RNA–Protein interactions for RNA: ENST00000585740.5

LIG3-204, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-204ENST00000585740 MAGEA5P43359 124 aa9.88□□□□□ -0.83
LIG3-204ENST00000585740 MECP2P51608 486 aaKnown RBP9.88□□□□□ -0.83
LIG3-204ENST00000585740 PPIAP62937 165 aaKnown RBP9.88□□□□□ -0.83
LIG3-204ENST00000585740 ARG2P78540 354 aa9.88□□□□□ -0.83
LIG3-204ENST00000585740 MRPS15P82914 257 aaKnown RBP9.88□□□□□ -0.83
LIG3-204ENST00000585740 SLC10A1Q14973 349 aa9.88□□□□□ -0.83
LIG3-204ENST00000585740 RNPS1Q15287 305 aaKnown RBP9.88□□□□□ -0.83
LIG3-204ENST00000585740 GSG1Q2KHT4 349 aa9.88□□□□□ -0.83
LIG3-204ENST00000585740 CEACAM16Q2WEN9 425 aa9.88□□□□□ -0.83
LIG3-204ENST00000585740 AWAT2Q6E213 333 aa9.88□□□□□ -0.83
LIG3-204ENST00000585740 SFRP4Q6FHJ7 346 aaPredicted RBP9.88□□□□□ -0.83
LIG3-204ENST00000585740 CHMP1BQ7LBR1 199 aa9.88□□□□□ -0.83
LIG3-204ENST00000585740 SLC16A14Q7RTX9 510 aa9.88□□□□□ -0.83
LIG3-204ENST00000585740 OR5AS1Q8N127 324 aa9.88□□□□□ -0.83
LIG3-204ENST00000585740 GCDHQ92947 438 aaPredicted RBP9.88□□□□□ -0.83
LIG3-204ENST00000585740 ITFG2Q969R8 447 aa9.88□□□□□ -0.83
LIG3-204ENST00000585740 FBXO17Q96EF6 278 aa9.88□□□□□ -0.83
LIG3-204ENST00000585740 CPNE2Q96FN4 548 aaPredicted RBP9.88□□□□□ -0.83
LIG3-204ENST00000585740 MED30Q96HR3 178 aa9.88□□□□□ -0.83
LIG3-204ENST00000585740 ZNF845Q96IR2 970 aaPredicted RBP9.88□□□□□ -0.83
LIG3-204ENST00000585740 HES7Q9BYE0 225 aa9.88□□□□□ -0.83
LIG3-204ENST00000585740 PRRG4Q9BZD6 226 aa9.88□□□□□ -0.83
LIG3-204ENST00000585740 SLC6A15Q9H2J7 730 aa9.88□□□□□ -0.83
LIG3-204ENST00000585740 EXO5Q9H790 373 aa9.88□□□□□ -0.83
LIG3-204ENST00000585740 GPN1Q9HCN4 374 aaPredicted RBP9.88□□□□□ -0.83
LIG3-204ENST00000585740 MCUBQ9NWR8 336 aa9.88□□□□□ -0.83
LIG3-204ENST00000585740 PTTG3PQ9NZH4 202 aa9.88□□□□□ -0.83
LIG3-204ENST00000585740 MRPL15Q9P015 296 aaKnown RBP9.88□□□□□ -0.83
LIG3-204ENST00000585740 ZNF319Q9P2F9 582 aa9.88□□□□□ -0.83
LIG3-204ENST00000585740 POU2F3Q9UKI9 436 aa9.88□□□□□ -0.83
LIG3-204ENST00000585740 MRPS28Q9Y2Q9 187 aaKnown RBP9.88□□□□□ -0.83
LIG3-204ENST00000585740 PTPRBP23467 1997 aa9.87□□□□□ -0.83
LIG3-204ENST00000585740 A8MV72 311 aaPredicted RBP9.87□□□□□ -0.83
LIG3-204ENST00000585740 RPL36A-HNRNPH2H7BZ11 118 aa9.87□□□□□ -0.83
LIG3-204ENST00000585740 NDUFB6O95139 128 aa9.87□□□□□ -0.83
LIG3-204ENST00000585740 MELTFP08582 738 aa9.87□□□□□ -0.83
LIG3-204ENST00000585740 GTF2F2P13984 249 aa9.87□□□□□ -0.83
LIG3-204ENST00000585740 ABOP16442 354 aa9.87□□□□□ -0.83
LIG3-204ENST00000585740 QRFPP83859 136 aa9.87□□□□□ -0.83
LIG3-204ENST00000585740 RBMS2Q15434 407 aaKnown RBP9.87□□□□□ -0.83
LIG3-204ENST00000585740 KRTAP27-1Q3LI81 207 aa9.87□□□□□ -0.83
LIG3-204ENST00000585740 ZNF766Q5HY98 468 aa9.87□□□□□ -0.83
LIG3-204ENST00000585740 ZNF782Q6ZMW2 699 aaPredicted RBP9.87□□□□□ -0.83
LIG3-204ENST00000585740 ANGPTL5Q86XS5 388 aa9.87□□□□□ -0.83
LIG3-204ENST00000585740 MCEMP1Q8IX19 187 aa9.87□□□□□ -0.83
LIG3-204ENST00000585740 ZNF101Q8IZC7 436 aa9.87□□□□□ -0.83
LIG3-204ENST00000585740 KCNG3Q8TAE7 436 aa9.87□□□□□ -0.83
LIG3-204ENST00000585740 ABHD3Q8WU67 409 aa9.87□□□□□ -0.83
LIG3-204ENST00000585740 GIMAP1Q8WWP7 306 aa9.87□□□□□ -0.83
LIG3-204ENST00000585740 DACT3Q96B18 629 aaPredicted RBP9.87□□□□□ -0.83
LIG3-204ENST00000585740 ZNF775Q96BV0 537 aaPredicted RBP9.87□□□□□ -0.83
LIG3-204ENST00000585740 DMRTB1Q96MA1 342 aa9.87□□□□□ -0.83
LIG3-204ENST00000585740 ALKBH3Q96Q83 286 aaPredicted RBP9.87□□□□□ -0.83
LIG3-204ENST00000585740 KCNK15Q9H427 330 aa9.87□□□□□ -0.83
LIG3-204ENST00000585740 RGCCQ9H4X1 137 aa9.87□□□□□ -0.83
LIG3-204ENST00000585740 BCO1Q9HAY6 547 aa9.87□□□□□ -0.83
LIG3-204ENST00000585740 NOX3Q9HBY0 568 aa9.87□□□□□ -0.83
LIG3-204ENST00000585740 ASCL3Q9NQ33 180 aa9.87□□□□□ -0.83
LIG3-204ENST00000585740 UPB1Q9UBR1 384 aa9.87□□□□□ -0.83
LIG3-204ENST00000585740 HELZ2Q9BYK8 2649 aaKnown RBP9.87□□□□□ -0.83
LIG3-204ENST00000585740 CELSR3Q9NYQ7 3312 aa9.87□□□□□ -0.83
LIG3-204ENST00000585740 FAM172BPA6NC97 362 aa9.86□□□□□ -0.83
LIG3-204ENST00000585740 SNRPGP15A8MWD9 76 aa9.86□□□□□ -0.83
LIG3-204ENST00000585740 ZNF587BE7ETH6 402 aa9.86□□□□□ -0.83
LIG3-204ENST00000585740 HAX1O00165 279 aa9.86□□□□□ -0.83
LIG3-204ENST00000585740 ICMTO60725 284 aa9.86□□□□□ -0.83
LIG3-204ENST00000585740 CYB5AP00167 134 aa9.86□□□□□ -0.83
LIG3-204ENST00000585740 ITGB2P05107 769 aa9.86□□□□□ -0.83
LIG3-204ENST00000585740 VSIG8P0DPA2 414 aa9.86□□□□□ -0.83
LIG3-204ENST00000585740 COX5BP10606 129 aa9.86□□□□□ -0.83
LIG3-204ENST00000585740 PTHLHP12272 177 aa9.86□□□□□ -0.83
LIG3-204ENST00000585740 ANXA3P12429 323 aa9.86□□□□□ -0.83
LIG3-204ENST00000585740 ZNF32P17041 273 aa9.86□□□□□ -0.83
LIG3-204ENST00000585740 NTF4P34130 210 aa9.86□□□□□ -0.83
LIG3-204ENST00000585740 ALDH3B1P43353 468 aa9.86□□□□□ -0.83
LIG3-204ENST00000585740 HTR5AP47898 357 aa9.86□□□□□ -0.83
LIG3-204ENST00000585740 SRYQ05066 204 aa9.86□□□□□ -0.83
LIG3-204ENST00000585740 MEF2DQ14814 521 aa9.86□□□□□ -0.83
LIG3-204ENST00000585740 ARL6IP1Q15041 203 aa9.86□□□□□ -0.83
LIG3-204ENST00000585740 ZMYND11Q15326 602 aa9.86□□□□□ -0.83
LIG3-204ENST00000585740 FCN2Q15485 313 aa9.86□□□□□ -0.83
LIG3-204ENST00000585740 RSPO1Q2MKA7 263 aaPredicted RBP9.86□□□□□ -0.83
LIG3-204ENST00000585740 GFOD2Q3B7J2 385 aa9.86□□□□□ -0.83
LIG3-204ENST00000585740 LINC00303Q3SY05 128 aa9.86□□□□□ -0.83
LIG3-204ENST00000585740 ZNF260Q3ZCT1 412 aa9.86□□□□□ -0.83
LIG3-204ENST00000585740 STEAP1BQ6NZ63 245 aa9.86□□□□□ -0.83
LIG3-204ENST00000585740 GLIPR1L1Q6UWM5 242 aa9.86□□□□□ -0.83
LIG3-204ENST00000585740 DPPA2Q7Z7J5 298 aa9.86□□□□□ -0.83
LIG3-204ENST00000585740 BIVMQ86UB2 503 aa9.86□□□□□ -0.83
LIG3-204ENST00000585740 SEMA6DQ8NFY4 1073 aa9.86□□□□□ -0.83
LIG3-204ENST00000585740 OR4C16Q8NGL9 310 aa9.86□□□□□ -0.83
LIG3-204ENST00000585740 SSC4DQ8WTU2 575 aa9.86□□□□□ -0.83
LIG3-204ENST00000585740 AQP3Q92482 292 aa9.86□□□□□ -0.83
LIG3-204ENST00000585740 SEH1LQ96EE3 360 aa9.86□□□□□ -0.83
LIG3-204ENST00000585740 ZNF837Q96EG3 531 aaPredicted RBP9.86□□□□□ -0.83
LIG3-204ENST00000585740 LYZL4Q96KX0 146 aa9.86□□□□□ -0.83
LIG3-204ENST00000585740 FYTTD1Q96QD9 318 aaKnown RBP9.86□□□□□ -0.83
LIG3-204ENST00000585740 GPER1Q99527 375 aa9.86□□□□□ -0.83
LIG3-204ENST00000585740 URM1Q9BTM9 101 aaKnown RBP9.86□□□□□ -0.83
LIG3-204ENST00000585740 OR2H1Q9GZK4 316 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms