RNA–Protein interactions for RNA: ENST00000593919.5

VRK3-205, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best) BASIC

Gene VRK3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-205ENST00000593919 CMTM3Q96MX0 182 aa11.53□□□□□ -0.56
VRK3-205ENST00000593919 OR2H1Q9GZK4 316 aa11.53□□□□□ -0.56
VRK3-205ENST00000593919 PBOV1Q9GZY1 135 aa11.53□□□□□ -0.56
VRK3-205ENST00000593919 WNT5BQ9H1J7 359 aa11.53□□□□□ -0.56
VRK3-205ENST00000593919 TP63Q9H3D4 680 aaPredicted RBP11.53□□□□□ -0.56
VRK3-205ENST00000593919 TRAV6A0A075B6T7 132 aa11.52□□□□□ -0.56
VRK3-205ENST00000593919 LOC107986453A0A1B0GWG9 222 aa11.52□□□□□ -0.56
VRK3-205ENST00000593919 ZNF503-AS2A6NEH8 195 aa11.52□□□□□ -0.56
VRK3-205ENST00000593919 GSTZ1O43708 216 aaPredicted RBP11.52□□□□□ -0.56
VRK3-205ENST00000593919 IL2RAP01589 272 aa11.52□□□□□ -0.56
VRK3-205ENST00000593919 HLA-HP01893 362 aa11.52□□□□□ -0.56
VRK3-205ENST00000593919 TTRP02766 147 aa11.52□□□□□ -0.56
VRK3-205ENST00000593919 MT-ND4P03905 459 aa11.52□□□□□ -0.56
VRK3-205ENST00000593919 HOXD4P09016 255 aaPredicted RBP11.52□□□□□ -0.56
VRK3-205ENST00000593919 TMIGD3P0DMS9 266 aaPredicted RBP11.52□□□□□ -0.56
VRK3-205ENST00000593919 CALCBP10092 127 aa11.52□□□□□ -0.56
VRK3-205ENST00000593919 IGHV1-2P23083 117 aa11.52□□□□□ -0.56
VRK3-205ENST00000593919 CTSSP25774 331 aa11.52□□□□□ -0.56
VRK3-205ENST00000593919 SLC6A9P48067 706 aa11.52□□□□□ -0.56
VRK3-205ENST00000593919 LY6DQ14210 128 aa11.52□□□□□ -0.56
VRK3-205ENST00000593919 SFRP5Q5T4F7 317 aa11.52□□□□□ -0.56
VRK3-205ENST00000593919 DOLPP1Q86YN1 238 aa11.52□□□□□ -0.56
VRK3-205ENST00000593919 OR1K1Q8NGR3 316 aa11.52□□□□□ -0.56
VRK3-205ENST00000593919 SMIM4Q8WVI0 70 aa11.52□□□□□ -0.56
VRK3-205ENST00000593919 STARD4Q96DR4 205 aa11.52□□□□□ -0.56
VRK3-205ENST00000593919 DPAGT1Q9H3H5 408 aa11.52□□□□□ -0.56
VRK3-205ENST00000593919 MOB1AQ9H8S9 216 aa11.52□□□□□ -0.56
VRK3-205ENST00000593919 PLSCR4Q9NRQ2 329 aa11.52□□□□□ -0.56
VRK3-205ENST00000593919 MRPL15Q9P015 296 aaKnown RBP11.52□□□□□ -0.56
VRK3-205ENST00000593919 TINAGQ9UJW2 476 aa11.52□□□□□ -0.56
VRK3-205ENST00000593919 OR6C6A6NF89 314 aa11.52□□□□□ -0.57
VRK3-205ENST00000593919 TTLL8A6PVC2 850 aa11.52□□□□□ -0.57
VRK3-205ENST00000593919 M0R135 149 aa11.52□□□□□ -0.57
VRK3-205ENST00000593919 CTDSPLO15194 276 aa11.52□□□□□ -0.57
VRK3-205ENST00000593919 CNOT4O95628 575 aaKnown RBP11.52□□□□□ -0.57
VRK3-205ENST00000593919 RAF1P04049 648 aa11.52□□□□□ -0.57
VRK3-205ENST00000593919 ISG15P05161 165 aa11.52□□□□□ -0.57
VRK3-205ENST00000593919 UBCP0CG48 685 aaKnown RBP11.52□□□□□ -0.57
VRK3-205ENST00000593919 CRYGSP22914 178 aa11.52□□□□□ -0.57
VRK3-205ENST00000593919 GDNFP39905 211 aa11.52□□□□□ -0.57
VRK3-205ENST00000593919 HTR5AP47898 357 aa11.52□□□□□ -0.57
VRK3-205ENST00000593919 IFITM2Q01629 132 aa11.52□□□□□ -0.57
VRK3-205ENST00000593919 HIKESHIQ53FT3 197 aa11.52□□□□□ -0.57
VRK3-205ENST00000593919 PABPC1L2AQ5JQF8 200 aa11.52□□□□□ -0.57
VRK3-205ENST00000593919 ANKRD16Q6P6B7 361 aa11.52□□□□□ -0.57
VRK3-205ENST00000593919 NAA40Q86UY6 237 aa11.52□□□□□ -0.57
VRK3-205ENST00000593919 ELMOD2Q8IZ81 293 aa11.52□□□□□ -0.57
VRK3-205ENST00000593919 OR8B12Q8NGG6 310 aa11.52□□□□□ -0.57
VRK3-205ENST00000593919 OR1F12Q8NHA8 337 aa11.52□□□□□ -0.57
VRK3-205ENST00000593919 ZNF799Q96GE5 643 aa11.52□□□□□ -0.57
VRK3-205ENST00000593919 NUDT15Q9NV35 164 aa11.52□□□□□ -0.57
VRK3-205ENST00000593919 ZNF835Q9Y2P0 537 aa11.52□□□□□ -0.57
VRK3-205ENST00000593919 P2RY10O00398 339 aa11.51□□□□□ -0.57
VRK3-205ENST00000593919 LYZL6O75951 148 aa11.51□□□□□ -0.57
VRK3-205ENST00000593919 CGAP01215 116 aa11.51□□□□□ -0.57
VRK3-205ENST00000593919 CRHP06850 196 aa11.51□□□□□ -0.57
VRK3-205ENST00000593919 ACSM4P0C7M7 580 aa11.51□□□□□ -0.57
VRK3-205ENST00000593919 GIFP27352 417 aa11.51□□□□□ -0.57
VRK3-205ENST00000593919 RCVRNP35243 200 aa11.51□□□□□ -0.57
VRK3-205ENST00000593919 CCR6P51684 374 aa11.51□□□□□ -0.57
VRK3-205ENST00000593919 RRAS2P62070 204 aaPredicted RBP11.51□□□□□ -0.57
VRK3-205ENST00000593919 ECH1Q13011 328 aa11.51□□□□□ -0.57
VRK3-205ENST00000593919 EIF2S3LQ2VIR3 472 aaKnown RBP11.51□□□□□ -0.57
VRK3-205ENST00000593919 TMEM69Q5SWH9 247 aa11.51□□□□□ -0.57
VRK3-205ENST00000593919 ZNF704Q6ZNC4 412 aaPredicted RBP11.51□□□□□ -0.57
VRK3-205ENST00000593919 FAM57BQ71RH2 274 aa11.51□□□□□ -0.57
VRK3-205ENST00000593919 BCL2L2Q92843 193 aaPredicted RBP11.51□□□□□ -0.57
VRK3-205ENST00000593919 SPTSSAQ969W0 71 aa11.51□□□□□ -0.57
VRK3-205ENST00000593919 S100A16Q96FQ6 103 aaKnown RBP11.51□□□□□ -0.57
VRK3-205ENST00000593919 MRI1Q9BV20 369 aa11.51□□□□□ -0.57
VRK3-205ENST00000593919 NOX3Q9HBY0 568 aa11.51□□□□□ -0.57
VRK3-205ENST00000593919 MCUBQ9NWR8 336 aa11.51□□□□□ -0.57
VRK3-205ENST00000593919 ZNF319Q9P2F9 582 aa11.51□□□□□ -0.57
VRK3-205ENST00000593919 HHLA2Q9UM44 414 aa11.51□□□□□ -0.57
VRK3-205ENST00000593919 PROCRQ9UNN8 238 aa11.51□□□□□ -0.57
VRK3-205ENST00000593919 FOXJ3Q9UPW0 622 aa11.51□□□□□ -0.57
VRK3-205ENST00000593919 TMEM127O75204 238 aa11.5□□□□□ -0.57
VRK3-205ENST00000593919 RAD51DO75771 328 aa11.5□□□□□ -0.57
VRK3-205ENST00000593919 TCRBP04435 133 aa11.5□□□□□ -0.57
VRK3-205ENST00000593919 GLI4P10075 376 aa11.5□□□□□ -0.57
VRK3-205ENST00000593919 CD79AP11912 226 aa11.5□□□□□ -0.57
VRK3-205ENST00000593919 PTHLHP12272 177 aa11.5□□□□□ -0.57
VRK3-205ENST00000593919 EDN3P14138 238 aa11.5□□□□□ -0.57
VRK3-205ENST00000593919 COX5AP20674 150 aa11.5□□□□□ -0.57
VRK3-205ENST00000593919 ACHEP22303 614 aa11.5□□□□□ -0.57
VRK3-205ENST00000593919 CDK2P24941 298 aa11.5□□□□□ -0.57
VRK3-205ENST00000593919 ART1P52961 327 aa11.5□□□□□ -0.57
VRK3-205ENST00000593919 BTG1P62324 171 aa11.5□□□□□ -0.57
VRK3-205ENST00000593919 TGFBR3Q03167 851 aa11.5□□□□□ -0.57
VRK3-205ENST00000593919 HGFACQ04756 655 aa11.5□□□□□ -0.57
VRK3-205ENST00000593919 PLA2G7Q13093 441 aa11.5□□□□□ -0.57
VRK3-205ENST00000593919 KLF9Q13886 244 aaPredicted RBP11.5□□□□□ -0.57
VRK3-205ENST00000593919 TMEM244Q5VVB8 128 aa11.5□□□□□ -0.57
VRK3-205ENST00000593919 NOXA1Q86UR1 476 aa11.5□□□□□ -0.57
VRK3-205ENST00000593919 GABRG1Q8N1C3 465 aa11.5□□□□□ -0.57
VRK3-205ENST00000593919 CPEB3Q8NE35 698 aaKnown RBP11.5□□□□□ -0.57
VRK3-205ENST00000593919 OR52I2Q8NH67 350 aa11.5□□□□□ -0.57
VRK3-205ENST00000593919 ASB5Q8WWX0 329 aa11.5□□□□□ -0.57
VRK3-205ENST00000593919 RAB40AQ8WXH6 277 aa11.5□□□□□ -0.57
VRK3-205ENST00000593919 AKAP1Q92667 903 aaKnown RBP eCLIP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms