RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 ICAM2P13598 275 aa12.56□□□□□ -0.4
CDK5RAP3-237ENST00000585163 ZNF17P17021 662 aa12.56□□□□□ -0.4
CDK5RAP3-237ENST00000585163 P2RY4P51582 365 aa12.56□□□□□ -0.4
CDK5RAP3-237ENST00000585163 MFAP5Q13361 173 aa12.56□□□□□ -0.4
CDK5RAP3-237ENST00000585163 PLPPR5Q32ZL2 321 aa12.56□□□□□ -0.4
CDK5RAP3-237ENST00000585163 FAM74A3Q4VXF1 159 aa12.56□□□□□ -0.4
CDK5RAP3-237ENST00000585163 PDSS1Q5T2R2 415 aa12.56□□□□□ -0.4
CDK5RAP3-237ENST00000585163 WDR74Q6RFH5 385 aaPredicted RBP12.56□□□□□ -0.4
CDK5RAP3-237ENST00000585163 OR8B12Q8NGG6 310 aa12.56□□□□□ -0.4
CDK5RAP3-237ENST00000585163 TMEM41AQ96HV5 264 aa12.56□□□□□ -0.4
CDK5RAP3-237ENST00000585163 RNF126Q9BV68 326 aa12.56□□□□□ -0.4
CDK5RAP3-237ENST00000585163 ZNF416Q9BWM5 594 aa12.56□□□□□ -0.4
CDK5RAP3-237ENST00000585163 PCED1AQ9H1Q7 454 aa12.56□□□□□ -0.4
CDK5RAP3-237ENST00000585163 ZNF768Q9H5H4 540 aaKnown RBP12.56□□□□□ -0.4
CDK5RAP3-237ENST00000585163 C5orf66Q9H5L9 145 aa12.56□□□□□ -0.4
CDK5RAP3-237ENST00000585163 PPP4R1LQ9P1A2 415 aa12.56□□□□□ -0.4
CDK5RAP3-237ENST00000585163 SRPK3Q9UPE1 567 aa12.56□□□□□ -0.4
CDK5RAP3-237ENST00000585163 ADAMTS20P59510 1910 aa12.56□□□□□ -0.4
CDK5RAP3-237ENST00000585163 ABCD4O14678 606 aa12.55□□□□□ -0.4
CDK5RAP3-237ENST00000585163 ATG12O94817 140 aa12.55□□□□□ -0.4
CDK5RAP3-237ENST00000585163 PLATP00750 562 aa12.55□□□□□ -0.4
CDK5RAP3-237ENST00000585163 MYF5P13349 255 aa12.55□□□□□ -0.4
CDK5RAP3-237ENST00000585163 MSX1P28360 303 aa12.55□□□□□ -0.4
CDK5RAP3-237ENST00000585163 OR3A4PP47883 348 aa12.55□□□□□ -0.4
CDK5RAP3-237ENST00000585163 TMEM50BP56557 158 aa12.55□□□□□ -0.4
CDK5RAP3-237ENST00000585163 PNLIPRP3Q17RR3 467 aa12.55□□□□□ -0.4
CDK5RAP3-237ENST00000585163 ACTBL2Q562R1 376 aa12.55□□□□□ -0.4
CDK5RAP3-237ENST00000585163 ADPRHL1Q8NDY3 354 aa12.55□□□□□ -0.4
CDK5RAP3-237ENST00000585163 SLC30A7Q8NEW0 376 aa12.55□□□□□ -0.4
CDK5RAP3-237ENST00000585163 POC1BQ8TC44 478 aa12.55□□□□□ -0.4
CDK5RAP3-237ENST00000585163 DCUN1D4Q92564 292 aa12.55□□□□□ -0.4
CDK5RAP3-237ENST00000585163 SLC6A15Q9H2J7 730 aa12.55□□□□□ -0.4
CDK5RAP3-237ENST00000585163 GPR84Q9NQS5 396 aa12.55□□□□□ -0.4
CDK5RAP3-237ENST00000585163 SDHAF3Q9NRP4 125 aa12.55□□□□□ -0.4
CDK5RAP3-237ENST00000585163 ZNF319Q9P2F9 582 aa12.55□□□□□ -0.4
CDK5RAP3-237ENST00000585163 TRAF3IP2O43734 574 aaPredicted RBP12.55□□□□□ -0.4
CDK5RAP3-237ENST00000585163 HEXBP07686 556 aa12.55□□□□□ -0.4
CDK5RAP3-237ENST00000585163 SLC2A1P11166 492 aa12.55□□□□□ -0.4
CDK5RAP3-237ENST00000585163 TPT1P13693 172 aaKnown RBP12.55□□□□□ -0.4
CDK5RAP3-237ENST00000585163 CDAP32320 146 aa12.55□□□□□ -0.4
CDK5RAP3-237ENST00000585163 ZNF121P58317 390 aaPredicted RBP12.55□□□□□ -0.4
CDK5RAP3-237ENST00000585163 GABREP78334 506 aa12.55□□□□□ -0.4
CDK5RAP3-237ENST00000585163 NAAAQ02083 359 aa12.55□□□□□ -0.4
CDK5RAP3-237ENST00000585163 COMMD2Q86X83 199 aa12.55□□□□□ -0.4
CDK5RAP3-237ENST00000585163 BOLLQ8N9W6 283 aaKnown RBP12.55□□□□□ -0.4
CDK5RAP3-237ENST00000585163 SLC38A9Q8NBW4 561 aa12.55□□□□□ -0.4
CDK5RAP3-237ENST00000585163 SVIPQ8NHG7 77 aa12.55□□□□□ -0.4
CDK5RAP3-237ENST00000585163 TMEM230Q96A57 120 aa12.55□□□□□ -0.4
CDK5RAP3-237ENST00000585163 CDC6Q99741 560 aa12.55□□□□□ -0.4
CDK5RAP3-237ENST00000585163 TMEM59Q9BXS4 323 aa12.55□□□□□ -0.4
CDK5RAP3-237ENST00000585163 IFT22Q9H7X7 185 aa12.55□□□□□ -0.4
CDK5RAP3-237ENST00000585163 TMEM100Q9NV29 134 aa12.55□□□□□ -0.4
CDK5RAP3-237ENST00000585163 ASF1BQ9NVP2 202 aa12.55□□□□□ -0.4
CDK5RAP3-237ENST00000585163 ASH2LQ9UBL3 628 aa12.55□□□□□ -0.4
CDK5RAP3-237ENST00000585163 IGLV3-32A0A0A0MS00 114 aa12.54□□□□□ -0.4
CDK5RAP3-237ENST00000585163 TRBV11-1A0A0K0K1C0 115 aa12.54□□□□□ -0.4
CDK5RAP3-237ENST00000585163 CCL1P22362 96 aa12.54□□□□□ -0.4
CDK5RAP3-237ENST00000585163 ANOS1P23352 680 aa12.54□□□□□ -0.4
CDK5RAP3-237ENST00000585163 PABPC1L2AQ5JQF8 200 aa12.54□□□□□ -0.4
CDK5RAP3-237ENST00000585163 SLC25A47Q6Q0C1 308 aa12.54□□□□□ -0.4
CDK5RAP3-237ENST00000585163 ABCA7Q8IZY2 2146 aa12.54□□□□□ -0.4
CDK5RAP3-237ENST00000585163 GTPBP8Q8N3Z3 284 aaPredicted RBP12.54□□□□□ -0.4
CDK5RAP3-237ENST00000585163 SLC25A45Q8N413 288 aa12.54□□□□□ -0.4
CDK5RAP3-237ENST00000585163 RRNAD1Q96FB5 475 aaKnown RBP12.54□□□□□ -0.4
CDK5RAP3-237ENST00000585163 OCSTAMPQ9BR26 566 aa12.54□□□□□ -0.4
CDK5RAP3-237ENST00000585163 BANF2Q9H503 90 aa12.54□□□□□ -0.4
CDK5RAP3-237ENST00000585163 PNRC2Q9NPJ4 139 aaKnown RBP12.54□□□□□ -0.4
CDK5RAP3-237ENST00000585163 PCDHB16Q9NRJ7 776 aa12.54□□□□□ -0.4
CDK5RAP3-237ENST00000585163 TMEM218A2RU14 115 aa12.54□□□□□ -0.4
CDK5RAP3-237ENST00000585163 H0YIZ8 118 aa12.54□□□□□ -0.4
CDK5RAP3-237ENST00000585163 RER1O15258 196 aa12.54□□□□□ -0.4
CDK5RAP3-237ENST00000585163 RAD51DO75771 328 aa12.54□□□□□ -0.4
CDK5RAP3-237ENST00000585163 SRFP11831 508 aa12.54□□□□□ -0.4
CDK5RAP3-237ENST00000585163 PTGDSP41222 190 aa12.54□□□□□ -0.4
CDK5RAP3-237ENST00000585163 NPY4RP50391 375 aa12.54□□□□□ -0.4
CDK5RAP3-237ENST00000585163 FAM189A2Q15884 450 aa12.54□□□□□ -0.4
CDK5RAP3-237ENST00000585163 BAP18Q8IXM2 172 aa12.54□□□□□ -0.4
CDK5RAP3-237ENST00000585163 ARMC10Q8N2F6 343 aa12.54□□□□□ -0.4
CDK5RAP3-237ENST00000585163 ZSCAN4Q8NAM6 433 aaPredicted RBP12.54□□□□□ -0.4
CDK5RAP3-237ENST00000585163 OR5T2Q8NGG2 359 aa12.54□□□□□ -0.4
CDK5RAP3-237ENST00000585163 SSC4DQ8WTU2 575 aa12.54□□□□□ -0.4
CDK5RAP3-237ENST00000585163 RAB18Q9NP72 206 aa12.54□□□□□ -0.4
CDK5RAP3-237ENST00000585163 CYTL1Q9NRR1 136 aa12.54□□□□□ -0.4
CDK5RAP3-237ENST00000585163 RALGAPA1Q6GYQ0 2036 aa12.54□□□□□ -0.4
CDK5RAP3-237ENST00000585163 A0A0B4J2A0 478 aa12.53□□□□□ -0.4
CDK5RAP3-237ENST00000585163 A0A1W2PP11 408 aa12.53□□□□□ -0.4
CDK5RAP3-237ENST00000585163 PCP4L1A6NKN8 68 aa12.53□□□□□ -0.4
CDK5RAP3-237ENST00000585163 MFNGO00587 321 aa12.53□□□□□ -0.4
CDK5RAP3-237ENST00000585163 SFT2D2O95562 160 aa12.53□□□□□ -0.4
CDK5RAP3-237ENST00000585163 HCKP08631 526 aa12.53□□□□□ -0.4
CDK5RAP3-237ENST00000585163 SGCAQ16586 387 aa12.53□□□□□ -0.4
CDK5RAP3-237ENST00000585163 CLEC18BQ6UXF7 455 aa12.53□□□□□ -0.4
CDK5RAP3-237ENST00000585163 TMPPEQ6ZT21 453 aa12.53□□□□□ -0.4
CDK5RAP3-237ENST00000585163 RABEPKQ7Z6M1 372 aa12.53□□□□□ -0.4
CDK5RAP3-237ENST00000585163 PEG10Q86TG7 708 aaKnown RBP12.53□□□□□ -0.4
CDK5RAP3-237ENST00000585163 OR56B1Q8NGI3 324 aa12.53□□□□□ -0.4
CDK5RAP3-237ENST00000585163 OR6X1Q8NH79 312 aa12.53□□□□□ -0.4
CDK5RAP3-237ENST00000585163 FAM71F1Q96KD3 344 aaPredicted RBP12.53□□□□□ -0.4
CDK5RAP3-237ENST00000585163 WDR77Q9BQA1 342 aaPredicted RBP12.53□□□□□ -0.4
CDK5RAP3-237ENST00000585163 SHPKQ9UHJ6 478 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms