RNA–Protein interactions for RNA: ENST00000584760.1

SREBF1-223, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 2

Gene SREBF1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-223	ENST00000584760	BCDIN3D	Q7Z5W3	292 aa	Known RBP	11.15	□□□□□ -0.62
SREBF1-223	ENST00000584760	KLB	Q86Z14	1044 aa		11.15	□□□□□ -0.62
SREBF1-223	ENST00000584760	C1orf87	Q8N0U7	546 aa		11.15	□□□□□ -0.62
SREBF1-223	ENST00000584760	C3orf56	Q8N813	242 aa		11.15	□□□□□ -0.62
SREBF1-223	ENST00000584760	FAHD2A	Q96GK7	314 aa		11.15	□□□□□ -0.62
SREBF1-223	ENST00000584760	GABARAPL3	Q9BY60	117 aa		11.15	□□□□□ -0.62
SREBF1-223	ENST00000584760	OR10A2	Q9H208	303 aa		11.15	□□□□□ -0.62
SREBF1-223	ENST00000584760	SP140L	Q9H930	580 aa		11.15	□□□□□ -0.62
SREBF1-223	ENST00000584760	UFSP2	Q9NUQ7	469 aa		11.15	□□□□□ -0.62
SREBF1-223	ENST00000584760	ENOPH1	Q9UHY7	261 aa		11.15	□□□□□ -0.62
SREBF1-223	ENST00000584760	LAMP5	Q9UJQ1	280 aa		11.15	□□□□□ -0.62
SREBF1-223	ENST00000584760	PCDHB10	Q9UN67	800 aa		11.15	□□□□□ -0.62
SREBF1-223	ENST00000584760	POLR3K	Q9Y2Y1	108 aa	Predicted RBP	11.15	□□□□□ -0.62
SREBF1-223	ENST00000584760	LOC105371242	A0A075B767	164 aa		11.14	□□□□□ -0.63
SREBF1-223	ENST00000584760	CFL1	P23528	166 aa	Known RBP	11.14	□□□□□ -0.63
SREBF1-223	ENST00000584760	ACTG1	P63261	375 aa		11.14	□□□□□ -0.63
SREBF1-223	ENST00000584760	KPNB1	Q14974	876 aa	Known RBP	11.14	□□□□□ -0.63
SREBF1-223	ENST00000584760	OR8B8	Q15620	311 aa		11.14	□□□□□ -0.63
SREBF1-223	ENST00000584760	GFOD2	Q3B7J2	385 aa		11.14	□□□□□ -0.63
SREBF1-223	ENST00000584760	FAM201A	Q5SY85	155 aa		11.14	□□□□□ -0.63
SREBF1-223	ENST00000584760	DCAF12L2	Q5VW00	463 aa		11.14	□□□□□ -0.63
SREBF1-223	ENST00000584760	NXNL2	Q5VZ03	156 aa		11.14	□□□□□ -0.63
SREBF1-223	ENST00000584760	HIST2H2AB	Q8IUE6	130 aa	Predicted RBP	11.14	□□□□□ -0.63
SREBF1-223	ENST00000584760	TCEANC	Q8N8B7	351 aa		11.14	□□□□□ -0.63
SREBF1-223	ENST00000584760	PLPP7	Q8NBV4	271 aa		11.14	□□□□□ -0.63
SREBF1-223	ENST00000584760	OR8B12	Q8NGG6	310 aa		11.14	□□□□□ -0.63
SREBF1-223	ENST00000584760	TMEM163	Q8TC26	289 aa		11.14	□□□□□ -0.63
SREBF1-223	ENST00000584760	PGAM5	Q96HS1	289 aa		11.14	□□□□□ -0.63
SREBF1-223	ENST00000584760	CNN2	Q99439	309 aa	Known RBP	11.14	□□□□□ -0.63
SREBF1-223	ENST00000584760	OSBPL10	Q9BXB5	764 aa		11.14	□□□□□ -0.63
SREBF1-223	ENST00000584760	RGCC	Q9H4X1	137 aa		11.14	□□□□□ -0.63
SREBF1-223	ENST00000584760	METTL17	Q9H7H0	456 aa	Predicted RBP	11.14	□□□□□ -0.63
SREBF1-223	ENST00000584760	NIPAL2	Q9H841	368 aa		11.14	□□□□□ -0.63
SREBF1-223	ENST00000584760	TMEM165	Q9HC07	324 aa		11.14	□□□□□ -0.63
SREBF1-223	ENST00000584760	BRD7	Q9NPI1	651 aa		11.14	□□□□□ -0.63
SREBF1-223	ENST00000584760	COPS3	Q9UNS2	423 aa		11.14	□□□□□ -0.63
SREBF1-223	ENST00000584760	SAC3D1	A6NKF1	404 aa		11.13	□□□□□ -0.63
SREBF1-223	ENST00000584760	SLC22A31	A6NKX4	558 aa		11.13	□□□□□ -0.63
SREBF1-223	ENST00000584760	ANKRD30BL	A7E2S9	258 aa		11.13	□□□□□ -0.63
SREBF1-223	ENST00000584760	RGS9	O75916	674 aa	Predicted RBP	11.13	□□□□□ -0.63
SREBF1-223	ENST00000584760	IRF2	P14316	349 aa		11.13	□□□□□ -0.63
SREBF1-223	ENST00000584760	RPS2	P15880	293 aa	Known RBP	11.13	□□□□□ -0.63
SREBF1-223	ENST00000584760	CPT2	P23786	658 aa		11.13	□□□□□ -0.63
SREBF1-223	ENST00000584760	POLR2I	P36954	125 aa	Known RBP	11.13	□□□□□ -0.63
SREBF1-223	ENST00000584760	GSK3A	P49840	483 aa		11.13	□□□□□ -0.63
SREBF1-223	ENST00000584760	HOXA4	Q00056	320 aa	Predicted RBP	11.13	□□□□□ -0.63
SREBF1-223	ENST00000584760	ROM1	Q03395	351 aa		11.13	□□□□□ -0.63
SREBF1-223	ENST00000584760	ESCO2	Q56NI9	601 aa		11.13	□□□□□ -0.63
SREBF1-223	ENST00000584760	DEGS2	Q6QHC5	323 aa		11.13	□□□□□ -0.63
SREBF1-223	ENST00000584760	MEPCE	Q7L2J0	689 aa	Known RBP	11.13	□□□□□ -0.63
SREBF1-223	ENST00000584760	C1QL2	Q7Z5L3	287 aa		11.13	□□□□□ -0.63
SREBF1-223	ENST00000584760	WDR86	Q86TI4	376 aa		11.13	□□□□□ -0.63
SREBF1-223	ENST00000584760	SPERT	Q8NA61	448 aa		11.13	□□□□□ -0.63
SREBF1-223	ENST00000584760	DEFB108B	Q8NET1	73 aa		11.13	□□□□□ -0.63
SREBF1-223	ENST00000584760	OR11L1	Q8NGX0	322 aa		11.13	□□□□□ -0.63
SREBF1-223	ENST00000584760	SGMS2	Q8NHU3	365 aa		11.13	□□□□□ -0.63
SREBF1-223	ENST00000584760	LYZL4	Q96KX0	146 aa		11.13	□□□□□ -0.63
SREBF1-223	ENST00000584760	OR8B4	Q96RC9	309 aa		11.13	□□□□□ -0.63
SREBF1-223	ENST00000584760	IL4I1	Q96RQ9	567 aa		11.13	□□□□□ -0.63
SREBF1-223	ENST00000584760	PKP2	Q99959	881 aa		11.13	□□□□□ -0.63
SREBF1-223	ENST00000584760	TMEM246	Q9BRR3	403 aa		11.13	□□□□□ -0.63
SREBF1-223	ENST00000584760	FN3KRP	Q9HA64	309 aa		11.13	□□□□□ -0.63
SREBF1-223	ENST00000584760	ADGRL4	Q9HBW9	690 aa		11.13	□□□□□ -0.63
SREBF1-223	ENST00000584760	MMP26	Q9NRE1	261 aa		11.13	□□□□□ -0.63
SREBF1-223	ENST00000584760	FAM206A	Q9NX38	181 aa		11.13	□□□□□ -0.63
SREBF1-223	ENST00000584760	OPN4	Q9UHM6	478 aa		11.13	□□□□□ -0.63
SREBF1-223	ENST00000584760	LRCH1	Q9Y2L9	728 aa		11.13	□□□□□ -0.63
SREBF1-223	ENST00000584760	PPIAL4A	Q9Y536	164 aa		11.13	□□□□□ -0.63
SREBF1-223	ENST00000584760	MEGF8	Q7Z7M0	2845 aa		11.13	□□□□□ -0.63
SREBF1-223	ENST00000584760	TENM1	Q9UKZ4	2725 aa		11.12	□□□□□ -0.63
SREBF1-223	ENST00000584760		A0A0A6YYJ9	748 aa		11.12	□□□□□ -0.63
SREBF1-223	ENST00000584760	KIR2DP1	A0A0G2JNF4	349 aa	Predicted RBP	11.12	□□□□□ -0.63
SREBF1-223	ENST00000584760	TRAPPC2L	H3BP13	241 aa		11.12	□□□□□ -0.63
SREBF1-223	ENST00000584760	PSMD9	O00233	223 aa		11.12	□□□□□ -0.63
SREBF1-223	ENST00000584760	FSHB	P01225	129 aa		11.12	□□□□□ -0.63
SREBF1-223	ENST00000584760	WNT2	P09544	360 aa		11.12	□□□□□ -0.63
SREBF1-223	ENST00000584760	ZNF12	P17014	697 aa		11.12	□□□□□ -0.63
SREBF1-223	ENST00000584760	ACKR3	P25106	362 aa		11.12	□□□□□ -0.63
SREBF1-223	ENST00000584760	DCTD	P32321	178 aa		11.12	□□□□□ -0.63
SREBF1-223	ENST00000584760	ZFP1	Q6P2D0	407 aa		11.12	□□□□□ -0.63
SREBF1-223	ENST00000584760	KCTD18	Q6PI47	426 aa	Predicted RBP	11.12	□□□□□ -0.63
SREBF1-223	ENST00000584760	KRT77	Q7Z794	578 aa		11.12	□□□□□ -0.63
SREBF1-223	ENST00000584760	GID4	Q8IVV7	300 aa		11.12	□□□□□ -0.63
SREBF1-223	ENST00000584760	TEX29	Q8N6K0	151 aa		11.12	□□□□□ -0.63
SREBF1-223	ENST00000584760	CSNK2A3	Q8NEV1	391 aa		11.12	□□□□□ -0.63
SREBF1-223	ENST00000584760	SEMA6D	Q8NFY4	1073 aa		11.12	□□□□□ -0.63
SREBF1-223	ENST00000584760	ZFAND2B	Q8WV99	257 aa		11.12	□□□□□ -0.63
SREBF1-223	ENST00000584760	GCDH	Q92947	438 aa	Predicted RBP	11.12	□□□□□ -0.63
SREBF1-223	ENST00000584760	RBM4B	Q9BQ04	359 aa	Known RBP	11.12	□□□□□ -0.63
SREBF1-223	ENST00000584760	SSBP3	Q9BWW4	388 aa	Predicted RBP	11.12	□□□□□ -0.63
SREBF1-223	ENST00000584760	TTTY10	Q9BZA0	68 aa		11.12	□□□□□ -0.63
SREBF1-223	ENST00000584760	RIBC2	Q9H4K1	309 aa		11.12	□□□□□ -0.63
SREBF1-223	ENST00000584760	PPP1R3E	Q9H7J1	279 aa		11.12	□□□□□ -0.63
SREBF1-223	ENST00000584760	HAO2	Q9NYQ3	351 aa		11.12	□□□□□ -0.63
SREBF1-223	ENST00000584760	RNF7	Q9UBF6	113 aa		11.12	□□□□□ -0.63
SREBF1-223	ENST00000584760	ZNF391	Q9UJN7	358 aa		11.12	□□□□□ -0.63
SREBF1-223	ENST00000584760	TMEM14A	Q9Y6G1	99 aa		11.12	□□□□□ -0.63
SREBF1-223	ENST00000584760	EBAG9	O00559	213 aa		11.11	□□□□□ -0.63
SREBF1-223	ENST00000584760	ZNF254	O75437	659 aa		11.11	□□□□□ -0.63
SREBF1-223	ENST00000584760	IGLV3-1	P01715	115 aa		11.11	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms