP48739 271 aa14.85□□□□□ -0.03
SHKBP1-204ENST00000594862 ZNF154Q13106 437 aa14.85□□□□□ -0.03
SHKBP1-204ENST00000594862 MPPED2Q15777 294 aa14.85□□□□□ -0.03
SHKBP1-204ENST00000594862 USP43Q70EL4 1123 aa14.85□□□□□ -0.03
SHKBP1-204ENST00000594862 MEPCEQ7L2J0 689 aaKnown RBP14.85□□□□□ -0.03
SHKBP1-204ENST00000594862 AMIGO2Q86SJ2 522 aa14.85□□□□□ -0.03
SHKBP1-204ENST00000594862 PHC2Q8IXK0 858 aa14.85□□□□□ -0.03
SHKBP1-204ENST00000594862 ZNF679Q8IYX0 411 aa14.85□□□□□ -0.03
SHKBP1-204ENST00000594862 TCEANCQ8N8B7 351 aa14.85□□□□□ -0.03
SHKBP1-204ENST00000594862 CIB1Q99828 191 aa14.85□□□□□ -0.03
SHKBP1-204ENST00000594862 MICU1Q9BPX6 476 aa14.85□□□□□ -0.03
SHKBP1-204ENST00000594862 RTL8AQ9BWD3 113 aa14.85□□□□□ -0.03
SHKBP1-204ENST00000594862 PAPOLGQ9BWT3 736 aaKnown RBP14.85□□□□□ -0.03
SHKBP1-204ENST00000594862 SUCNR1Q9BXA5 334 aa14.85□□□□□ -0.03
SHKBP1-204ENST00000594862 GABARAPL3Q9BY60 117 aa14.85□□□□□ -0.03
SHKBP1-204ENST00000594862 MOB1AQ9H8S9 216 aa14.85□□□□□ -0.03
SHKBP1-204ENST00000594862 RNPEPL1Q9HAU8 725 aa14.85□□□□□ -0.03
SHKBP1-204ENST00000594862 C1orf123Q9NWV4 160 aa14.85□□□□□ -0.03
SHKBP1-204ENST00000594862 HAO2Q9NYQ3 351 aa14.85□□□□□ -0.03
SHKBP1-204ENST00000594862 CLN8Q9UBY8 286 aa14.85□□□□□ -0.03
SHKBP1-204ENST00000594862 OAZ3Q9UMX2 235 aa14.85□□□□□ -0.03
SHKBP1-204ENST00000594862 KLHDC2Q9Y2U9 406 aa14.85□□□□□ -0.03
SHKBP1-204ENST00000594862 ORC6Q9Y5N6 252 aa14.85□□□□□ -0.03
SHKBP1-204ENST00000594862 AUP1Q9Y679 476 aa14.85□□□□□ -0.03
SHKBP1-204ENST00000594862 SVEP1Q4LDE5 3571 aa14.84□□□□□ -0.03
SHKBP1-204ENST00000594862 A0A0U1RQV5 110 aa14.84□□□□□ -0.03
SHKBP1-204ENST00000594862 hCG_1807616A0A1W2PRN6 198 aa14.84□□□□□ -0.03
SHKBP1-204ENST00000594862 MITFO75030 526 aaPredicted RBP14.84□□□□□ -0.03
SHKBP1-204ENST00000594862 CST4P01036 141 aa14.84□□□□□ -0.03
SHKBP1-204ENST00000594862 MRPL3P09001 348 aaKnown RBP14.84□□□□□ -0.03
SHKBP1-204ENST00000594862 FPR2P25090 351 aa14.84□□□□□ -0.03
SHKBP1-204ENST00000594862 RIDAP52758 137 aaKnown RBP14.84□□□□□ -0.03
SHKBP1-204ENST00000594862 SEC61A1P61619 476 aaKnown RBP14.84□□□□□ -0.03
SHKBP1-204ENST00000594862 POU4F2Q12837 409 aa14.84□□□□□ -0.03
SHKBP1-204ENST00000594862 KRTAP24-1Q3LI83 254 aa14.84□□□□□ -0.03
SHKBP1-204ENST00000594862 ARMCX4Q5H9R4 360 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms