RNA–Protein interactions for RNA: ENST00000589117.5

ZNF540-206, Transcript of zinc finger protein 540, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF540, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-206ENST00000589117 PRKXP51817 358 aa6.54□□□□□ -1.36
ZNF540-206ENST00000589117 DSCR4P56555 118 aaPredicted RBP6.54□□□□□ -1.36
ZNF540-206ENST00000589117 FOXL2P58012 376 aa6.54□□□□□ -1.36
ZNF540-206ENST00000589117 TAS2R31P59538 309 aa6.54□□□□□ -1.36
ZNF540-206ENST00000589117 HLXQ14774 488 aaPredicted RBP6.54□□□□□ -1.36
ZNF540-206ENST00000589117 CARD17Q5XLA6 110 aa6.54□□□□□ -1.36
ZNF540-206ENST00000589117 PMS2CLQ68D20 193 aa6.54□□□□□ -1.36
ZNF540-206ENST00000589117 OR10K2Q6IF99 312 aa6.54□□□□□ -1.36
ZNF540-206ENST00000589117 GSG1LQ6UXU4 331 aa6.54□□□□□ -1.36
ZNF540-206ENST00000589117 NHLRC1Q6VVB1 395 aa6.54□□□□□ -1.36
ZNF540-206ENST00000589117 SLC51BQ86UW2 128 aa6.54□□□□□ -1.36
ZNF540-206ENST00000589117 TMEM17Q86X19 198 aa6.54□□□□□ -1.36
ZNF540-206ENST00000589117 LYPD6Q86Y78 171 aa6.54□□□□□ -1.36
ZNF540-206ENST00000589117 TMEM156Q8N614 296 aa6.54□□□□□ -1.36
ZNF540-206ENST00000589117 LRRC20Q8TCA0 184 aa6.54□□□□□ -1.36
ZNF540-206ENST00000589117 MR1Q95460 341 aa6.54□□□□□ -1.36
ZNF540-206ENST00000589117 FBXW5Q969U6 566 aa6.54□□□□□ -1.36
ZNF540-206ENST00000589117 ADAT3Q96EY9 351 aaPredicted RBP6.54□□□□□ -1.36
ZNF540-206ENST00000589117 S100A13Q99584 98 aa6.54□□□□□ -1.36
ZNF540-206ENST00000589117 TINAGL1Q9GZM7 467 aaPredicted RBP6.54□□□□□ -1.36
ZNF540-206ENST00000589117 CST11Q9H112 138 aa6.54□□□□□ -1.36
ZNF540-206ENST00000589117 MED9Q9NWA0 146 aa6.54□□□□□ -1.36
ZNF540-206ENST00000589117 FBXL2Q9UKC9 423 aa6.54□□□□□ -1.36
ZNF540-206ENST00000589117 LHFPL6Q9Y693 200 aa6.54□□□□□ -1.36
ZNF540-206ENST00000589117 CHCHD2Q9Y6H1 151 aaPredicted RBP6.54□□□□□ -1.36
ZNF540-206ENST00000589117 ALPK2Q86TB3 2170 aa6.54□□□□□ -1.36
ZNF540-206ENST00000589117 STK17BO94768 372 aa6.54□□□□□ -1.36
ZNF540-206ENST00000589117 SIX6O95475 246 aa6.54□□□□□ -1.36
ZNF540-206ENST00000589117 IGHEP01854 428 aa6.54□□□□□ -1.36
ZNF540-206ENST00000589117 VSIG8P0DPA2 414 aa6.54□□□□□ -1.36
ZNF540-206ENST00000589117 ICAM2P13598 275 aa6.54□□□□□ -1.36
ZNF540-206ENST00000589117 ZNF28P17035 718 aa6.54□□□□□ -1.36
ZNF540-206ENST00000589117 MSR1P21757 451 aa6.54□□□□□ -1.36
ZNF540-206ENST00000589117 CALCRP30988 508 aa6.54□□□□□ -1.36
ZNF540-206ENST00000589117 CSNK1A1P48729 337 aa6.54□□□□□ -1.36
ZNF540-206ENST00000589117 CX3CR1P49238 355 aa6.54□□□□□ -1.36
ZNF540-206ENST00000589117 ZNF84P51523 738 aa6.54□□□□□ -1.36
ZNF540-206ENST00000589117 ZNF121P58317 390 aaPredicted RBP6.54□□□□□ -1.36
ZNF540-206ENST00000589117 IL13RA1P78552 427 aa6.54□□□□□ -1.36
ZNF540-206ENST00000589117 CYCSP99999 105 aaKnown RBP6.54□□□□□ -1.36
ZNF540-206ENST00000589117 SRSF2Q01130 221 aaKnown RBP6.54□□□□□ -1.36
ZNF540-206ENST00000589117 OC90Q02509 493 aaPredicted RBP6.54□□□□□ -1.36
ZNF540-206ENST00000589117 ECH1Q13011 328 aa6.54□□□□□ -1.36
ZNF540-206ENST00000589117 DHRS2Q13268 280 aa6.54□□□□□ -1.36
ZNF540-206ENST00000589117 SGCAQ16586 387 aa6.54□□□□□ -1.36
ZNF540-206ENST00000589117 HIST3H3Q16695 136 aa6.54□□□□□ -1.36
ZNF540-206ENST00000589117 PNLIPRP3Q17RR3 467 aa6.54□□□□□ -1.36
ZNF540-206ENST00000589117 TOR2AQ5JU69 321 aa6.54□□□□□ -1.36
ZNF540-206ENST00000589117 RTL6Q6ICC9 239 aa6.54□□□□□ -1.36
ZNF540-206ENST00000589117 ZNF529Q6P280 563 aa6.54□□□□□ -1.36
ZNF540-206ENST00000589117 TMEM65Q6PI78 240 aa6.54□□□□□ -1.36
ZNF540-206ENST00000589117 CFAP77Q6ZQR2 320 aa6.54□□□□□ -1.36
ZNF540-206ENST00000589117 BIVMQ86UB2 503 aa6.54□□□□□ -1.36
ZNF540-206ENST00000589117 CD163Q86VB7 1156 aa6.54□□□□□ -1.36
ZNF540-206ENST00000589117 SLC25A42Q86VD7 318 aa6.54□□□□□ -1.36
ZNF540-206ENST00000589117 GALNT16Q8N428 558 aa6.54□□□□□ -1.36
ZNF540-206ENST00000589117 WDSUB1Q8N9V3 476 aa6.54□□□□□ -1.36
ZNF540-206ENST00000589117 STEAP2Q8NFT2 490 aa6.54□□□□□ -1.36
ZNF540-206ENST00000589117 C10orf35Q96D05 121 aa6.54□□□□□ -1.36
ZNF540-206ENST00000589117 RAB3CQ96E17 227 aa6.54□□□□□ -1.36
ZNF540-206ENST00000589117 CPNE2Q96FN4 548 aaPredicted RBP6.54□□□□□ -1.36
ZNF540-206ENST00000589117 PGAM5Q96HS1 289 aa6.54□□□□□ -1.36
ZNF540-206ENST00000589117 TMEM41AQ96HV5 264 aa6.54□□□□□ -1.36
ZNF540-206ENST00000589117 SELENOIQ9C0D9 397 aa6.54□□□□□ -1.36
ZNF540-206ENST00000589117 AP5S1Q9NUS5 200 aa6.54□□□□□ -1.36
ZNF540-206ENST00000589117 PRR13Q9NZ81 148 aa6.54□□□□□ -1.36
ZNF540-206ENST00000589117 ZNF224Q9NZL3 707 aa6.54□□□□□ -1.36
ZNF540-206ENST00000589117 MRPS28Q9Y2Q9 187 aaKnown RBP6.54□□□□□ -1.36
ZNF540-206ENST00000589117 PTRH2Q9Y3E5 179 aaKnown RBP6.54□□□□□ -1.36
ZNF540-206ENST00000589117 U3KQE9 123 aa6.54□□□□□ -1.36
ZNF540-206ENST00000589117 IGHV1-45A0A0A0MS14 117 aa6.53□□□□□ -1.36
ZNF540-206ENST00000589117 LY6G6EA0A0G2JKS1 128 aa6.53□□□□□ -1.36
ZNF540-206ENST00000589117 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.53□□□□□ -1.36
ZNF540-206ENST00000589117 RPS10-NUDT3A0A1W2PQS6 291 aa6.53□□□□□ -1.36
ZNF540-206ENST00000589117 KANTRA0A1W2PQU2 76 aa6.53□□□□□ -1.36
ZNF540-206ENST00000589117 OR5H14A6NHG9 310 aa6.53□□□□□ -1.36
ZNF540-206ENST00000589117 TMEM14DPA8MWL7 114 aa6.53□□□□□ -1.36
ZNF540-206ENST00000589117 B8ZZF3 427 aa6.53□□□□□ -1.36
ZNF540-206ENST00000589117 ZNF561-AS1K7EIQ3 104 aa6.53□□□□□ -1.36
ZNF540-206ENST00000589117 DNPH1O43598 174 aa6.53□□□□□ -1.36
ZNF540-206ENST00000589117 CBR3O75828 277 aa6.53□□□□□ -1.36
ZNF540-206ENST00000589117 OR2F2O95006 317 aa6.53□□□□□ -1.36
ZNF540-206ENST00000589117 CER1O95813 267 aa6.53□□□□□ -1.36
ZNF540-206ENST00000589117 CFDP00746 253 aaPredicted RBP6.53□□□□□ -1.36
ZNF540-206ENST00000589117 OPN1LWP04000 364 aa6.53□□□□□ -1.36
ZNF540-206ENST00000589117 CSN2P05814 226 aa6.53□□□□□ -1.36
ZNF540-206ENST00000589117 FREM3P0C091 2139 aa6.53□□□□□ -1.36
ZNF540-206ENST00000589117 CTSSP25774 331 aa6.53□□□□□ -1.36
ZNF540-206ENST00000589117 P2RY4P51582 365 aa6.53□□□□□ -1.36
ZNF540-206ENST00000589117 CLDN17P56750 224 aa6.53□□□□□ -1.36
ZNF540-206ENST00000589117 UBE2MP61081 183 aaKnown RBP6.53□□□□□ -1.36
ZNF540-206ENST00000589117 QRFPP83859 136 aa6.53□□□□□ -1.36
ZNF540-206ENST00000589117 OR2F1Q13607 317 aa6.53□□□□□ -1.36
ZNF540-206ENST00000589117 NKPD1Q17RQ9 610 aa6.53□□□□□ -1.36
ZNF540-206ENST00000589117 MOGAT2Q3SYC2 334 aa6.53□□□□□ -1.36
ZNF540-206ENST00000589117 ATPAF1Q5TC12 328 aaPredicted RBP6.53□□□□□ -1.36
ZNF540-206ENST00000589117 GLIPR1L1Q6UWM5 242 aa6.53□□□□□ -1.36
ZNF540-206ENST00000589117 OVCH2Q7RTZ1 564 aa6.53□□□□□ -1.36
ZNF540-206ENST00000589117 LYG2Q86SG7 212 aa6.53□□□□□ -1.36
ZNF540-206ENST00000589117 WDR5BQ86VZ2 330 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms