RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 NLRC3Q7RTR2 1065 aa8.67□□□□□ -1.02
VPS4B-207ENST00000591519 NAA40Q86UY6 237 aa8.67□□□□□ -1.02
VPS4B-207ENST00000591519 MOGAT3Q86VF5 341 aa8.67□□□□□ -1.02
VPS4B-207ENST00000591519 LINC00346Q8IVM7 164 aa8.67□□□□□ -1.02
VPS4B-207ENST00000591519 PROKR2Q8NFJ6 384 aa8.67□□□□□ -1.02
VPS4B-207ENST00000591519 OR2T33Q8NG76 320 aa8.67□□□□□ -1.02
VPS4B-207ENST00000591519 OR8B3Q8NGG8 313 aa8.67□□□□□ -1.02
VPS4B-207ENST00000591519 OR5K1Q8NHB7 308 aa8.67□□□□□ -1.02
VPS4B-207ENST00000591519 DUX5Q96PT3 197 aa8.67□□□□□ -1.02
VPS4B-207ENST00000591519 OR8B2Q96RD0 313 aa8.67□□□□□ -1.02
VPS4B-207ENST00000591519 DDOQ99489 341 aa8.67□□□□□ -1.02
VPS4B-207ENST00000591519 ATF6BQ99941 703 aa8.67□□□□□ -1.02
VPS4B-207ENST00000591519 CDADC1Q9BWV3 514 aa8.67□□□□□ -1.02
VPS4B-207ENST00000591519 SLC22A4Q9H015 551 aa8.67□□□□□ -1.02
VPS4B-207ENST00000591519 SLITRK2Q9H156 845 aa8.67□□□□□ -1.02
VPS4B-207ENST00000591519 KCNG2Q9UJ96 466 aa8.67□□□□□ -1.02
VPS4B-207ENST00000591519 MMP24Q9Y5R2 645 aa8.67□□□□□ -1.02
VPS4B-207ENST00000591519 ARRDC5A6NEK1 342 aa8.66□□□□□ -1.02
VPS4B-207ENST00000591519 FAM183AA6NL82 134 aa8.66□□□□□ -1.02
VPS4B-207ENST00000591519 RIIAD1A6NNX1 92 aa8.66□□□□□ -1.02
VPS4B-207ENST00000591519 F5H5K5 113 aa8.66□□□□□ -1.02
VPS4B-207ENST00000591519 PHYHO14832 338 aa8.66□□□□□ -1.02
VPS4B-207ENST00000591519 TNFRSF13BO14836 293 aaPredicted RBP8.66□□□□□ -1.02
VPS4B-207ENST00000591519 CLUP10909 449 aa8.66□□□□□ -1.02
VPS4B-207ENST00000591519 OTX1P32242 354 aaPredicted RBP8.66□□□□□ -1.02
VPS4B-207ENST00000591519 RPS27P42677 84 aaKnown RBP8.66□□□□□ -1.02
VPS4B-207ENST00000591519 PITPNBP48739 271 aa8.66□□□□□ -1.02
VPS4B-207ENST00000591519 NPY4RP50391 375 aa8.66□□□□□ -1.02
VPS4B-207ENST00000591519 DAPP51397 102 aa8.66□□□□□ -1.02
VPS4B-207ENST00000591519 MALLQ13021 153 aa8.66□□□□□ -1.02
VPS4B-207ENST00000591519 FAM201AQ5SY85 155 aa8.66□□□□□ -1.02
VPS4B-207ENST00000591519 ZNF362Q5T0B9 420 aaPredicted RBP8.66□□□□□ -1.02
VPS4B-207ENST00000591519 WDR25Q64LD2 544 aaPredicted RBP8.66□□□□□ -1.02
VPS4B-207ENST00000591519 CD300LDQ6UXZ3 194 aa8.66□□□□□ -1.02
VPS4B-207ENST00000591519 LNX2Q8N448 690 aa8.66□□□□□ -1.02
VPS4B-207ENST00000591519 BHLHE23Q8NDY6 225 aa8.66□□□□□ -1.02
VPS4B-207ENST00000591519 OR2AJ1Q8NGZ0 328 aa8.66□□□□□ -1.02
VPS4B-207ENST00000591519 ZNRF4Q8WWF5 429 aa8.66□□□□□ -1.02
VPS4B-207ENST00000591519 PITX2Q99697 317 aa8.66□□□□□ -1.02
VPS4B-207ENST00000591519 WDR76Q9H967 626 aa8.66□□□□□ -1.02
VPS4B-207ENST00000591519 UNKLQ9H9P5 680 aaKnown RBP8.66□□□□□ -1.02
VPS4B-207ENST00000591519 PAPOLBQ9NRJ5 636 aaKnown RBP8.66□□□□□ -1.02
VPS4B-207ENST00000591519 CLN8Q9UBY8 286 aa8.66□□□□□ -1.02
VPS4B-207ENST00000591519 SOX21Q9Y651 276 aaPredicted RBP8.66□□□□□ -1.02
VPS4B-207ENST00000591519 IGHV3-64DA0A0J9YX35 117 aa8.65□□□□□ -1.02
VPS4B-207ENST00000591519 ANKRD65E5RJM6 399 aa8.65□□□□□ -1.02
VPS4B-207ENST00000591519 G3V2T6 193 aa8.65□□□□□ -1.02
VPS4B-207ENST00000591519 NDUFA2O43678 99 aa8.65□□□□□ -1.02
VPS4B-207ENST00000591519 GMDSO60547 372 aa8.65□□□□□ -1.02
VPS4B-207ENST00000591519 IFNGP01579 166 aa8.65□□□□□ -1.02
VPS4B-207ENST00000591519 LCATP04180 440 aa8.65□□□□□ -1.02
VPS4B-207ENST00000591519 LIPFP07098 398 aa8.65□□□□□ -1.02
VPS4B-207ENST00000591519 FCGR1AP12314 374 aa8.65□□□□□ -1.02
VPS4B-207ENST00000591519 OSMP13725 252 aa8.65□□□□□ -1.02
VPS4B-207ENST00000591519 IRF2P14316 349 aa8.65□□□□□ -1.02
VPS4B-207ENST00000591519 ZNF3P17036 446 aa8.65□□□□□ -1.02
VPS4B-207ENST00000591519 GRK5P34947 590 aa8.65□□□□□ -1.02
VPS4B-207ENST00000591519 TPTEP56180 551 aa8.65□□□□□ -1.02
VPS4B-207ENST00000591519 ACTR3P61158 418 aa8.65□□□□□ -1.02
VPS4B-207ENST00000591519 MPPED2Q15777 294 aa8.65□□□□□ -1.02
VPS4B-207ENST00000591519 OCLNQ16625 522 aa8.65□□□□□ -1.02
VPS4B-207ENST00000591519 C11orf91Q3C1V1 193 aa8.65□□□□□ -1.02
VPS4B-207ENST00000591519 LYPD2Q6UXB3 125 aa8.65□□□□□ -1.02
VPS4B-207ENST00000591519 PGAP1Q75T13 922 aa8.65□□□□□ -1.02
VPS4B-207ENST00000591519 OR10S1Q8NGN2 331 aa8.65□□□□□ -1.02
VPS4B-207ENST00000591519 OR6K6Q8NGW6 343 aa8.65□□□□□ -1.02
VPS4B-207ENST00000591519 OR11L1Q8NGX0 322 aa8.65□□□□□ -1.02
VPS4B-207ENST00000591519 DUS3LQ96G46 650 aaKnown RBP8.65□□□□□ -1.02
VPS4B-207ENST00000591519 MAP6Q96JE9 813 aa8.65□□□□□ -1.02
VPS4B-207ENST00000591519 RAB3IPQ96QF0 476 aaPredicted RBP8.65□□□□□ -1.02
VPS4B-207ENST00000591519 PKP2Q99959 881 aa8.65□□□□□ -1.02
VPS4B-207ENST00000591519 NUDT16L1Q9BRJ7 211 aaKnown RBP8.65□□□□□ -1.02
VPS4B-207ENST00000591519 NOX4Q9NPH5 578 aa8.65□□□□□ -1.02
VPS4B-207ENST00000591519 KRT84Q9NSB2 600 aa8.65□□□□□ -1.02
VPS4B-207ENST00000591519 MRPL22Q9NWU5 206 aaKnown RBP8.65□□□□□ -1.02
VPS4B-207ENST00000591519 BAIAP2Q9UQB8 552 aa8.65□□□□□ -1.02
VPS4B-207ENST00000591519 NOP16Q9Y3C1 178 aaKnown RBP8.65□□□□□ -1.02
VPS4B-207ENST00000591519 MEGF8Q7Z7M0 2845 aa8.65□□□□□ -1.03
VPS4B-207ENST00000591519 A0A1B0GUS0 222 aa8.64□□□□□ -1.03
VPS4B-207ENST00000591519 CD300LBA8K4G0 201 aa8.64□□□□□ -1.03
VPS4B-207ENST00000591519 M0R129 80 aa8.64□□□□□ -1.03
VPS4B-207ENST00000591519 FAM20BO75063 409 aa8.64□□□□□ -1.03
VPS4B-207ENST00000591519 ALX3O95076 343 aa8.64□□□□□ -1.03
VPS4B-207ENST00000591519 SPARCP09486 303 aa8.64□□□□□ -1.03
VPS4B-207ENST00000591519 ZNF823P16415 610 aa8.64□□□□□ -1.03
VPS4B-207ENST00000591519 SPI1P17947 270 aa8.64□□□□□ -1.03
VPS4B-207ENST00000591519 KCNJ8Q15842 424 aa8.64□□□□□ -1.03
VPS4B-207ENST00000591519 PCK2Q16822 640 aa8.64□□□□□ -1.03
VPS4B-207ENST00000591519 DEFB112Q30KQ8 113 aa8.64□□□□□ -1.03
VPS4B-207ENST00000591519 KLHL12Q53G59 568 aa8.64□□□□□ -1.03
VPS4B-207ENST00000591519 CD276Q5ZPR3 534 aa8.64□□□□□ -1.03
VPS4B-207ENST00000591519 PLBD1Q6P4A8 553 aa8.64□□□□□ -1.03
VPS4B-207ENST00000591519 FAHD1Q6P587 224 aa8.64□□□□□ -1.03
VPS4B-207ENST00000591519 DRAM2Q6UX65 266 aa8.64□□□□□ -1.03
VPS4B-207ENST00000591519 Q6YL49 198 aa8.64□□□□□ -1.03
VPS4B-207ENST00000591519 SPATC1Q76KD6 591 aa8.64□□□□□ -1.03
VPS4B-207ENST00000591519 ZDHHC13Q8IUH4 622 aa8.64□□□□□ -1.03
VPS4B-207ENST00000591519 SPERTQ8NA61 448 aa8.64□□□□□ -1.03
VPS4B-207ENST00000591519 OR2T4Q8NH00 348 aa8.64□□□□□ -1.03
VPS4B-207ENST00000591519 SPRYD4Q8WW59 207 aaPredicted RBP8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms