RNA–Protein interactions for RNA: ENST00000588210.1

CCDC43-203, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC43, Length 2,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-203ENST00000588210 GLYATL3Q5SZD4 288 aa12.9□□□□□ -0.34
CCDC43-203ENST00000588210 C11orf88Q6PI97 169 aa12.9□□□□□ -0.34
CCDC43-203ENST00000588210 ALKAL2Q6UX46 152 aa12.9□□□□□ -0.34
CCDC43-203ENST00000588210 OR6S1Q8NH40 331 aa12.9□□□□□ -0.34
CCDC43-203ENST00000588210 PTX4Q96A99 478 aa12.9□□□□□ -0.34
CCDC43-203ENST00000588210 CHST6Q9GZX3 395 aa12.9□□□□□ -0.34
CCDC43-203ENST00000588210 PPA2Q9H2U2 334 aa12.9□□□□□ -0.34
CCDC43-203ENST00000588210 A6NIZ1 184 aa12.9□□□□□ -0.34
CCDC43-203ENST00000588210 RFPL4AA6NLU0 287 aa12.9□□□□□ -0.34
CCDC43-203ENST00000588210 RFPL4AL1F8VTS6 287 aa12.9□□□□□ -0.34
CCDC43-203ENST00000588210 ADAM10O14672 748 aa12.9□□□□□ -0.34
CCDC43-203ENST00000588210 CD74P04233 296 aa12.9□□□□□ -0.34
CCDC43-203ENST00000588210 OR4E1P0C645 316 aa12.9□□□□□ -0.34
CCDC43-203ENST00000588210 TDGF1P3P51864 188 aa12.9□□□□□ -0.34
CCDC43-203ENST00000588210 RAP1BP61224 184 aa12.9□□□□□ -0.34
CCDC43-203ENST00000588210 RAP1AP62834 184 aa12.9□□□□□ -0.34
CCDC43-203ENST00000588210 TAGLNQ01995 201 aaKnown RBP12.9□□□□□ -0.34
CCDC43-203ENST00000588210 C1orf100Q5SVJ3 147 aa12.9□□□□□ -0.34
CCDC43-203ENST00000588210 DNM1P34Q6PK57 102 aa12.9□□□□□ -0.34
CCDC43-203ENST00000588210 ZNF627Q7L945 461 aa12.9□□□□□ -0.34
CCDC43-203ENST00000588210 NKAIN3Q8N8D7 197 aa12.9□□□□□ -0.34
CCDC43-203ENST00000588210 ST6GALNAC3Q8NDV1 305 aa12.9□□□□□ -0.34
CCDC43-203ENST00000588210 SLC26A10Q8NG04 563 aa12.9□□□□□ -0.34
CCDC43-203ENST00000588210 OR13C3Q8NGS6 347 aa12.9□□□□□ -0.34
CCDC43-203ENST00000588210 OR6K3Q8NGY3 331 aa12.9□□□□□ -0.34
CCDC43-203ENST00000588210 DUSP19Q8WTR2 217 aa12.9□□□□□ -0.34
CCDC43-203ENST00000588210 JSRP1Q96MG2 331 aaPredicted RBP12.9□□□□□ -0.34
CCDC43-203ENST00000588210 NKX3-1Q99801 234 aaPredicted RBP12.9□□□□□ -0.34
CCDC43-203ENST00000588210 OR11A1Q9GZK7 315 aa12.9□□□□□ -0.34
CCDC43-203ENST00000588210 G6PC2Q9NQR9 355 aa12.9□□□□□ -0.34
CCDC43-203ENST00000588210 CGGBP1Q9UFW8 167 aaPredicted RBP12.9□□□□□ -0.34
CCDC43-203ENST00000588210 PFDN2Q9UHV9 154 aa12.9□□□□□ -0.34
CCDC43-203ENST00000588210 COA3Q9Y2R0 106 aaPredicted RBP12.9□□□□□ -0.34
CCDC43-203ENST00000588210 PHF3Q92576 2039 aaKnown RBP12.89□□□□□ -0.35
CCDC43-203ENST00000588210 SHANK1Q9Y566 2161 aa12.89□□□□□ -0.35
CCDC43-203ENST00000588210 LOC107986453A0A1B0GWG9 222 aa12.89□□□□□ -0.35
CCDC43-203ENST00000588210 BET1O15155 118 aa12.89□□□□□ -0.35
CCDC43-203ENST00000588210 ZNF735P0CB33 412 aa12.89□□□□□ -0.35
CCDC43-203ENST00000588210 PLA2G2AP14555 144 aa12.89□□□□□ -0.35
CCDC43-203ENST00000588210 MPGP29372 298 aa12.89□□□□□ -0.35
CCDC43-203ENST00000588210 PMPCAQ10713 525 aa12.89□□□□□ -0.35
CCDC43-203ENST00000588210 IGFBP7Q16270 282 aa12.89□□□□□ -0.35
CCDC43-203ENST00000588210 PCK2Q16822 640 aa12.89□□□□□ -0.35
CCDC43-203ENST00000588210 LY6G6FQ5SQ64 297 aa12.89□□□□□ -0.35
CCDC43-203ENST00000588210 LYPD6Q86Y78 171 aa12.89□□□□□ -0.35
CCDC43-203ENST00000588210 C12orf45Q8N5I9 185 aaPredicted RBP12.89□□□□□ -0.35
CCDC43-203ENST00000588210 OR51A2Q8NGJ7 313 aa12.89□□□□□ -0.35
CCDC43-203ENST00000588210 COQ8AQ8NI60 647 aa12.89□□□□□ -0.35
CCDC43-203ENST00000588210 ASB10Q8WXI3 467 aa12.89□□□□□ -0.35
CCDC43-203ENST00000588210 LINC00052Q96N35 136 aa12.89□□□□□ -0.35
CCDC43-203ENST00000588210 SDHAF3Q9NRP4 125 aa12.89□□□□□ -0.35
CCDC43-203ENST00000588210 B4GALT7Q9UBV7 327 aa12.89□□□□□ -0.35
CCDC43-203ENST00000588210 EMC9Q9Y3B6 208 aa12.89□□□□□ -0.35
CCDC43-203ENST00000588210 RHBDD3Q9Y3P4 386 aa12.89□□□□□ -0.35
CCDC43-203ENST00000588210 WIF1Q9Y5W5 379 aa12.89□□□□□ -0.35
CCDC43-203ENST00000588210 LRRC3CA6NJW4 275 aa12.89□□□□□ -0.35
CCDC43-203ENST00000588210 A8MXK9 166 aa12.89□□□□□ -0.35
CCDC43-203ENST00000588210 KRBOX1C9JBD0 128 aa12.89□□□□□ -0.35
CCDC43-203ENST00000588210 NPIPA5E9PKD4 350 aa12.89□□□□□ -0.35
CCDC43-203ENST00000588210 AMY2AP04746 511 aa12.89□□□□□ -0.35
CCDC43-203ENST00000588210 FCER2P06734 321 aa12.89□□□□□ -0.35
CCDC43-203ENST00000588210 HOXD4P09016 255 aaPredicted RBP12.89□□□□□ -0.35
CCDC43-203ENST00000588210 RAB6AP20340 208 aa12.89□□□□□ -0.35
CCDC43-203ENST00000588210 NUP62P37198 522 aaPredicted RBP12.89□□□□□ -0.35
CCDC43-203ENST00000588210 CAPZA1P52907 286 aa12.89□□□□□ -0.35
CCDC43-203ENST00000588210 SORDQ00796 357 aa12.89□□□□□ -0.35
CCDC43-203ENST00000588210 ZP4Q12836 540 aa12.89□□□□□ -0.35
CCDC43-203ENST00000588210 ZNF660Q6AZW8 331 aaPredicted RBP12.89□□□□□ -0.35
CCDC43-203ENST00000588210 ZNF704Q6ZNC4 412 aaPredicted RBP12.89□□□□□ -0.35
CCDC43-203ENST00000588210 SLC51BQ86UW2 128 aa12.89□□□□□ -0.35
CCDC43-203ENST00000588210 MISPQ8IVT2 679 aa12.89□□□□□ -0.35
CCDC43-203ENST00000588210 TMEM251Q8N6I4 163 aa12.89□□□□□ -0.35
CCDC43-203ENST00000588210 ST7LQ8TDW4 575 aa12.89□□□□□ -0.35
CCDC43-203ENST00000588210 TINAGL1Q9GZM7 467 aaPredicted RBP12.89□□□□□ -0.35
CCDC43-203ENST00000588210 ZDHHC11Q9H8X9 412 aa12.89□□□□□ -0.35
CCDC43-203ENST00000588210 OR52A1Q9UKL2 312 aa12.89□□□□□ -0.35
CCDC43-203ENST00000588210 NPIPA1Q9UND3 350 aa12.89□□□□□ -0.35
CCDC43-203ENST00000588210 TRAV14DV4A0A0A6YYC5 116 aa12.88□□□□□ -0.35
CCDC43-203ENST00000588210 NPIPB13A6NJU9 1138 aa12.88□□□□□ -0.35
CCDC43-203ENST00000588210 FAM166BA8MTA8 275 aa12.88□□□□□ -0.35
CCDC43-203ENST00000588210 NPIPB4C9JG80 1138 aa12.88□□□□□ -0.35
CCDC43-203ENST00000588210 MPZL1O95297 269 aa12.88□□□□□ -0.35
CCDC43-203ENST00000588210 CYB5AP00167 134 aa12.88□□□□□ -0.35
CCDC43-203ENST00000588210 CD8AP01732 235 aa12.88□□□□□ -0.35
CCDC43-203ENST00000588210 ZNF823P16415 610 aa12.88□□□□□ -0.35
CCDC43-203ENST00000588210 SRSF4Q08170 494 aaKnown RBP12.88□□□□□ -0.35
CCDC43-203ENST00000588210 ATPAF1Q5TC12 328 aaPredicted RBP12.88□□□□□ -0.35
CCDC43-203ENST00000588210 DEGS2Q6QHC5 323 aa12.88□□□□□ -0.35
CCDC43-203ENST00000588210 HSD17B13Q7Z5P4 300 aaPredicted RBP12.88□□□□□ -0.35
CCDC43-203ENST00000588210 OR5M9Q8NGP3 310 aa12.88□□□□□ -0.35
CCDC43-203ENST00000588210 TMEM234Q8WY98 164 aa12.88□□□□□ -0.35
CCDC43-203ENST00000588210 C1QTNF6Q9BXI9 259 aa12.88□□□□□ -0.35
CCDC43-203ENST00000588210 MFFQ9GZY8 342 aa12.88□□□□□ -0.35
CCDC43-203ENST00000588210 ZNF703Q9H7S9 590 aaPredicted RBP12.88□□□□□ -0.35
CCDC43-203ENST00000588210 ZNF462Q96JM2 2506 aa12.87□□□□□ -0.35
CCDC43-203ENST00000588210 A0A1B0GTI1 187 aa12.87□□□□□ -0.35
CCDC43-203ENST00000588210 C2orf72A6NCS6 295 aa12.87□□□□□ -0.35
CCDC43-203ENST00000588210 ZNF736B4DX44 427 aaPredicted RBP12.87□□□□□ -0.35
CCDC43-203ENST00000588210 M0QYG6 137 aa12.87□□□□□ -0.35
CCDC43-203ENST00000588210 FGF2P09038 288 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms