RNA–Protein interactions for RNA: ENST00000588781.1

SPIDR-228, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 164 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-228ENST00000588781 SFTPDP35247 375 aa6.34□□□□□ -1.39
SPIDR-228ENST00000588781 OR3A2P47893 321 aa6.34□□□□□ -1.39
SPIDR-228ENST00000588781 P2RY4P51582 365 aa6.34□□□□□ -1.39
SPIDR-228ENST00000588781 PRKXP51817 358 aa6.34□□□□□ -1.39
SPIDR-228ENST00000588781 SUCLG1P53597 346 aaKnown RBP6.34□□□□□ -1.39
SPIDR-228ENST00000588781 CLDN17P56750 224 aa6.34□□□□□ -1.39
SPIDR-228ENST00000588781 H2BFSP57053 126 aa6.34□□□□□ -1.39
SPIDR-228ENST00000588781 RAC1P63000 192 aa6.34□□□□□ -1.39
SPIDR-228ENST00000588781 QRFPP83859 136 aa6.34□□□□□ -1.39
SPIDR-228ENST00000588781 FOXK1P85037 733 aa6.34□□□□□ -1.39
SPIDR-228ENST00000588781 SORDQ00796 357 aa6.34□□□□□ -1.39
SPIDR-228ENST00000588781 MC2RQ01718 297 aa6.34□□□□□ -1.39
SPIDR-228ENST00000588781 DHRS2Q13268 280 aa6.34□□□□□ -1.39
SPIDR-228ENST00000588781 ARFRP1Q13795 201 aa6.34□□□□□ -1.39
SPIDR-228ENST00000588781 SURF2Q15527 256 aaPredicted RBP6.34□□□□□ -1.39
SPIDR-228ENST00000588781 SGCAQ16586 387 aa6.34□□□□□ -1.39
SPIDR-228ENST00000588781 HLA-BQ31612 363 aa6.34□□□□□ -1.39
SPIDR-228ENST00000588781 GFOD2Q3B7J2 385 aa6.34□□□□□ -1.39
SPIDR-228ENST00000588781 CARD17Q5XLA6 110 aa6.34□□□□□ -1.39
SPIDR-228ENST00000588781 C11orf87Q6NUJ2 197 aa6.34□□□□□ -1.39
SPIDR-228ENST00000588781 C16orf47Q6ZP98 133 aaPredicted RBP6.34□□□□□ -1.39
SPIDR-228ENST00000588781 CFAP77Q6ZQR2 320 aa6.34□□□□□ -1.39
SPIDR-228ENST00000588781 FAM57BQ71RH2 274 aa6.34□□□□□ -1.39
SPIDR-228ENST00000588781 TMPRSS9Q7Z410 1059 aa6.34□□□□□ -1.39
SPIDR-228ENST00000588781 MAML2Q8IZL2 1156 aaPredicted RBP6.34□□□□□ -1.39
SPIDR-228ENST00000588781 EIF4E3Q8N5X7 224 aaKnown RBP6.34□□□□□ -1.39
SPIDR-228ENST00000588781 TMEM156Q8N614 296 aa6.34□□□□□ -1.39
SPIDR-228ENST00000588781 SLC38A9Q8NBW4 561 aa6.34□□□□□ -1.39
SPIDR-228ENST00000588781 OR8B12Q8NGG6 310 aa6.34□□□□□ -1.39
SPIDR-228ENST00000588781 OR4D10Q8NGI6 311 aa6.34□□□□□ -1.39
SPIDR-228ENST00000588781 OR52H1Q8NGJ2 320 aa6.34□□□□□ -1.39
SPIDR-228ENST00000588781 OR5M9Q8NGP3 310 aa6.34□□□□□ -1.39
SPIDR-228ENST00000588781 ADAT3Q96EY9 351 aaPredicted RBP6.34□□□□□ -1.39
SPIDR-228ENST00000588781 POM121Q96HA1 1249 aa6.34□□□□□ -1.39
SPIDR-228ENST00000588781 FAM71F1Q96KD3 344 aaPredicted RBP6.34□□□□□ -1.39
SPIDR-228ENST00000588781 TECTBQ96PL2 329 aa6.34□□□□□ -1.39
SPIDR-228ENST00000588781 SLC6A7Q99884 636 aa6.34□□□□□ -1.39
SPIDR-228ENST00000588781 VRK1Q99986 396 aaPredicted RBP6.34□□□□□ -1.39
SPIDR-228ENST00000588781 OCSTAMPQ9BR26 566 aa6.34□□□□□ -1.39
SPIDR-228ENST00000588781 ZPBPQ9BS86 351 aa6.34□□□□□ -1.39
SPIDR-228ENST00000588781 SELENOIQ9C0D9 397 aa6.34□□□□□ -1.39
SPIDR-228ENST00000588781 GPR84Q9NQS5 396 aa6.34□□□□□ -1.39
SPIDR-228ENST00000588781 HPF1Q9NWY4 346 aa6.34□□□□□ -1.39
SPIDR-228ENST00000588781 SDHAF2Q9NX18 166 aa6.34□□□□□ -1.39
SPIDR-228ENST00000588781 ASH2LQ9UBL3 628 aa6.34□□□□□ -1.39
SPIDR-228ENST00000588781 FBXL2Q9UKC9 423 aa6.34□□□□□ -1.39
SPIDR-228ENST00000588781 EDARQ9UNE0 448 aa6.34□□□□□ -1.39
SPIDR-228ENST00000588781 PTRH2Q9Y3E5 179 aaKnown RBP6.34□□□□□ -1.39
SPIDR-228ENST00000588781 RHBDD3Q9Y3P4 386 aa6.34□□□□□ -1.39
SPIDR-228ENST00000588781 CHCHD2Q9Y6H1 151 aaPredicted RBP6.34□□□□□ -1.39
SPIDR-228ENST00000588781 EXPH5Q8NEV8 1989 aa6.34□□□□□ -1.39
SPIDR-228ENST00000588781 EML5Q05BV3 1969 aa6.33□□□□□ -1.4
SPIDR-228ENST00000588781 IGKV1D-43A0A0B4J1Z2 117 aa6.33□□□□□ -1.4
SPIDR-228ENST00000588781 LY6G6EA0A0G2JKS1 128 aa6.33□□□□□ -1.4
SPIDR-228ENST00000588781 A0A1W2PNR3 127 aa6.33□□□□□ -1.4
SPIDR-228ENST00000588781 B4E171 279 aa6.33□□□□□ -1.4
SPIDR-228ENST00000588781 D6RAR5 112 aa6.33□□□□□ -1.4
SPIDR-228ENST00000588781 TEX46H3BTG2 121 aa6.33□□□□□ -1.4
SPIDR-228ENST00000588781 DHHO43323 396 aa6.33□□□□□ -1.4
SPIDR-228ENST00000588781 EFNA2O43921 213 aa6.33□□□□□ -1.4
SPIDR-228ENST00000588781 CRTAPO75718 401 aaPredicted RBP6.33□□□□□ -1.4
SPIDR-228ENST00000588781 DHRS3O75911 302 aa6.33□□□□□ -1.4
SPIDR-228ENST00000588781 TIAF1O95411 115 aa6.33□□□□□ -1.4
SPIDR-228ENST00000588781 SIX6O95475 246 aa6.33□□□□□ -1.4
SPIDR-228ENST00000588781 CFDP00746 253 aaPredicted RBP6.33□□□□□ -1.4
SPIDR-228ENST00000588781 PDGFBP01127 241 aaPredicted RBP6.33□□□□□ -1.4
SPIDR-228ENST00000588781 P04436 131 aa6.33□□□□□ -1.4
SPIDR-228ENST00000588781 CFIP05156 583 aa6.33□□□□□ -1.4
SPIDR-228ENST00000588781 SPTBP11277 2137 aa6.33□□□□□ -1.4
SPIDR-228ENST00000588781 MYF5P13349 255 aa6.33□□□□□ -1.4
SPIDR-228ENST00000588781 LIFP15018 202 aa6.33□□□□□ -1.4
SPIDR-228ENST00000588781 AMY2BP19961 511 aa6.33□□□□□ -1.4
SPIDR-228ENST00000588781 FPR2P25090 351 aa6.33□□□□□ -1.4
SPIDR-228ENST00000588781 SRD5A2P31213 254 aa6.33□□□□□ -1.4
SPIDR-228ENST00000588781 DLSTP36957 453 aa6.33□□□□□ -1.4
SPIDR-228ENST00000588781 TSPAN7P41732 249 aa6.33□□□□□ -1.4
SPIDR-228ENST00000588781 PCBD1P61457 104 aa6.33□□□□□ -1.4
SPIDR-228ENST00000588781 MRPS34P82930 218 aaKnown RBP6.33□□□□□ -1.4
SPIDR-228ENST00000588781 SCRN3Q0VDG4 424 aa6.33□□□□□ -1.4
SPIDR-228ENST00000588781 UNC119Q13432 240 aa6.33□□□□□ -1.4
SPIDR-228ENST00000588781 RAB35Q15286 201 aa6.33□□□□□ -1.4
SPIDR-228ENST00000588781 CNN3Q15417 329 aaKnown RBP6.33□□□□□ -1.4
SPIDR-228ENST00000588781 CSRP2Q16527 193 aa6.33□□□□□ -1.4
SPIDR-228ENST00000588781 ZNF528Q3MIS6 628 aa6.33□□□□□ -1.4
SPIDR-228ENST00000588781 CCDC157Q569K6 752 aa6.33□□□□□ -1.4
SPIDR-228ENST00000588781 TMEM128Q5BJH2 165 aa6.33□□□□□ -1.4
SPIDR-228ENST00000588781 PEAR1Q5VY43 1037 aaPredicted RBP6.33□□□□□ -1.4
SPIDR-228ENST00000588781 RAET1LQ5VY80 246 aa6.33□□□□□ -1.4
SPIDR-228ENST00000588781 EIF5AL1Q6IS14 154 aaKnown RBP6.33□□□□□ -1.4
SPIDR-228ENST00000588781 RGS7BPQ6MZT1 257 aaPredicted RBP6.33□□□□□ -1.4
SPIDR-228ENST00000588781 DRAM2Q6UX65 266 aa6.33□□□□□ -1.4
SPIDR-228ENST00000588781 Q6ZSR3 168 aa6.33□□□□□ -1.4
SPIDR-228ENST00000588781 OVCH2Q7RTZ1 564 aa6.33□□□□□ -1.4
SPIDR-228ENST00000588781 BIVMQ86UB2 503 aa6.33□□□□□ -1.4
SPIDR-228ENST00000588781 CD163Q86VB7 1156 aa6.33□□□□□ -1.4
SPIDR-228ENST00000588781 RPS19BP1Q86WX3 136 aaKnown RBP6.33□□□□□ -1.4
SPIDR-228ENST00000588781 LSRQ86X29 649 aaPredicted RBP6.33□□□□□ -1.4
SPIDR-228ENST00000588781 HOGA1Q86XE5 327 aa6.33□□□□□ -1.4
SPIDR-228ENST00000588781 WDSUB1Q8N9V3 476 aa6.33□□□□□ -1.4
SPIDR-228ENST00000588781 TMEM185AQ8NFB2 350 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms