RNA–Protein interactions for RNA: ENST00000589528.1

ACTN4-211, Transcript of actinin alpha 4, humanhuman

TSL 2

Gene ACTN4, Length 441 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-211ENST00000589528 VSIG10L2P0DP72 767 aa12.48□□□□□ -0.41
ACTN4-211ENST00000589528 HIST1H1CP16403 213 aaKnown RBP12.48□□□□□ -0.41
ACTN4-211ENST00000589528 SLC6A6P31641 620 aa12.48□□□□□ -0.41
ACTN4-211ENST00000589528 OMPP47874 163 aa12.48□□□□□ -0.41
ACTN4-211ENST00000589528 SLC7A2P52569 658 aa12.48□□□□□ -0.41
ACTN4-211ENST00000589528 DLX1P56177 255 aa12.48□□□□□ -0.41
ACTN4-211ENST00000589528 FXYD6P3P58550 94 aa12.48□□□□□ -0.41
ACTN4-211ENST00000589528 KLF10Q13118 480 aa12.48□□□□□ -0.41
ACTN4-211ENST00000589528 TAF13Q15543 124 aa12.48□□□□□ -0.41
ACTN4-211ENST00000589528 GLYATL3Q5SZD4 288 aa12.48□□□□□ -0.41
ACTN4-211ENST00000589528 PGBD2Q6P3X8 592 aa12.48□□□□□ -0.41
ACTN4-211ENST00000589528 DUX4L9Q6RFH8 374 aaPredicted RBP12.48□□□□□ -0.41
ACTN4-211ENST00000589528 DPY19L4Q7Z388 723 aa12.48□□□□□ -0.41
ACTN4-211ENST00000589528 OR4S1Q8NGB4 309 aa12.48□□□□□ -0.41
ACTN4-211ENST00000589528 OR4K13Q8NH42 304 aa12.48□□□□□ -0.41
ACTN4-211ENST00000589528 FAM162AQ96A26 154 aa12.48□□□□□ -0.41
ACTN4-211ENST00000589528 COPS4Q9BT78 406 aa12.48□□□□□ -0.41
ACTN4-211ENST00000589528 IFT27Q9BW83 186 aa12.48□□□□□ -0.41
ACTN4-211ENST00000589528 FN3KQ9H479 309 aa12.48□□□□□ -0.41
ACTN4-211ENST00000589528 RNPEPL1Q9HAU8 725 aa12.48□□□□□ -0.41
ACTN4-211ENST00000589528 RAB18Q9NP72 206 aa12.48□□□□□ -0.41
ACTN4-211ENST00000589528 PNRC2Q9NPJ4 139 aaKnown RBP12.48□□□□□ -0.41
ACTN4-211ENST00000589528 DUX4Q9UBX2 424 aa12.48□□□□□ -0.41
ACTN4-211ENST00000589528 KCNG2Q9UJ96 466 aa12.48□□□□□ -0.41
ACTN4-211ENST00000589528 PRPF19Q9UMS4 504 aaKnown RBP12.48□□□□□ -0.41
ACTN4-211ENST00000589528 ENPP4Q9Y6X5 453 aa12.48□□□□□ -0.41
ACTN4-211ENST00000589528 A0A1W2PQ09 198 aa12.47□□□□□ -0.41
ACTN4-211ENST00000589528 NKX6-3A6NJ46 265 aa12.47□□□□□ -0.41
ACTN4-211ENST00000589528 NAA10P41227 235 aaPredicted RBP12.47□□□□□ -0.41
ACTN4-211ENST00000589528 UBE2E1P51965 193 aa12.47□□□□□ -0.41
ACTN4-211ENST00000589528 EFNB2P52799 333 aa12.47□□□□□ -0.41
ACTN4-211ENST00000589528 LIPEQ05469 1076 aa12.47□□□□□ -0.41
ACTN4-211ENST00000589528 ACSM1Q08AH1 577 aa12.47□□□□□ -0.41
ACTN4-211ENST00000589528 BLMHQ13867 455 aa12.47□□□□□ -0.41
ACTN4-211ENST00000589528 KRT72Q14CN4 511 aa12.47□□□□□ -0.41
ACTN4-211ENST00000589528 LY6EQ16553 131 aa12.47□□□□□ -0.41
ACTN4-211ENST00000589528 NSUN5P1Q3KNT7 163 aa12.47□□□□□ -0.41
ACTN4-211ENST00000589528 OXLD1Q5BKU9 147 aa12.47□□□□□ -0.41
ACTN4-211ENST00000589528 NCR3LG1Q68D85 454 aa12.47□□□□□ -0.41
ACTN4-211ENST00000589528 DRAM2Q6UX65 266 aa12.47□□□□□ -0.41
ACTN4-211ENST00000589528 PNKDQ8N490 385 aa12.47□□□□□ -0.41
ACTN4-211ENST00000589528 OR51G2Q8NGK0 314 aa12.47□□□□□ -0.41
ACTN4-211ENST00000589528 OR52J3Q8NH60 311 aa12.47□□□□□ -0.41
ACTN4-211ENST00000589528 MAP6Q96JE9 813 aa12.47□□□□□ -0.41
ACTN4-211ENST00000589528 SSX3Q99909 188 aa12.47□□□□□ -0.41
ACTN4-211ENST00000589528 DCTN5Q9BTE1 182 aa12.47□□□□□ -0.41
ACTN4-211ENST00000589528 NECAP2Q9NVZ3 263 aa12.47□□□□□ -0.41
ACTN4-211ENST00000589528 ACOT8O14734 319 aa12.46□□□□□ -0.41
ACTN4-211ENST00000589528 TBX1O43435 398 aa12.46□□□□□ -0.41
ACTN4-211ENST00000589528 XRCC2O43543 280 aa12.46□□□□□ -0.41
ACTN4-211ENST00000589528 TIPRLO75663 272 aa12.46□□□□□ -0.41
ACTN4-211ENST00000589528 POU1F1P28069 291 aa12.46□□□□□ -0.41
ACTN4-211ENST00000589528 DDOSTP39656 456 aa12.46□□□□□ -0.41
ACTN4-211ENST00000589528 RPS27P42677 84 aaKnown RBP12.46□□□□□ -0.41
ACTN4-211ENST00000589528 GMFBP60983 142 aa12.46□□□□□ -0.41
ACTN4-211ENST00000589528 ELF3P78545 371 aaPredicted RBP12.46□□□□□ -0.41
ACTN4-211ENST00000589528 ZBTB46Q86UZ6 589 aa12.46□□□□□ -0.41
ACTN4-211ENST00000589528 LYG1Q8N1E2 194 aa12.46□□□□□ -0.41
ACTN4-211ENST00000589528 DTX3Q8N9I9 347 aa12.46□□□□□ -0.41
ACTN4-211ENST00000589528 SDR9C7Q8NEX9 313 aa12.46□□□□□ -0.41
ACTN4-211ENST00000589528 OR9Q1Q8NGQ5 310 aa12.46□□□□□ -0.41
ACTN4-211ENST00000589528 C12orf43Q96C57 262 aaKnown RBP12.46□□□□□ -0.41
ACTN4-211ENST00000589528 RCN3Q96D15 328 aa12.46□□□□□ -0.41
ACTN4-211ENST00000589528 OR52D1Q9H346 318 aa12.46□□□□□ -0.41
ACTN4-211ENST00000589528 METTL8Q9H825 291 aaKnown RBP12.46□□□□□ -0.41
ACTN4-211ENST00000589528 CMTM6Q9NX76 183 aa12.46□□□□□ -0.41
ACTN4-211ENST00000589528 ADA2Q9NZK5 511 aa12.46□□□□□ -0.41
ACTN4-211ENST00000589528 GMPR2Q9P2T1 348 aaKnown RBP12.46□□□□□ -0.41
ACTN4-211ENST00000589528 MAB21L2Q9Y586 359 aa12.46□□□□□ -0.41
ACTN4-211ENST00000589528 NBEAL2Q6ZNJ1 2754 aa12.46□□□□□ -0.42
ACTN4-211ENST00000589528 TRBV4-1A0A0J9YWV2 114 aa12.45□□□□□ -0.42
ACTN4-211ENST00000589528 ARPC3O15145 178 aa12.45□□□□□ -0.42
ACTN4-211ENST00000589528 SLC2A1P11166 492 aa12.45□□□□□ -0.42
ACTN4-211ENST00000589528 RHCEP18577 417 aa12.45□□□□□ -0.42
ACTN4-211ENST00000589528 KIR2DS4P43632 304 aa12.45□□□□□ -0.42
ACTN4-211ENST00000589528 PRKXP51817 358 aa12.45□□□□□ -0.42
ACTN4-211ENST00000589528 CSNK2BP67870 215 aa12.45□□□□□ -0.42
ACTN4-211ENST00000589528 CPLX4Q7Z7G2 160 aa12.45□□□□□ -0.42
ACTN4-211ENST00000589528 Q8N7P7 452 aa12.45□□□□□ -0.42
ACTN4-211ENST00000589528 BEND2Q8NDZ0 799 aa12.45□□□□□ -0.42
ACTN4-211ENST00000589528 PROKR2Q8NFJ6 384 aa12.45□□□□□ -0.42
ACTN4-211ENST00000589528 OR1M1Q8NGA1 313 aa12.45□□□□□ -0.42
ACTN4-211ENST00000589528 OR5T2Q8NGG2 359 aa12.45□□□□□ -0.42
ACTN4-211ENST00000589528 C8orf46Q8TAG6 207 aa12.45□□□□□ -0.42
ACTN4-211ENST00000589528 PPP1R35Q8TAP8 253 aa12.45□□□□□ -0.42
ACTN4-211ENST00000589528 CFHR4Q92496 578 aa12.45□□□□□ -0.42
ACTN4-211ENST00000589528 ITPKCQ96DU7 683 aa12.45□□□□□ -0.42
ACTN4-211ENST00000589528 NPFFR1Q9GZQ6 430 aa12.45□□□□□ -0.42
ACTN4-211ENST00000589528 RANBP3Q9H6Z4 567 aaPredicted RBP12.45□□□□□ -0.42
ACTN4-211ENST00000589528 CENPMQ9NSP4 180 aa12.45□□□□□ -0.42
ACTN4-211ENST00000589528 AURKAIP1Q9NWT8 199 aaPredicted RBP12.45□□□□□ -0.42
ACTN4-211ENST00000589528 MRPL22Q9NWU5 206 aaKnown RBP12.45□□□□□ -0.42
ACTN4-211ENST00000589528 SF3B6Q9Y3B4 125 aaKnown RBP12.45□□□□□ -0.42
ACTN4-211ENST00000589528 OR6C68A6NDL8 312 aa12.44□□□□□ -0.42
ACTN4-211ENST00000589528 M0R1W7 72 aa12.44□□□□□ -0.42
ACTN4-211ENST00000589528 FBXO24O75426 580 aa12.44□□□□□ -0.42
ACTN4-211ENST00000589528 NDUFB7P17568 137 aa12.44□□□□□ -0.42
ACTN4-211ENST00000589528 GNALP38405 381 aa12.44□□□□□ -0.42
ACTN4-211ENST00000589528 GSK3BP49841 420 aa12.44□□□□□ -0.42
ACTN4-211ENST00000589528 SF3A3Q12874 501 aaKnown RBP eCLIP12.44□□□□□ -0.423e-7■■□□□ 14
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms