RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 OR4K15Q8NH41 348 aa14.61□□□□□ -0.07
LIG1-206ENST00000594067 LILRB1Q8NHL6 650 aaPredicted RBP14.61□□□□□ -0.07
LIG1-206ENST00000594067 RNF141Q8WVD5 230 aa14.61□□□□□ -0.07
LIG1-206ENST00000594067 LHFPL6Q9Y693 200 aa14.61□□□□□ -0.07
LIG1-206ENST00000594067 MPIG6BO95866 241 aa14.6□□□□□ -0.07
LIG1-206ENST00000594067 HEXBP07686 556 aa14.6□□□□□ -0.07
LIG1-206ENST00000594067 GIMD1P0DJR0 217 aa14.6□□□□□ -0.07
LIG1-206ENST00000594067 SERPINF1P36955 418 aa14.6□□□□□ -0.07
LIG1-206ENST00000594067 NPBWR1P48145 328 aa14.6□□□□□ -0.07
LIG1-206ENST00000594067 CLRN1P58418 232 aa14.6□□□□□ -0.07
LIG1-206ENST00000594067 FOXK1P85037 733 aa14.6□□□□□ -0.07
LIG1-206ENST00000594067 DMRTC1Q5HYR2 192 aa14.6□□□□□ -0.07
LIG1-206ENST00000594067 NKAPLQ5M9Q1 402 aa14.6□□□□□ -0.07
LIG1-206ENST00000594067 DTWD2Q8NBA8 298 aa14.6□□□□□ -0.07
LIG1-206ENST00000594067 NFAM1Q8NET5 270 aaPredicted RBP14.6□□□□□ -0.07
LIG1-206ENST00000594067 TMED6Q8WW62 240 aa14.6□□□□□ -0.07
LIG1-206ENST00000594067 CNTNAP3BQ96NU0 1288 aa14.6□□□□□ -0.07
LIG1-206ENST00000594067 LPAR5Q9H1C0 372 aa14.6□□□□□ -0.07
LIG1-206ENST00000594067 BANF2Q9H503 90 aa14.6□□□□□ -0.07
LIG1-206ENST00000594067 BIN3Q9NQY0 253 aa14.6□□□□□ -0.07
LIG1-206ENST00000594067 B3GALT5Q9Y2C3 310 aa14.6□□□□□ -0.07
LIG1-206ENST00000594067 RPH3AQ9Y2J0 694 aaPredicted RBP14.6□□□□□ -0.07
LIG1-206ENST00000594067 TRBV11-1A0A0K0K1C0 115 aa14.6□□□□□ -0.07
LIG1-206ENST00000594067 SOCS1O15524 211 aa14.6□□□□□ -0.07
LIG1-206ENST00000594067 GPR85P60893 370 aa14.6□□□□□ -0.07
LIG1-206ENST00000594067 TMPPEQ6ZT21 453 aa14.6□□□□□ -0.07
LIG1-206ENST00000594067 ABHD12BQ7Z5M8 362 aaPredicted RBP14.6□□□□□ -0.07
LIG1-206ENST00000594067 SLC38A9Q8NBW4 561 aa14.6□□□□□ -0.07
LIG1-206ENST00000594067 DCUN1D4Q92564 292 aa14.6□□□□□ -0.07
LIG1-206ENST00000594067 TMEM41AQ96HV5 264 aa14.6□□□□□ -0.07
LIG1-206ENST00000594067 MRPL13Q9BYD1 178 aaKnown RBP14.6□□□□□ -0.07
LIG1-206ENST00000594067 TMEM231Q9H6L2 316 aa14.6□□□□□ -0.07
LIG1-206ENST00000594067 PPP4R1LQ9P1A2 415 aa14.6□□□□□ -0.07
LIG1-206ENST00000594067 KLHL13Q9P2N7 655 aa14.6□□□□□ -0.07
LIG1-206ENST00000594067 MRPS28Q9Y2Q9 187 aaKnown RBP14.6□□□□□ -0.07
LIG1-206ENST00000594067 A0A0B4J2A0 478 aa14.59□□□□□ -0.07
LIG1-206ENST00000594067 A0A1W2PNR3 127 aa14.59□□□□□ -0.07
LIG1-206ENST00000594067 A0A1W2PP11 408 aa14.59□□□□□ -0.07
LIG1-206ENST00000594067 PQLC2LA1A4F0 135 aa14.59□□□□□ -0.07
LIG1-206ENST00000594067 H0YIZ8 118 aa14.59□□□□□ -0.07
LIG1-206ENST00000594067 OR3A4PP47883 348 aa14.59□□□□□ -0.07
LIG1-206ENST00000594067 AIMP2Q13155 320 aaKnown RBP14.59□□□□□ -0.07
LIG1-206ENST00000594067 MST1LQ2TV78 715 aa14.59□□□□□ -0.07
LIG1-206ENST00000594067 GFOD2Q3B7J2 385 aa14.59□□□□□ -0.07
LIG1-206ENST00000594067 ZNF529Q6P280 563 aa14.59□□□□□ -0.07
LIG1-206ENST00000594067 ZSCAN4Q8NAM6 433 aaPredicted RBP14.59□□□□□ -0.07
LIG1-206ENST00000594067 ELP5Q8TE02 316 aa14.59□□□□□ -0.07
LIG1-206ENST00000594067 FAM71F1Q96KD3 344 aaPredicted RBP14.59□□□□□ -0.07
LIG1-206ENST00000594067 SHPKQ9UHJ6 478 aa14.59□□□□□ -0.07
LIG1-206ENST00000594067 SNAPINO95295 136 aa14.59□□□□□ -0.07
LIG1-206ENST00000594067 SUMO3P55854 103 aaPredicted RBP14.59□□□□□ -0.07
LIG1-206ENST00000594067 PNLIPRP3Q17RR3 467 aa14.59□□□□□ -0.07
LIG1-206ENST00000594067 PLAC9Q5JTB6 97 aa14.59□□□□□ -0.07
LIG1-206ENST00000594067 UEVLDQ8IX04 471 aa14.59□□□□□ -0.07
LIG1-206ENST00000594067 OR5AS1Q8N127 324 aa14.59□□□□□ -0.07
LIG1-206ENST00000594067 CARFQ8N187 725 aa14.59□□□□□ -0.07
LIG1-206ENST00000594067 OR8B12Q8NGG6 310 aa14.59□□□□□ -0.07
LIG1-206ENST00000594067 OR2AJ1Q8NGZ0 328 aa14.59□□□□□ -0.07
LIG1-206ENST00000594067 POC1BQ8TC44 478 aa14.59□□□□□ -0.07
LIG1-206ENST00000594067 GLYATL2Q8WU03 294 aa14.59□□□□□ -0.07
LIG1-206ENST00000594067 SEC11CQ9BY50 192 aa14.59□□□□□ -0.07
LIG1-206ENST00000594067 ACKR4Q9NPB9 350 aa14.59□□□□□ -0.07
LIG1-206ENST00000594067 UQCC1Q9NVA1 299 aa14.59□□□□□ -0.07
LIG1-206ENST00000594067 ZNF319Q9P2F9 582 aa14.59□□□□□ -0.07
LIG1-206ENST00000594067 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.59□□□□□ -0.07
LIG1-206ENST00000594067 NUDT19A8MXV4 375 aa14.59□□□□□ -0.07
LIG1-206ENST00000594067 CRYBA1P05813 215 aa14.59□□□□□ -0.07
LIG1-206ENST00000594067 SPP1P10451 314 aa14.59□□□□□ -0.07
LIG1-206ENST00000594067 HOXB1P14653 301 aaPredicted RBP14.59□□□□□ -0.07
LIG1-206ENST00000594067 ZNF41P51814 821 aaPredicted RBP14.59□□□□□ -0.07
LIG1-206ENST00000594067 THEM4Q5T1C6 240 aa14.59□□□□□ -0.07
LIG1-206ENST00000594067 HOGA1Q86XE5 327 aa14.59□□□□□ -0.07
LIG1-206ENST00000594067 SLC25A45Q8N413 288 aa14.59□□□□□ -0.07
LIG1-206ENST00000594067 CMSS1Q9BQ75 279 aaKnown RBP14.59□□□□□ -0.07
LIG1-206ENST00000594067 NMES1Q9C002 83 aa14.59□□□□□ -0.07
LIG1-206ENST00000594067 TREM1Q9NP99 234 aa14.59□□□□□ -0.07
LIG1-206ENST00000594067 GPR84Q9NQS5 396 aa14.59□□□□□ -0.07
LIG1-206ENST00000594067 MMP26Q9NRE1 261 aa14.59□□□□□ -0.07
LIG1-206ENST00000594067 PRR13Q9NZ81 148 aa14.59□□□□□ -0.07
LIG1-206ENST00000594067 MEX3AA1L020 520 aaKnown RBP14.58□□□□□ -0.08
LIG1-206ENST00000594067 ZNF878C9JN71 531 aa14.58□□□□□ -0.08
LIG1-206ENST00000594067 SCGNO76038 276 aa14.58□□□□□ -0.08
LIG1-206ENST00000594067 GLB1P16278 677 aa14.58□□□□□ -0.08
LIG1-206ENST00000594067 ZNF121P58317 390 aaPredicted RBP14.58□□□□□ -0.08
LIG1-206ENST00000594067 FAM69BQ5VUD6 431 aa14.58□□□□□ -0.08
LIG1-206ENST00000594067 PGAP1Q75T13 922 aa14.58□□□□□ -0.08
LIG1-206ENST00000594067 ROBO4Q8WZ75 1007 aa14.58□□□□□ -0.08
LIG1-206ENST00000594067 ZFP57Q9NU63 452 aa14.58□□□□□ -0.08
LIG1-206ENST00000594067 ASH2LQ9UBL3 628 aa14.58□□□□□ -0.08
LIG1-206ENST00000594067 PHF3Q92576 2039 aaKnown RBP14.58□□□□□ -0.08
LIG1-206ENST00000594067 A0A1W2PNV4 684 aa14.58□□□□□ -0.08
LIG1-206ENST00000594067 ZNF814B7Z6K7 855 aa14.58□□□□□ -0.08
LIG1-206ENST00000594067 RER1O15258 196 aa14.58□□□□□ -0.08
LIG1-206ENST00000594067 NPY4RP50391 375 aa14.58□□□□□ -0.08
LIG1-206ENST00000594067 NOXO1Q8NFA2 376 aa14.58□□□□□ -0.08
LIG1-206ENST00000594067 DMBX1Q8NFW5 382 aa14.58□□□□□ -0.08
LIG1-206ENST00000594067 RAB3CQ96E17 227 aa14.58□□□□□ -0.08
LIG1-206ENST00000594067 SDHAF3Q9NRP4 125 aa14.58□□□□□ -0.08
LIG1-206ENST00000594067 SEMA5BQ9P283 1151 aa14.58□□□□□ -0.08
LIG1-206ENST00000594067 RAD51DO75771 328 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms