RNA–Protein interactions for RNA: ENST00000588855.5

CLPTM1-209, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 1 (best)

Gene CLPTM1, Length 1,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-209ENST00000588855 ALKBH1Q13686 389 aaKnown RBP16.15■□□□□ 0.18
CLPTM1-209ENST00000588855 DOC2BQ14184 412 aa16.15■□□□□ 0.18
CLPTM1-209ENST00000588855 ZMAT1Q5H9K5 638 aa16.15■□□□□ 0.18
CLPTM1-209ENST00000588855 XAF1Q6GPH4 301 aa16.15■□□□□ 0.18
CLPTM1-209ENST00000588855 KLBQ86Z14 1044 aa16.15■□□□□ 0.18
CLPTM1-209ENST00000588855 LRRC75A-AS1Q8N1F1 130 aa16.15■□□□□ 0.18
CLPTM1-209ENST00000588855 ZNF485Q8NCK3 441 aa16.15■□□□□ 0.18
CLPTM1-209ENST00000588855 GATAD2BQ8WXI9 593 aa16.15■□□□□ 0.18
CLPTM1-209ENST00000588855 SLC30A2Q9BRI3 323 aa16.15■□□□□ 0.18
CLPTM1-209ENST00000588855 RAB1BQ9H0U4 201 aa16.15■□□□□ 0.18
CLPTM1-209ENST00000588855 MYO9AB2RTY4 2548 aa16.15■□□□□ 0.18
CLPTM1-209ENST00000588855 A0A1B0GTI1 187 aa16.14■□□□□ 0.18
CLPTM1-209ENST00000588855 H3BSH0 61 aa16.14■□□□□ 0.18
CLPTM1-209ENST00000588855 MLNRO43193 412 aa16.14■□□□□ 0.18
CLPTM1-209ENST00000588855 RGS10O43665 173 aa16.14■□□□□ 0.18
CLPTM1-209ENST00000588855 NCR1O76036 304 aa16.14■□□□□ 0.18
CLPTM1-209ENST00000588855 LALBAP00709 142 aa16.14■□□□□ 0.18
CLPTM1-209ENST00000588855 MRPL28Q13084 256 aaKnown RBP16.14■□□□□ 0.18
CLPTM1-209ENST00000588855 TSTQ16762 297 aaKnown RBP16.14■□□□□ 0.18
CLPTM1-209ENST00000588855 RNLSQ5VYX0 342 aa16.14■□□□□ 0.18
CLPTM1-209ENST00000588855 OR10AD1Q8NGE0 317 aa16.14■□□□□ 0.18
CLPTM1-209ENST00000588855 CDCA4Q9BXL8 241 aa16.14■□□□□ 0.18
CLPTM1-209ENST00000588855 LRRC42Q9Y546 428 aa16.14■□□□□ 0.18
CLPTM1-209ENST00000588855 PRRC2AP48634 2157 aaKnown RBP16.14■□□□□ 0.17
CLPTM1-209ENST00000588855 H0YL77 283 aa16.14■□□□□ 0.17
CLPTM1-209ENST00000588855 EEF1B2P24534 225 aaKnown RBP16.14■□□□□ 0.17
CLPTM1-209ENST00000588855 DDOSTP39656 456 aa16.14■□□□□ 0.17
CLPTM1-209ENST00000588855 CCR9P51686 369 aa16.14■□□□□ 0.17
CLPTM1-209ENST00000588855 CCL8P80075 99 aa16.14■□□□□ 0.17
CLPTM1-209ENST00000588855 IRF3Q14653 427 aa16.14■□□□□ 0.17
CLPTM1-209ENST00000588855 RDH10Q8IZV5 341 aa16.14■□□□□ 0.17
CLPTM1-209ENST00000588855 NANOGP1Q8N7R0 232 aa16.14■□□□□ 0.17
CLPTM1-209ENST00000588855 OR2Z1Q8NG97 314 aa16.14■□□□□ 0.17
CLPTM1-209ENST00000588855 ELMOD3Q96FG2 381 aa16.14■□□□□ 0.17
CLPTM1-209ENST00000588855 CCDC90BQ9GZT6 254 aa16.14■□□□□ 0.17
CLPTM1-209ENST00000588855 TMEM100Q9NV29 134 aa16.14■□□□□ 0.17
CLPTM1-209ENST00000588855 BABAM2Q9NXR7 383 aa16.14■□□□□ 0.17
CLPTM1-209ENST00000588855 MRPL15Q9P015 296 aaKnown RBP16.14■□□□□ 0.17
CLPTM1-209ENST00000588855 ITGB1BP2Q9UKP3 347 aa16.14■□□□□ 0.17
CLPTM1-209ENST00000588855 ZDHHC8Q9ULC8 765 aa16.14■□□□□ 0.17
CLPTM1-209ENST00000588855 ERGIC3Q9Y282 383 aa16.14■□□□□ 0.17
CLPTM1-209ENST00000588855 A0A1B0GVI7 797 aa16.13■□□□□ 0.17
CLPTM1-209ENST00000588855 LOC107986453A0A1B0GWG9 222 aa16.13■□□□□ 0.17
CLPTM1-209ENST00000588855 OR4C45A6NMZ5 311 aa16.13■□□□□ 0.17
CLPTM1-209ENST00000588855 DHRS3O75911 302 aa16.13■□□□□ 0.17
CLPTM1-209ENST00000588855 HLA-DPB1P04440 258 aa16.13■□□□□ 0.17
CLPTM1-209ENST00000588855 ERCC1P07992 297 aaPredicted RBP16.13■□□□□ 0.17
CLPTM1-209ENST00000588855 ADH4P08319 380 aa16.13■□□□□ 0.17
CLPTM1-209ENST00000588855 UBCP0CG48 685 aaKnown RBP16.13■□□□□ 0.17
CLPTM1-209ENST00000588855 CCL1P22362 96 aa16.13■□□□□ 0.17
CLPTM1-209ENST00000588855 CA6P23280 308 aa16.13■□□□□ 0.17
CLPTM1-209ENST00000588855 TGM4P49221 684 aa16.13■□□□□ 0.17
CLPTM1-209ENST00000588855 EFNA4P52798 201 aa16.13■□□□□ 0.17
CLPTM1-209ENST00000588855 ART1P52961 327 aa16.13■□□□□ 0.17
CLPTM1-209ENST00000588855 WNT4P56705 351 aa16.13■□□□□ 0.17
CLPTM1-209ENST00000588855 GABARAPL2P60520 117 aa16.13■□□□□ 0.17
CLPTM1-209ENST00000588855 PCGF3Q3KNV8 242 aa16.13■□□□□ 0.17
CLPTM1-209ENST00000588855 PLPP7Q8NBV4 271 aa16.13■□□□□ 0.17
CLPTM1-209ENST00000588855 OR13G1Q8NGZ3 307 aa16.13■□□□□ 0.17
CLPTM1-209ENST00000588855 HAVCR2Q8TDQ0 301 aa16.13■□□□□ 0.17
CLPTM1-209ENST00000588855 NEU4Q8WWR8 484 aaPredicted RBP16.13■□□□□ 0.17
CLPTM1-209ENST00000588855 DVL3Q92997 716 aaPredicted RBP16.13■□□□□ 0.17
CLPTM1-209ENST00000588855 FOXC2Q99958 501 aa16.13■□□□□ 0.17
CLPTM1-209ENST00000588855 ADAT1Q9BUB4 502 aaKnown RBP16.13■□□□□ 0.17
CLPTM1-209ENST00000588855 MND1Q9BWT6 205 aa16.13■□□□□ 0.17
CLPTM1-209ENST00000588855 NKIRAS2Q9NYR9 191 aa16.13■□□□□ 0.17
CLPTM1-209ENST00000588855 SIRT4Q9Y6E7 314 aaPredicted RBP16.13■□□□□ 0.17
CLPTM1-209ENST00000588855 A0A1B0GWJ7 208 aa16.12■□□□□ 0.17
CLPTM1-209ENST00000588855 LOC390937A0A1W2PQ73 354 aa16.12■□□□□ 0.17
CLPTM1-209ENST00000588855 ANKRD30BLA7E2S9 258 aa16.12■□□□□ 0.17
CLPTM1-209ENST00000588855 SSX4O60224 188 aa16.12■□□□□ 0.17
CLPTM1-209ENST00000588855 F12P00748 615 aaPredicted RBP16.12■□□□□ 0.17
CLPTM1-209ENST00000588855 HPXP02790 462 aa16.12■□□□□ 0.17
CLPTM1-209ENST00000588855 MAP2K3P46734 347 aa16.12■□□□□ 0.17
CLPTM1-209ENST00000588855 CDK5R1Q15078 307 aa16.12■□□□□ 0.17
CLPTM1-209ENST00000588855 SPRNQ5BIV9 151 aa16.12■□□□□ 0.17
CLPTM1-209ENST00000588855 DOK3Q7L591 496 aa16.12■□□□□ 0.17
CLPTM1-209ENST00000588855 PRSS48Q7RTY5 328 aa16.12■□□□□ 0.17
CLPTM1-209ENST00000588855 CSNK2A3Q8NEV1 391 aa16.12■□□□□ 0.17
CLPTM1-209ENST00000588855 SEMA6DQ8NFY4 1073 aa16.12■□□□□ 0.17
CLPTM1-209ENST00000588855 OR14K1Q8NGZ2 314 aa16.12■□□□□ 0.17
CLPTM1-209ENST00000588855 DIRC2Q96SL1 478 aa16.12■□□□□ 0.17
CLPTM1-209ENST00000588855 PPP1R3EQ9H7J1 279 aa16.12■□□□□ 0.17
CLPTM1-209ENST00000588855 BARX1Q9HBU1 254 aaPredicted RBP16.12■□□□□ 0.17
CLPTM1-209ENST00000588855 TRIM36Q9NQ86 728 aa16.12■□□□□ 0.17
CLPTM1-209ENST00000588855 RHBDD3Q9Y3P4 386 aa16.12■□□□□ 0.17
CLPTM1-209ENST00000588855 V9GYS6 101 aa16.12■□□□□ 0.17
CLPTM1-209ENST00000588855 TANC2Q9HCD6 1990 aa16.12■□□□□ 0.17
CLPTM1-209ENST00000588855 TRBV2A0A0J9YWF9 115 aa16.11■□□□□ 0.17
CLPTM1-209ENST00000588855 TPD52L2O43399 206 aaKnown RBP16.11■□□□□ 0.17
CLPTM1-209ENST00000588855 SYT7O43581 403 aa16.11■□□□□ 0.17
CLPTM1-209ENST00000588855 MTRF1O75570 445 aaKnown RBP16.11■□□□□ 0.17
CLPTM1-209ENST00000588855 ZFPL1O95159 310 aa16.11■□□□□ 0.17
CLPTM1-209ENST00000588855 ATP6V1B1P15313 513 aa16.11■□□□□ 0.17
CLPTM1-209ENST00000588855 FAHP16930 419 aa16.11■□□□□ 0.17
CLPTM1-209ENST00000588855 CCDC58Q4VC31 144 aa16.11■□□□□ 0.17
CLPTM1-209ENST00000588855 FAM209AQ5JX71 171 aa16.11■□□□□ 0.17
CLPTM1-209ENST00000588855 Q5PR19 223 aa16.11■□□□□ 0.17
CLPTM1-209ENST00000588855 TMEM244Q5VVB8 128 aa16.11■□□□□ 0.17
CLPTM1-209ENST00000588855 RPL22L1Q6P5R6 122 aaKnown RBP16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms