RNA–Protein interactions for RNA: ENST00000586119.1

LIG3-207, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-207ENST00000586119 DNAJC9Q8WXX5 260 aa9.61□□□□□ -0.87
LIG3-207ENST00000586119 CENPNQ96H22 339 aaPredicted RBP9.61□□□□□ -0.87
LIG3-207ENST00000586119 MAP6Q96JE9 813 aa9.61□□□□□ -0.87
LIG3-207ENST00000586119 WDFY2Q96P53 400 aa9.61□□□□□ -0.87
LIG3-207ENST00000586119 PKP2Q99959 881 aa9.61□□□□□ -0.87
LIG3-207ENST00000586119 RBM4BQ9BQ04 359 aaKnown RBP9.61□□□□□ -0.87
LIG3-207ENST00000586119 SIRPDQ9H106 197 aa9.61□□□□□ -0.87
LIG3-207ENST00000586119 SEMA6AQ9H2E6 1030 aa9.61□□□□□ -0.87
LIG3-207ENST00000586119 S100A14Q9HCY8 104 aa9.61□□□□□ -0.87
LIG3-207ENST00000586119 NOX4Q9NPH5 578 aa9.61□□□□□ -0.87
LIG3-207ENST00000586119 RPRD1BQ9NQG5 326 aaKnown RBP9.61□□□□□ -0.87
LIG3-207ENST00000586119 RNF7Q9UBF6 113 aa9.61□□□□□ -0.87
LIG3-207ENST00000586119 ATPIF1Q9UII2 106 aa9.61□□□□□ -0.87
LIG3-207ENST00000586119 RNF114Q9Y508 228 aa9.61□□□□□ -0.87
LIG3-207ENST00000586119 IGHV1-69DA0A0B4J2H0 117 aa9.6□□□□□ -0.87
LIG3-207ENST00000586119 TVP23AA6NH52 213 aa9.6□□□□□ -0.87
LIG3-207ENST00000586119 CD300LBA8K4G0 201 aa9.6□□□□□ -0.87
LIG3-207ENST00000586119 ANKRD65E5RJM6 399 aa9.6□□□□□ -0.87
LIG3-207ENST00000586119 H3BNX3 289 aa9.6□□□□□ -0.87
LIG3-207ENST00000586119 LGALS8O00214 317 aa9.6□□□□□ -0.87
LIG3-207ENST00000586119 P2RY10O00398 339 aa9.6□□□□□ -0.87
LIG3-207ENST00000586119 GPR137BO60478 399 aa9.6□□□□□ -0.87
LIG3-207ENST00000586119 TSPAN15O95858 294 aa9.6□□□□□ -0.87
LIG3-207ENST00000586119 IGHV1-69P01742 117 aa9.6□□□□□ -0.87
LIG3-207ENST00000586119 GRPP07492 148 aa9.6□□□□□ -0.87
LIG3-207ENST00000586119 CRABP1P29762 137 aa9.6□□□□□ -0.87
LIG3-207ENST00000586119 PYCR1P32322 319 aa9.6□□□□□ -0.87
LIG3-207ENST00000586119 OR8B8Q15620 311 aa9.6□□□□□ -0.87
LIG3-207ENST00000586119 OCLNQ16625 522 aa9.6□□□□□ -0.87
LIG3-207ENST00000586119 RFX4Q33E94 735 aa9.6□□□□□ -0.87
LIG3-207ENST00000586119 ZNF362Q5T0B9 420 aaPredicted RBP9.6□□□□□ -0.87
LIG3-207ENST00000586119 SLC35F1Q5T1Q4 408 aa9.6□□□□□ -0.87
LIG3-207ENST00000586119 ZNF770Q6IQ21 691 aaPredicted RBP9.6□□□□□ -0.87
LIG3-207ENST00000586119 SMARCD3Q6STE5 483 aa9.6□□□□□ -0.87
LIG3-207ENST00000586119 ZNF620Q6ZNG0 422 aa9.6□□□□□ -0.87
LIG3-207ENST00000586119 PGAP1Q75T13 922 aa9.6□□□□□ -0.87
LIG3-207ENST00000586119 ADCK1Q86TW2 530 aa9.6□□□□□ -0.87
LIG3-207ENST00000586119 PIP4P2Q8N4L2 257 aa9.6□□□□□ -0.87
LIG3-207ENST00000586119 SDR9C7Q8NEX9 313 aa9.6□□□□□ -0.87
LIG3-207ENST00000586119 GIPC3Q8TF64 312 aa9.6□□□□□ -0.87
LIG3-207ENST00000586119 SPRYD4Q8WW59 207 aaPredicted RBP9.6□□□□□ -0.87
LIG3-207ENST00000586119 SEH1LQ96EE3 360 aa9.6□□□□□ -0.87
LIG3-207ENST00000586119 FAM71F1Q96KD3 344 aaPredicted RBP9.6□□□□□ -0.87
LIG3-207ENST00000586119 ATF6BQ99941 703 aa9.6□□□□□ -0.87
LIG3-207ENST00000586119 OSBPL10Q9BXB5 764 aa9.6□□□□□ -0.87
LIG3-207ENST00000586119 DGCR6LQ9BY27 220 aa9.6□□□□□ -0.87
LIG3-207ENST00000586119 OR52D1Q9H346 318 aa9.6□□□□□ -0.87
LIG3-207ENST00000586119 PPP1R3EQ9H7J1 279 aa9.6□□□□□ -0.87
LIG3-207ENST00000586119 ACOXLQ9NUZ1 547 aa9.6□□□□□ -0.87
LIG3-207ENST00000586119 C1orf123Q9NWV4 160 aa9.6□□□□□ -0.87
LIG3-207ENST00000586119 VNN3Q9NY84 501 aa9.6□□□□□ -0.87
LIG3-207ENST00000586119 ERVK-18Q9QC07 812 aa9.6□□□□□ -0.87
LIG3-207ENST00000586119 DNAJB11Q9UBS4 358 aa9.6□□□□□ -0.87
LIG3-207ENST00000586119 CYB5R1Q9UHQ9 305 aa9.6□□□□□ -0.87
LIG3-207ENST00000586119 N6AMT1Q9Y5N5 214 aa9.6□□□□□ -0.87
LIG3-207ENST00000586119 U3KQV3 271 aa9.6□□□□□ -0.87
LIG3-207ENST00000586119 A0A0G2JK05 382 aa9.59□□□□□ -0.87
LIG3-207ENST00000586119 A0A1B0GUS0 222 aa9.59□□□□□ -0.87
LIG3-207ENST00000586119 A0A1W2PRD5 423 aa9.59□□□□□ -0.87
LIG3-207ENST00000586119 A0A1W2PRF3 423 aa9.59□□□□□ -0.87
LIG3-207ENST00000586119 A0A1W2PRM7 423 aa9.59□□□□□ -0.87
LIG3-207ENST00000586119 HLA-DQA2P01906 255 aa9.59□□□□□ -0.87
LIG3-207ENST00000586119 SLC2A1P11166 492 aa9.59□□□□□ -0.87
LIG3-207ENST00000586119 ANXA8P13928 327 aa9.59□□□□□ -0.87
LIG3-207ENST00000586119 IER3P46695 156 aa9.59□□□□□ -0.87
LIG3-207ENST00000586119 GSSP48637 474 aa9.59□□□□□ -0.87
LIG3-207ENST00000586119 PROK1P58294 105 aa9.59□□□□□ -0.87
LIG3-207ENST00000586119 TSPAN31Q12999 210 aa9.59□□□□□ -0.87
LIG3-207ENST00000586119 GLYATL3Q5SZD4 288 aa9.59□□□□□ -0.87
LIG3-207ENST00000586119 RPL13AP3Q6NVV1 102 aa9.59□□□□□ -0.87
LIG3-207ENST00000586119 PGBD2Q6P3X8 592 aa9.59□□□□□ -0.87
LIG3-207ENST00000586119 CD300LDQ6UXZ3 194 aa9.59□□□□□ -0.87
LIG3-207ENST00000586119 Q6ZSV7 163 aa9.59□□□□□ -0.87
LIG3-207ENST00000586119 BTN2A1Q7KYR7 527 aa9.59□□□□□ -0.87
LIG3-207ENST00000586119 ZBTB46Q86UZ6 589 aa9.59□□□□□ -0.87
LIG3-207ENST00000586119 FAM90A1Q86YD7 464 aa9.59□□□□□ -0.87
LIG3-207ENST00000586119 ZDHHC13Q8IUH4 622 aa9.59□□□□□ -0.87
LIG3-207ENST00000586119 C11orf53Q8IXP5 236 aa9.59□□□□□ -0.87
LIG3-207ENST00000586119 PQLC1Q8N2U9 271 aa9.59□□□□□ -0.87
LIG3-207ENST00000586119 LNX2Q8N448 690 aa9.59□□□□□ -0.87
LIG3-207ENST00000586119 GCSAMQ8N6F7 178 aa9.59□□□□□ -0.87
LIG3-207ENST00000586119 CELF2-AS1Q8N7Q2 184 aa9.59□□□□□ -0.87
LIG3-207ENST00000586119 OR10G2Q8NGC3 310 aa9.59□□□□□ -0.87
LIG3-207ENST00000586119 OR2AJ1Q8NGZ0 328 aa9.59□□□□□ -0.87
LIG3-207ENST00000586119 FAM110DQ8TAY7 271 aaPredicted RBP9.59□□□□□ -0.87
LIG3-207ENST00000586119 GATAD2BQ8WXI9 593 aa9.59□□□□□ -0.87
LIG3-207ENST00000586119 LRTOMTQ8WZ04 291 aa9.59□□□□□ -0.87
LIG3-207ENST00000586119 ERGIC1Q969X5 290 aa9.59□□□□□ -0.87
LIG3-207ENST00000586119 OOEPA6NGQ2 149 aa9.58□□□□□ -0.88
LIG3-207ENST00000586119 GGT3PA6NGU5 568 aa9.58□□□□□ -0.88
LIG3-207ENST00000586119 G3V2T6 193 aa9.58□□□□□ -0.88
LIG3-207ENST00000586119 M0QZ24 198 aa9.58□□□□□ -0.88
LIG3-207ENST00000586119 M0R135 149 aa9.58□□□□□ -0.88
LIG3-207ENST00000586119 DVL1O14640 695 aa9.58□□□□□ -0.88
LIG3-207ENST00000586119 CLPXO76031 633 aa9.58□□□□□ -0.88
LIG3-207ENST00000586119 RENP00797 406 aa9.58□□□□□ -0.88
LIG3-207ENST00000586119 TFF1P04155 84 aa9.58□□□□□ -0.88
LIG3-207ENST00000586119 NPY4RP50391 375 aa9.58□□□□□ -0.88
LIG3-207ENST00000586119 TPTEP56180 551 aa9.58□□□□□ -0.88
LIG3-207ENST00000586119 BPIFB3P59826 476 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms