RNA–Protein interactions for RNA: ENST00000592546.5

RFX2-222, Transcript of regulatory factor X2, human

APPRIS ALT1 TSL 2 BASIC

Gene RFX2, Length 2,578 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RFX2-222	ENST00000592546	SPACA1	Q9HBV2	294 aa		12.84	□□□□□ -0.35
RFX2-222	ENST00000592546	EMC9	Q9Y3B6	208 aa		12.84	□□□□□ -0.35
RFX2-222	ENST00000592546	TNRC18	O15417	2968 aa	Predicted RBP	12.84	□□□□□ -0.35
RFX2-222	ENST00000592546	SHISA7	A6NL88	538 aa		12.83	□□□□□ -0.35
RFX2-222	ENST00000592546	OR6A2	O95222	327 aa		12.83	□□□□□ -0.35
RFX2-222	ENST00000592546	ISG15	P05161	165 aa		12.83	□□□□□ -0.35
RFX2-222	ENST00000592546	HOXB5	P09067	269 aa		12.83	□□□□□ -0.35
RFX2-222	ENST00000592546	HOXA5	P20719	270 aa		12.83	□□□□□ -0.35
RFX2-222	ENST00000592546	MAS1L	P35410	378 aa		12.83	□□□□□ -0.35
RFX2-222	ENST00000592546	SNCA	P37840	140 aa		12.83	□□□□□ -0.35
RFX2-222	ENST00000592546	ZNF239	Q16600	458 aa	Known RBP	12.83	□□□□□ -0.35
RFX2-222	ENST00000592546	PRTG	Q2VWP7	1150 aa		12.83	□□□□□ -0.35
RFX2-222	ENST00000592546	FNDC7	Q5VTL7	733 aa		12.83	□□□□□ -0.35
RFX2-222	ENST00000592546	MARCH3	Q86UD3	253 aa		12.83	□□□□□ -0.35
RFX2-222	ENST00000592546	C16orf52	Q8NHV5	167 aa		12.83	□□□□□ -0.35
RFX2-222	ENST00000592546	SGK3	Q96BR1	496 aa		12.83	□□□□□ -0.35
RFX2-222	ENST00000592546		R4GMQ9	66 aa		12.83	□□□□□ -0.35
RFX2-222	ENST00000592546	ARID1B	Q8NFD5	2236 aa	Predicted RBP	12.83	□□□□□ -0.36
RFX2-222	ENST00000592546	IGLV1-36	A0A0B4J1U3	117 aa		12.83	□□□□□ -0.36
RFX2-222	ENST00000592546	PRSS37	A4D1T9	235 aa		12.83	□□□□□ -0.36
RFX2-222	ENST00000592546	C10orf142	B7Z368	130 aa		12.83	□□□□□ -0.36
RFX2-222	ENST00000592546	TSPAN15	O95858	294 aa		12.83	□□□□□ -0.36
RFX2-222	ENST00000592546	GAPDH	P04406	335 aa	Known RBP	12.83	□□□□□ -0.36
RFX2-222	ENST00000592546	VSIG8	P0DPA2	414 aa		12.83	□□□□□ -0.36
RFX2-222	ENST00000592546	NME1	P15531	152 aa	Known RBP	12.83	□□□□□ -0.36
RFX2-222	ENST00000592546	S100A10	P60903	97 aa		12.83	□□□□□ -0.36
RFX2-222	ENST00000592546	SKP2	Q13309	424 aa		12.83	□□□□□ -0.36
RFX2-222	ENST00000592546	RHEB	Q15382	184 aa		12.83	□□□□□ -0.36
RFX2-222	ENST00000592546	OR2A2	Q6IF42	318 aa		12.83	□□□□□ -0.36
RFX2-222	ENST00000592546	PTCRA	Q6ISU1	281 aa	Predicted RBP	12.83	□□□□□ -0.36
RFX2-222	ENST00000592546		Q6ZS52	159 aa		12.83	□□□□□ -0.36
RFX2-222	ENST00000592546	ZC3HAV1	Q7Z2W4	902 aa	Known RBP	12.83	□□□□□ -0.36
RFX2-222	ENST00000592546	OR2I1P	Q8NGU4	316 aa		12.83	□□□□□ -0.36
RFX2-222	ENST00000592546	OPA3	Q9H6K4	179 aa		12.83	□□□□□ -0.36
RFX2-222	ENST00000592546	G6PC2	Q9NQR9	355 aa		12.83	□□□□□ -0.36
RFX2-222	ENST00000592546	SLC2A4RG	Q9NR83	387 aa		12.83	□□□□□ -0.36
RFX2-222	ENST00000592546	MMP17	Q9ULZ9	603 aa		12.83	□□□□□ -0.36
RFX2-222	ENST00000592546	TMEM184B	Q9Y519	407 aa	Predicted RBP	12.83	□□□□□ -0.36
RFX2-222	ENST00000592546	FREM3	P0C091	2139 aa		12.83	□□□□□ -0.36
RFX2-222	ENST00000592546		A0A1W2PPE2	198 aa		12.82	□□□□□ -0.36
RFX2-222	ENST00000592546	IFITM10	A6NMD0	228 aa		12.82	□□□□□ -0.36
RFX2-222	ENST00000592546	ST8SIA5	O15466	376 aa		12.82	□□□□□ -0.36
RFX2-222	ENST00000592546	SLC16A7	O60669	478 aa		12.82	□□□□□ -0.36
RFX2-222	ENST00000592546	ZNF217	O75362	1048 aa		12.82	□□□□□ -0.36
RFX2-222	ENST00000592546	IFNA17	P01571	189 aa		12.82	□□□□□ -0.36
RFX2-222	ENST00000592546	RNH1	P13489	461 aa	Known RBP	12.82	□□□□□ -0.36
RFX2-222	ENST00000592546	PI3	P19957	117 aa		12.82	□□□□□ -0.36
RFX2-222	ENST00000592546	THBS4	P35443	961 aa		12.82	□□□□□ -0.36
RFX2-222	ENST00000592546	GPR3	P46089	330 aa		12.82	□□□□□ -0.36
RFX2-222	ENST00000592546	UCP2	P55851	309 aa		12.82	□□□□□ -0.36
RFX2-222	ENST00000592546	INSM1	Q01101	510 aa	Predicted RBP	12.82	□□□□□ -0.36
RFX2-222	ENST00000592546	SPEM2	Q0P670	501 aa		12.82	□□□□□ -0.36
RFX2-222	ENST00000592546	CPEB4	Q17RY0	729 aa	Known RBP eCLIP	12.82	□□□□□ -0.36
RFX2-222	ENST00000592546		Q3ZCU0	254 aa		12.82	□□□□□ -0.36
RFX2-222	ENST00000592546	VAX1	Q5SQQ9	334 aa		12.82	□□□□□ -0.36
RFX2-222	ENST00000592546	NSUN5P2	Q63ZY6	315 aa		12.82	□□□□□ -0.36
RFX2-222	ENST00000592546	NUP54	Q7Z3B4	507 aa		12.82	□□□□□ -0.36
RFX2-222	ENST00000592546	PEG10	Q86TG7	708 aa	Known RBP	12.82	□□□□□ -0.36
RFX2-222	ENST00000592546	ARRDC1	Q8N5I2	433 aa		12.82	□□□□□ -0.36
RFX2-222	ENST00000592546	FAM160A2	Q8N612	972 aa	Predicted RBP	12.82	□□□□□ -0.36
RFX2-222	ENST00000592546	OR9K2	Q8NGE7	335 aa		12.82	□□□□□ -0.36
RFX2-222	ENST00000592546	OR1J1	Q8NGS3	322 aa		12.82	□□□□□ -0.36
RFX2-222	ENST00000592546	OR52N5	Q8NH56	324 aa		12.82	□□□□□ -0.36
RFX2-222	ENST00000592546	RLN3	Q8WXF3	142 aa		12.82	□□□□□ -0.36
RFX2-222	ENST00000592546	KLHDC3	Q9BQ90	382 aa		12.82	□□□□□ -0.36
RFX2-222	ENST00000592546	ANAPC10	Q9UM13	185 aa		12.82	□□□□□ -0.36
RFX2-222	ENST00000592546	C11orf98	E9PRG8	122 aa		12.82	□□□□□ -0.36
RFX2-222	ENST00000592546	SCGN	O76038	276 aa		12.82	□□□□□ -0.36
RFX2-222	ENST00000592546	JTB	O76095	146 aa		12.82	□□□□□ -0.36
RFX2-222	ENST00000592546	YIF1A	O95070	293 aa		12.82	□□□□□ -0.36
RFX2-222	ENST00000592546	LY86	O95711	162 aa		12.82	□□□□□ -0.36
RFX2-222	ENST00000592546	BPNT1	O95861	308 aa		12.82	□□□□□ -0.36
RFX2-222	ENST00000592546	IFNA2	P01563	188 aa		12.82	□□□□□ -0.36
RFX2-222	ENST00000592546	SELL	P14151	372 aa		12.82	□□□□□ -0.36
RFX2-222	ENST00000592546	GUK1	Q16774	197 aa		12.82	□□□□□ -0.36
RFX2-222	ENST00000592546	MIDN	Q504T8	468 aa		12.82	□□□□□ -0.36
RFX2-222	ENST00000592546	KDM8	Q8N371	416 aa		12.82	□□□□□ -0.36
RFX2-222	ENST00000592546	COMMD1	Q8N668	190 aa		12.82	□□□□□ -0.36
RFX2-222	ENST00000592546	OR56B1	Q8NGI3	324 aa		12.82	□□□□□ -0.36
RFX2-222	ENST00000592546	NUDT16L1	Q9BRJ7	211 aa	Known RBP	12.82	□□□□□ -0.36
RFX2-222	ENST00000592546	RTBDN	Q9BSG5	229 aa	Predicted RBP	12.82	□□□□□ -0.36
RFX2-222	ENST00000592546	PRTFDC1	Q9NRG1	225 aa		12.82	□□□□□ -0.36
RFX2-222	ENST00000592546	GSKIP	Q9P0R6	139 aa		12.82	□□□□□ -0.36
RFX2-222	ENST00000592546	FBXL17	Q9UF56	701 aa		12.82	□□□□□ -0.36
RFX2-222	ENST00000592546	OR52A1	Q9UKL2	312 aa		12.82	□□□□□ -0.36
RFX2-222	ENST00000592546	AMDHD2	Q9Y303	409 aa		12.82	□□□□□ -0.36
RFX2-222	ENST00000592546	GPR37	O15354	613 aa		12.81	□□□□□ -0.36
RFX2-222	ENST00000592546	CTLA4	P16410	223 aa		12.81	□□□□□ -0.36
RFX2-222	ENST00000592546	ZNF708	P17019	499 aa		12.81	□□□□□ -0.36
RFX2-222	ENST00000592546	FPR2	P25090	351 aa		12.81	□□□□□ -0.36
RFX2-222	ENST00000592546	ITGA3	P26006	1051 aa		12.81	□□□□□ -0.36
RFX2-222	ENST00000592546	FAM3A	P98173	230 aa		12.81	□□□□□ -0.36
RFX2-222	ENST00000592546	KIAA0895L	Q68EN5	471 aa		12.81	□□□□□ -0.36
RFX2-222	ENST00000592546	OR52N4	Q8NGI2	321 aa		12.81	□□□□□ -0.36
RFX2-222	ENST00000592546	METTL21A	Q8WXB1	218 aa		12.81	□□□□□ -0.36
RFX2-222	ENST00000592546	GTF3A	Q92664	365 aa	Known RBP	12.81	□□□□□ -0.36
RFX2-222	ENST00000592546	DGAT2	Q96PD7	388 aa		12.81	□□□□□ -0.36
RFX2-222	ENST00000592546	PARP12	Q9H0J9	701 aa	Known RBP	12.81	□□□□□ -0.36
RFX2-222	ENST00000592546	OR10A5	Q9H207	317 aa		12.81	□□□□□ -0.36
RFX2-222	ENST00000592546	UFSP2	Q9NUQ7	469 aa		12.81	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms