RNA–Protein interactions for RNA: ENST00000588542.5

DDX39A-207, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 1,297 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-207ENST00000588542 TNFRSF1AP19438 455 aa17.08■□□□□ 0.32
DDX39A-207ENST00000588542 ACKR3P25106 362 aa17.08■□□□□ 0.32
DDX39A-207ENST00000588542 GPR6P46095 362 aaPredicted RBP17.08■□□□□ 0.32
DDX39A-207ENST00000588542 ACTC1P68032 377 aa17.08■□□□□ 0.32
DDX39A-207ENST00000588542 ACTA1P68133 377 aa17.08■□□□□ 0.32
DDX39A-207ENST00000588542 MAB21L1Q13394 359 aa17.08■□□□□ 0.32
DDX39A-207ENST00000588542 IL18R1Q13478 541 aa17.08■□□□□ 0.32
DDX39A-207ENST00000588542 HFEQ30201 348 aa17.08■□□□□ 0.32
DDX39A-207ENST00000588542 ZNF771Q7L3S4 317 aaPredicted RBP17.08■□□□□ 0.32
DDX39A-207ENST00000588542 ACBD7Q8N6N7 88 aa17.08■□□□□ 0.32
DDX39A-207ENST00000588542 SETD9Q8NE22 299 aa17.08■□□□□ 0.32
DDX39A-207ENST00000588542 CCL17Q92583 94 aa17.08■□□□□ 0.32
DDX39A-207ENST00000588542 RNF166Q96A37 237 aaPredicted RBP17.08■□□□□ 0.32
DDX39A-207ENST00000588542 SLC22A4Q9H015 551 aa17.08■□□□□ 0.32
DDX39A-207ENST00000588542 RPL36Q9Y3U8 105 aaKnown RBP17.08■□□□□ 0.32
DDX39A-207ENST00000588542 PCDHGB1Q9Y5G3 927 aa17.08■□□□□ 0.32
DDX39A-207ENST00000588542 DAPL1A0PJW8 107 aa17.07■□□□□ 0.32
DDX39A-207ENST00000588542 H0YJX3 145 aa17.07■□□□□ 0.32
DDX39A-207ENST00000588542 WNT9BO14905 357 aa17.07■□□□□ 0.32
DDX39A-207ENST00000588542 PPIHO43447 177 aaKnown RBP17.07■□□□□ 0.32
DDX39A-207ENST00000588542 GMDSO60547 372 aa17.07■□□□□ 0.32
DDX39A-207ENST00000588542 RPP14O95059 124 aaKnown RBP17.07■□□□□ 0.32
DDX39A-207ENST00000588542 IGHA1P01876 353 aa17.07■□□□□ 0.32
DDX39A-207ENST00000588542 CD200P41217 278 aa17.07■□□□□ 0.32
DDX39A-207ENST00000588542 AQP4P55087 323 aa17.07■□□□□ 0.32
DDX39A-207ENST00000588542 RAB40BQ12829 278 aa17.07■□□□□ 0.32
DDX39A-207ENST00000588542 RIPK1Q13546 671 aa17.07■□□□□ 0.32
DDX39A-207ENST00000588542 OR8G1Q15617 311 aa17.07■□□□□ 0.32
DDX39A-207ENST00000588542 CDONQ4KMG0 1287 aa17.07■□□□□ 0.32
DDX39A-207ENST00000588542 TP53I3Q53FA7 332 aa17.07■□□□□ 0.32
DDX39A-207ENST00000588542 OR52I1Q8NGK6 324 aa17.07■□□□□ 0.32
DDX39A-207ENST00000588542 OR51E1Q8TCB6 317 aa17.07■□□□□ 0.32
DDX39A-207ENST00000588542 RORBQ92753 470 aa17.07■□□□□ 0.32
DDX39A-207ENST00000588542 TFAP2CQ92754 450 aa17.07■□□□□ 0.32
DDX39A-207ENST00000588542 DVL3Q92997 716 aaPredicted RBP17.07■□□□□ 0.32
DDX39A-207ENST00000588542 ZNF649Q9BS31 505 aa17.07■□□□□ 0.32
DDX39A-207ENST00000588542 ADAT1Q9BUB4 502 aaKnown RBP17.07■□□□□ 0.32
DDX39A-207ENST00000588542 PPP1R3EQ9H7J1 279 aa17.07■□□□□ 0.32
DDX39A-207ENST00000588542 MOB1AQ9H8S9 216 aa17.07■□□□□ 0.32
DDX39A-207ENST00000588542 GCM1Q9NP62 436 aa17.07■□□□□ 0.32
DDX39A-207ENST00000588542 OR52A1Q9UKL2 312 aa17.07■□□□□ 0.32
DDX39A-207ENST00000588542 HSPE1-MOB4S4R3N1 261 aa17.07■□□□□ 0.32
DDX39A-207ENST00000588542 LRP5LA4QPB2 252 aa17.06■□□□□ 0.32
DDX39A-207ENST00000588542 FAM20BO75063 409 aa17.06■□□□□ 0.32
DDX39A-207ENST00000588542 SRP9P49458 86 aaKnown RBP17.06■□□□□ 0.32
DDX39A-207ENST00000588542 TMEM249Q2WGJ8 235 aa17.06■□□□□ 0.32
DDX39A-207ENST00000588542 LAIR2Q6ISS4 152 aa17.06■□□□□ 0.32
DDX39A-207ENST00000588542 CLEC9AQ6UXN8 241 aa17.06■□□□□ 0.32
DDX39A-207ENST00000588542 CATSPERDQ86XM0 798 aa17.06■□□□□ 0.32
DDX39A-207ENST00000588542 ELMOD2Q8IZ81 293 aa17.06■□□□□ 0.32
DDX39A-207ENST00000588542 CELF2-AS1Q8N7Q2 184 aa17.06■□□□□ 0.32
DDX39A-207ENST00000588542 FBLIM1Q8WUP2 373 aa17.06■□□□□ 0.32
DDX39A-207ENST00000588542 GPR84Q9NQS5 396 aa17.06■□□□□ 0.32
DDX39A-207ENST00000588542 ACOXLQ9NUZ1 547 aa17.06■□□□□ 0.32
DDX39A-207ENST00000588542 GNG8Q9UK08 70 aa17.06■□□□□ 0.32
DDX39A-207ENST00000588542 GTF2A1LQ9UNN4 478 aa17.06■□□□□ 0.32
DDX39A-207ENST00000588542 PPP1R3CQ9UQK1 317 aa17.06■□□□□ 0.32
DDX39A-207ENST00000588542 SLC22A13Q9Y226 551 aa17.06■□□□□ 0.32
DDX39A-207ENST00000588542 NOP16Q9Y3C1 178 aaKnown RBP17.06■□□□□ 0.32
DDX39A-207ENST00000588542 RHBDD3Q9Y3P4 386 aa17.06■□□□□ 0.32
DDX39A-207ENST00000588542 SNX5Q9Y5X3 404 aa17.06■□□□□ 0.32
DDX39A-207ENST00000588542 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.05■□□□□ 0.322e-7■■■■■ 34.7
DDX39A-207ENST00000588542 MALRD1Q5VYJ5 2156 aa17.05■□□□□ 0.32
DDX39A-207ENST00000588542 ANK3Q12955 4377 aaKnown RBP17.05■□□□□ 0.32
DDX39A-207ENST00000588542 IGHV3-64DA0A0J9YX35 117 aa17.05■□□□□ 0.32
DDX39A-207ENST00000588542 LOC100289279A0A1B0GTE1 492 aa17.05■□□□□ 0.32
DDX39A-207ENST00000588542 ANKRD30BLA7E2S9 258 aa17.05■□□□□ 0.32
DDX39A-207ENST00000588542 CLDN25C9JDP6 229 aa17.05■□□□□ 0.32
DDX39A-207ENST00000588542 ATP6V1G2O95670 118 aa17.05■□□□□ 0.32
DDX39A-207ENST00000588542 FADS2O95864 444 aaKnown RBP17.05■□□□□ 0.32
DDX39A-207ENST00000588542 GATA4P43694 442 aa17.05■□□□□ 0.32
DDX39A-207ENST00000588542 OR12D2P58182 307 aa17.05■□□□□ 0.32
DDX39A-207ENST00000588542 GALEQ14376 348 aa17.05■□□□□ 0.32
DDX39A-207ENST00000588542 KLHL22Q53GT1 634 aa17.05■□□□□ 0.32
DDX39A-207ENST00000588542 BCL2L15Q5TBC7 163 aa17.05■□□□□ 0.32
DDX39A-207ENST00000588542 LHFPL3Q86UP9 236 aa17.05■□□□□ 0.32
DDX39A-207ENST00000588542 C8orf59Q8N0T1 100 aaPredicted RBP17.05■□□□□ 0.32
DDX39A-207ENST00000588542 CSNK2A3Q8NEV1 391 aa17.05■□□□□ 0.32
DDX39A-207ENST00000588542 ZNF420Q8TAQ5 688 aaPredicted RBP17.05■□□□□ 0.32
DDX39A-207ENST00000588542 FGF20Q9NP95 211 aaPredicted RBP17.05■□□□□ 0.32
DDX39A-207ENST00000588542 TMEM106BQ9NUM4 274 aa17.05■□□□□ 0.32
DDX39A-207ENST00000588542 WIPI2Q9Y4P8 454 aa17.05■□□□□ 0.32
DDX39A-207ENST00000588542 A0A1B0GTI1 187 aa17.04■□□□□ 0.32
DDX39A-207ENST00000588542 PTBP3O95758 552 aaKnown RBP17.04■□□□□ 0.32
DDX39A-207ENST00000588542 HEXAP06865 529 aa17.04■□□□□ 0.32
DDX39A-207ENST00000588542 IL2RGP31785 369 aa17.04■□□□□ 0.32
DDX39A-207ENST00000588542 PSMB10P40306 273 aa17.04■□□□□ 0.32
DDX39A-207ENST00000588542 PMELP40967 661 aa17.04■□□□□ 0.32
DDX39A-207ENST00000588542 CHN2P52757 468 aa17.04■□□□□ 0.32
DDX39A-207ENST00000588542 MVKQ03426 396 aa17.04■□□□□ 0.32
DDX39A-207ENST00000588542 C6orf52Q5T4I8 152 aa17.04■□□□□ 0.32
DDX39A-207ENST00000588542 AVPI1Q5T686 147 aa17.04■□□□□ 0.32
DDX39A-207ENST00000588542 PRAMEF6Q5VXH4 476 aa17.04■□□□□ 0.32
DDX39A-207ENST00000588542 KRT74Q7RTS7 529 aa17.04■□□□□ 0.32
DDX39A-207ENST00000588542 KCTD20Q7Z5Y7 419 aa17.04■□□□□ 0.32
DDX39A-207ENST00000588542 MOGAT3Q86VF5 341 aa17.04■□□□□ 0.32
DDX39A-207ENST00000588542 KLBQ86Z14 1044 aa17.04■□□□□ 0.32
DDX39A-207ENST00000588542 PRSS35Q8N3Z0 413 aa17.04■□□□□ 0.32
DDX39A-207ENST00000588542 PLPP7Q8NBV4 271 aa17.04■□□□□ 0.32
DDX39A-207ENST00000588542 ERVK13-1Q9NX77 482 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms