RNA–Protein interactions for RNA: ENST00000590181.5

LIG3-212, Transcript of DNA ligase 3, humanhuman

TSL 1 (best)

Gene LIG3, Length 1,156 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-212ENST00000590181 OR8B3Q8NGG8 313 aa8.81□□□□□ -1
LIG3-212ENST00000590181 OR8S1Q8NH09 359 aa8.81□□□□□ -1
LIG3-212ENST00000590181 OTULINQ96BN8 352 aa8.81□□□□□ -1
LIG3-212ENST00000590181 C12orf43Q96C57 262 aaKnown RBP8.81□□□□□ -1
LIG3-212ENST00000590181 OR8B2Q96RD0 313 aa8.81□□□□□ -1
LIG3-212ENST00000590181 SSBP3Q9BWW4 388 aaPredicted RBP8.81□□□□□ -1
LIG3-212ENST00000590181 GABARAPL1Q9H0R8 117 aa8.81□□□□□ -1
LIG3-212ENST00000590181 OR51V1Q9H2C8 321 aa8.81□□□□□ -1
LIG3-212ENST00000590181 METTL17Q9H7H0 456 aaPredicted RBP8.81□□□□□ -1
LIG3-212ENST00000590181 KRT84Q9NSB2 600 aa8.81□□□□□ -1
LIG3-212ENST00000590181 LAMP5Q9UJQ1 280 aa8.81□□□□□ -1
LIG3-212ENST00000590181 TMEM210A6NLX4 147 aa8.8□□□□□ -1
LIG3-212ENST00000590181 F5H5P2 479 aa8.8□□□□□ -1
LIG3-212ENST00000590181 TRIM77I1YAP6 450 aa8.8□□□□□ -1
LIG3-212ENST00000590181 RGS9O75916 674 aaPredicted RBP8.8□□□□□ -1
LIG3-212ENST00000590181 RPSAP08865 295 aaKnown RBP8.8□□□□□ -1
LIG3-212ENST00000590181 RPS2P15880 293 aaKnown RBP8.8□□□□□ -1
LIG3-212ENST00000590181 ALOX5APP20292 161 aa8.8□□□□□ -1
LIG3-212ENST00000590181 EPHA1P21709 976 aa8.8□□□□□ -1
LIG3-212ENST00000590181 SLC2A5P22732 501 aa8.8□□□□□ -1
LIG3-212ENST00000590181 CA6P23280 308 aa8.8□□□□□ -1
LIG3-212ENST00000590181 GNALP38405 381 aa8.8□□□□□ -1
LIG3-212ENST00000590181 PRKXP51817 358 aa8.8□□□□□ -1
LIG3-212ENST00000590181 GNB2P62879 340 aa8.8□□□□□ -1
LIG3-212ENST00000590181 FAM3AP98173 230 aa8.8□□□□□ -1
LIG3-212ENST00000590181 POU4F2Q12837 409 aa8.8□□□□□ -1
LIG3-212ENST00000590181 ZNF154Q13106 437 aa8.8□□□□□ -1
LIG3-212ENST00000590181 MAB21L1Q13394 359 aa8.8□□□□□ -1
LIG3-212ENST00000590181 OR8B8Q15620 311 aa8.8□□□□□ -1
LIG3-212ENST00000590181 SNAI3Q3KNW1 292 aa8.8□□□□□ -1
LIG3-212ENST00000590181 KLHL12Q53G59 568 aa8.8□□□□□ -1
LIG3-212ENST00000590181 GLYATL3Q5SZD4 288 aa8.8□□□□□ -1
LIG3-212ENST00000590181 NXNL2Q5VZ03 156 aa8.8□□□□□ -1
LIG3-212ENST00000590181 KDM4DQ6B0I6 523 aa8.8□□□□□ -1
LIG3-212ENST00000590181 RBMS3Q6XE24 437 aaKnown RBP8.8□□□□□ -1
LIG3-212ENST00000590181 PRSS45Q7RTY3 260 aa8.8□□□□□ -1
LIG3-212ENST00000590181 TMEM179BQ7Z7N9 219 aa8.8□□□□□ -1
LIG3-212ENST00000590181 NAA40Q86UY6 237 aa8.8□□□□□ -1
LIG3-212ENST00000590181 MOGAT3Q86VF5 341 aa8.8□□□□□ -1
LIG3-212ENST00000590181 GID4Q8IVV7 300 aa8.8□□□□□ -1
LIG3-212ENST00000590181 GALNT4Q8N4A0 578 aa8.8□□□□□ -1
LIG3-212ENST00000590181 OR10AD1Q8NGE0 317 aa8.8□□□□□ -1
LIG3-212ENST00000590181 THEM6Q8WUY1 208 aa8.8□□□□□ -1
LIG3-212ENST00000590181 ZNRF4Q8WWF5 429 aa8.8□□□□□ -1
LIG3-212ENST00000590181 TRUB1Q8WWH5 349 aaKnown RBP8.8□□□□□ -1
LIG3-212ENST00000590181 RAB40AQ8WXH6 277 aa8.8□□□□□ -1
LIG3-212ENST00000590181 SGK3Q96BR1 496 aa8.8□□□□□ -1
LIG3-212ENST00000590181 CENPNQ96H22 339 aaPredicted RBP8.8□□□□□ -1
LIG3-212ENST00000590181 REEP6Q96HR9 211 aa8.8□□□□□ -1
LIG3-212ENST00000590181 ADAT1Q9BUB4 502 aaKnown RBP8.8□□□□□ -1
LIG3-212ENST00000590181 TMPRSS13Q9BYE2 586 aa8.8□□□□□ -1
LIG3-212ENST00000590181 DNTTIP1Q9H147 329 aa8.8□□□□□ -1
LIG3-212ENST00000590181 TVP23BQ9NYZ1 205 aa8.8□□□□□ -1
LIG3-212ENST00000590181 ERVK-18Q9QC07 812 aa8.8□□□□□ -1
LIG3-212ENST00000590181 KAAG1Q9UBP8 84 aa8.8□□□□□ -1
LIG3-212ENST00000590181 INSIG2Q9Y5U4 225 aa8.8□□□□□ -1
LIG3-212ENST00000590181 AUP1Q9Y679 476 aa8.8□□□□□ -1
LIG3-212ENST00000590181 PRKDCP78527 4128 aaKnown RBP8.79□□□□□ -1
LIG3-212ENST00000590181 CMYA5Q8N3K9 4069 aa8.79□□□□□ -1
LIG3-212ENST00000590181 KIR2DS1A0A191URI9 304 aa8.79□□□□□ -1
LIG3-212ENST00000590181 FAM183AA6NL82 134 aa8.79□□□□□ -1
LIG3-212ENST00000590181 DHRS7CA6NNS2 312 aa8.79□□□□□ -1
LIG3-212ENST00000590181 CEACAM18A8MTB9 384 aa8.79□□□□□ -1
LIG3-212ENST00000590181 LGALS8O00214 317 aa8.79□□□□□ -1
LIG3-212ENST00000590181 TBX1O43435 398 aa8.79□□□□□ -1
LIG3-212ENST00000590181 MTRF1O75570 445 aaKnown RBP8.79□□□□□ -1
LIG3-212ENST00000590181 CST4P01036 141 aa8.79□□□□□ -1
LIG3-212ENST00000590181 LHBP01229 141 aa8.79□□□□□ -1
LIG3-212ENST00000590181 CLUP10909 449 aa8.79□□□□□ -1
LIG3-212ENST00000590181 PRKACGP22612 351 aa8.79□□□□□ -1
LIG3-212ENST00000590181 PSMB10P40306 273 aa8.79□□□□□ -1
LIG3-212ENST00000590181 MAP2K3P46734 347 aa8.79□□□□□ -1
LIG3-212ENST00000590181 COMPP49747 757 aaPredicted RBP8.79□□□□□ -1
LIG3-212ENST00000590181 GSK3AP49840 483 aa8.79□□□□□ -1
LIG3-212ENST00000590181 HILS1P60008 231 aa8.79□□□□□ -1
LIG3-212ENST00000590181 PSMA6P60900 246 aaKnown RBP8.79□□□□□ -1
LIG3-212ENST00000590181 RPS7P62081 194 aaKnown RBP8.79□□□□□ -1
LIG3-212ENST00000590181 LCN2P80188 198 aa8.79□□□□□ -1
LIG3-212ENST00000590181 EFNB1P98172 346 aa8.79□□□□□ -1
LIG3-212ENST00000590181 PAX8Q06710 450 aa8.79□□□□□ -1
LIG3-212ENST00000590181 MICBQ29980 383 aa8.79□□□□□ -1
LIG3-212ENST00000590181 ZNF829Q3KNS6 432 aaPredicted RBP8.79□□□□□ -1
LIG3-212ENST00000590181 FAM76BQ5HYJ3 339 aa8.79□□□□□ -1
LIG3-212ENST00000590181 OTPQ5XKR4 325 aa8.79□□□□□ -1
LIG3-212ENST00000590181 MEPCEQ7L2J0 689 aaKnown RBP8.79□□□□□ -1
LIG3-212ENST00000590181 KRT77Q7Z794 578 aa8.79□□□□□ -1
LIG3-212ENST00000590181 ZNF679Q8IYX0 411 aa8.79□□□□□ -1
LIG3-212ENST00000590181 BPIFB2Q8N4F0 458 aa8.79□□□□□ -1
LIG3-212ENST00000590181 CCDC54Q8NEL0 328 aa8.79□□□□□ -1
LIG3-212ENST00000590181 OR10Z1Q8NGY1 313 aa8.79□□□□□ -1
LIG3-212ENST00000590181 FAM216AQ8WUB2 273 aa8.79□□□□□ -1
LIG3-212ENST00000590181 RFKQ969G6 155 aa8.79□□□□□ -1
LIG3-212ENST00000590181 PGAM5Q96HS1 289 aa8.79□□□□□ -1
LIG3-212ENST00000590181 HIST1H2AAQ96QV6 131 aa8.79□□□□□ -1
LIG3-212ENST00000590181 MICU1Q9BPX6 476 aa8.79□□□□□ -1
LIG3-212ENST00000590181 TMEM246Q9BRR3 403 aa8.79□□□□□ -1
LIG3-212ENST00000590181 RTL8AQ9BWD3 113 aa8.79□□□□□ -1
LIG3-212ENST00000590181 MOB1AQ9H8S9 216 aa8.79□□□□□ -1
LIG3-212ENST00000590181 LPAR2Q9HBW0 351 aa8.79□□□□□ -1
LIG3-212ENST00000590181 CLN8Q9UBY8 286 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms