RNA–Protein interactions for RNA: ENST00000592790.1

VMP1-216, Transcript of vacuole membrane protein 1, humanhuman

Gene VMP1, Length 4,325 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-216ENST00000592790 MMP16P51512 607 aa3.17□□□□□ -1.9
VMP1-216ENST00000592790 RPS4XP62701 263 aaKnown RBP3.17□□□□□ -1.9
VMP1-216ENST00000592790 FAM3AP98173 230 aa3.17□□□□□ -1.9
VMP1-216ENST00000592790 ZP2Q05996 745 aa3.17□□□□□ -1.9
VMP1-216ENST00000592790 FUT7Q11130 342 aa3.17□□□□□ -1.9
VMP1-216ENST00000592790 CLINT1Q14677 625 aa3.17□□□□□ -1.9
VMP1-216ENST00000592790 RAB30Q15771 203 aa3.17□□□□□ -1.9
VMP1-216ENST00000592790 TAF9Q16594 264 aa3.17□□□□□ -1.9
VMP1-216ENST00000592790 TEX30Q5JUR7 227 aa3.17□□□□□ -1.9
VMP1-216ENST00000592790 FHL5Q5TD97 284 aa3.17□□□□□ -1.9
VMP1-216ENST00000592790 NPSR1Q6W5P4 371 aa3.17□□□□□ -1.9
VMP1-216ENST00000592790 SSX9Q7RTT3 188 aa3.17□□□□□ -1.9
VMP1-216ENST00000592790 OR5AP2Q8NGF4 316 aa3.17□□□□□ -1.9
VMP1-216ENST00000592790 IFI44Q8TCB0 444 aa3.17□□□□□ -1.9
VMP1-216ENST00000592790 MCHR2Q969V1 340 aa3.17□□□□□ -1.9
VMP1-216ENST00000592790 MRGPRX4Q96LA9 322 aa3.17□□□□□ -1.9
VMP1-216ENST00000592790 TSSK2Q96PF2 358 aa3.17□□□□□ -1.9
VMP1-216ENST00000592790 AQP10Q96PS8 301 aa3.17□□□□□ -1.9
VMP1-216ENST00000592790 PTDSS2Q9BVG9 487 aa3.17□□□□□ -1.9
VMP1-216ENST00000592790 DEFB126Q9BYW3 111 aa3.17□□□□□ -1.9
VMP1-216ENST00000592790 SPACA1Q9HBV2 294 aa3.17□□□□□ -1.9
VMP1-216ENST00000592790 ABI3Q9P2A4 366 aa3.17□□□□□ -1.9
VMP1-216ENST00000592790 RHBDD3Q9Y3P4 386 aa3.17□□□□□ -1.9
VMP1-216ENST00000592790 TMED3Q9Y3Q3 217 aa3.17□□□□□ -1.9
VMP1-216ENST00000592790 ZNF106Q9H2Y7 1883 aaKnown RBP3.17□□□□□ -1.9
VMP1-216ENST00000592790 IGKV1-8A0A0C4DH67 115 aa3.17□□□□□ -1.9
VMP1-216ENST00000592790 KIR2DS1A0A191URI9 304 aa3.17□□□□□ -1.9
VMP1-216ENST00000592790 TCRBV16S1A1N1A0A5B0 115 aa3.17□□□□□ -1.9
VMP1-216ENST00000592790 NPIPB13A6NJU9 1138 aa3.17□□□□□ -1.9
VMP1-216ENST00000592790 NPIPB4C9JG80 1138 aa3.17□□□□□ -1.9
VMP1-216ENST00000592790 FTCDNL1E5RQL4 147 aa3.17□□□□□ -1.9
VMP1-216ENST00000592790 UPK3AO75631 287 aa3.17□□□□□ -1.9
VMP1-216ENST00000592790 ZFAND5O76080 213 aa3.17□□□□□ -1.9
VMP1-216ENST00000592790 SLC34A2O95436 690 aa3.17□□□□□ -1.9
VMP1-216ENST00000592790 F12P00748 615 aaPredicted RBP3.17□□□□□ -1.9
VMP1-216ENST00000592790 IL2RAP01589 272 aa3.17□□□□□ -1.9
VMP1-216ENST00000592790 MBPP02686 304 aaPredicted RBP3.17□□□□□ -1.9
VMP1-216ENST00000592790 CTSDP07339 412 aaPredicted RBP3.17□□□□□ -1.9
VMP1-216ENST00000592790 H2AFB1P0C5Y9 115 aa3.17□□□□□ -1.9
VMP1-216ENST00000592790 ASAH2BP0C7U1 165 aa3.17□□□□□ -1.9
VMP1-216ENST00000592790 CFPP27918 469 aa3.17□□□□□ -1.9
VMP1-216ENST00000592790 ABCD3P28288 659 aa3.17□□□□□ -1.9
VMP1-216ENST00000592790 CD1CP29017 333 aa3.17□□□□□ -1.9
VMP1-216ENST00000592790 ALDH3B1P43353 468 aa3.17□□□□□ -1.9
VMP1-216ENST00000592790 KIR2DS4P43632 304 aa3.17□□□□□ -1.9
VMP1-216ENST00000592790 SULT1A2P50226 295 aa3.17□□□□□ -1.9
VMP1-216ENST00000592790 LSM11P83369 360 aaKnown RBP eCLIP3.17□□□□□ -1.91e-6■□□□□ 8.8
VMP1-216ENST00000592790 PSG6Q00889 435 aa3.17□□□□□ -1.9
VMP1-216ENST00000592790 PNRC1Q12796 327 aaPredicted RBP3.17□□□□□ -1.9
VMP1-216ENST00000592790 FZD2Q14332 565 aa3.17□□□□□ -1.9
VMP1-216ENST00000592790 KIR2DS1Q14954 304 aa3.17□□□□□ -1.9
VMP1-216ENST00000592790 SSX2Q16385 188 aa3.17□□□□□ -1.9
VMP1-216ENST00000592790 GUK1Q16774 197 aa3.17□□□□□ -1.9
VMP1-216ENST00000592790 DEFB110Q30KQ9 67 aa3.17□□□□□ -1.9
VMP1-216ENST00000592790 TMEM88Q6PEY1 159 aa3.17□□□□□ -1.9
VMP1-216ENST00000592790 DPPA3Q6W0C5 159 aa3.17□□□□□ -1.9
VMP1-216ENST00000592790 KMT5CQ86Y97 462 aa3.17□□□□□ -1.9
VMP1-216ENST00000592790 FAM213BQ8TBF2 198 aa3.17□□□□□ -1.9
VMP1-216ENST00000592790 ASB5Q8WWX0 329 aa3.17□□□□□ -1.9
VMP1-216ENST00000592790 TOMM40LQ969M1 308 aa3.17□□□□□ -1.9
VMP1-216ENST00000592790 SPSB1Q96BD6 273 aa3.17□□□□□ -1.9
VMP1-216ENST00000592790 RRNAD1Q96FB5 475 aaKnown RBP3.17□□□□□ -1.9
VMP1-216ENST00000592790 WFDC6Q9BQY6 131 aa3.17□□□□□ -1.9
VMP1-216ENST00000592790 ZNF649Q9BS31 505 aa3.17□□□□□ -1.9
VMP1-216ENST00000592790 ZPBPQ9BS86 351 aa3.17□□□□□ -1.9
VMP1-216ENST00000592790 WBP1LQ9NX94 342 aa3.17□□□□□ -1.9
VMP1-216ENST00000592790 CTSFQ9UBX1 484 aa3.17□□□□□ -1.9
VMP1-216ENST00000592790 VDAC3Q9Y277 283 aa3.17□□□□□ -1.9
VMP1-216ENST00000592790 TMEM184BQ9Y519 407 aaPredicted RBP3.17□□□□□ -1.9
VMP1-216ENST00000592790 MKI67P46013 3256 aaKnown RBP3.17□□□□□ -1.9
VMP1-216ENST00000592790 RP1L1Q8IWN7 2480 aaPredicted RBP3.17□□□□□ -1.9
VMP1-216ENST00000592790 PCM1Q15154 2024 aa3.17□□□□□ -1.9
VMP1-216ENST00000592790 A0A087WZY1 265 aa3.17□□□□□ -1.9
VMP1-216ENST00000592790 A0A1W2PPC1 479 aa3.17□□□□□ -1.9
VMP1-216ENST00000592790 SEC14L6B5MCN3 397 aa3.17□□□□□ -1.9
VMP1-216ENST00000592790 PTBP3O95758 552 aaKnown RBP3.17□□□□□ -1.9
VMP1-216ENST00000592790 FCGR2AP12318 317 aa3.17□□□□□ -1.9
VMP1-216ENST00000592790 SERPINA2P20848 420 aa3.17□□□□□ -1.9
VMP1-216ENST00000592790 DRD3P35462 400 aa3.17□□□□□ -1.9
VMP1-216ENST00000592790 P2RY1P47900 373 aa3.17□□□□□ -1.9
VMP1-216ENST00000592790 BIDP55957 195 aa3.17□□□□□ -1.9
VMP1-216ENST00000592790 H2BFSP57053 126 aa3.17□□□□□ -1.9
VMP1-216ENST00000592790 NANOS3P60323 173 aaKnown RBP3.17□□□□□ -1.9
VMP1-216ENST00000592790 RPP30P78346 268 aaKnown RBP3.17□□□□□ -1.9
VMP1-216ENST00000592790 SRSF4Q08170 494 aaKnown RBP3.17□□□□□ -1.9
VMP1-216ENST00000592790 ZP4Q12836 540 aa3.17□□□□□ -1.9
VMP1-216ENST00000592790 MICBQ29980 383 aa3.17□□□□□ -1.9
VMP1-216ENST00000592790 LINC00114Q6XXX2 140 aa3.17□□□□□ -1.9
VMP1-216ENST00000592790 GPR137CQ8N3F9 429 aa3.17□□□□□ -1.9
VMP1-216ENST00000592790 NANPQ8TBE9 248 aa3.17□□□□□ -1.9
VMP1-216ENST00000592790 HSD17B8Q92506 261 aa3.17□□□□□ -1.9
VMP1-216ENST00000592790 HAS2Q92819 552 aa3.17□□□□□ -1.9
VMP1-216ENST00000592790 ANKRD9Q96BM1 317 aaPredicted RBP3.17□□□□□ -1.9
VMP1-216ENST00000592790 CTHRC1Q96CG8 243 aa3.17□□□□□ -1.9
VMP1-216ENST00000592790 TVP23CQ96ET8 276 aa3.17□□□□□ -1.9
VMP1-216ENST00000592790 SCARF2Q96GP6 870 aaPredicted RBP3.17□□□□□ -1.9
VMP1-216ENST00000592790 ABHD14BQ96IU4 210 aa3.17□□□□□ -1.9
VMP1-216ENST00000592790 SSX3Q99909 188 aa3.17□□□□□ -1.9
VMP1-216ENST00000592790 NRIP2Q9BQI9 281 aa3.17□□□□□ -1.9
VMP1-216ENST00000592790 RIMS4Q9H426 269 aaPredicted RBP3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms