RNA–Protein interactions for RNA: ENST00000583800.1

SMCHD1-210, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-210ENST00000583800 TMEM86BQ8N661 226 aa6.45□□□□□ -1.38
SMCHD1-210ENST00000583800 OR2T12Q8NG77 320 aa6.45□□□□□ -1.38
SMCHD1-210ENST00000583800 OR5L1Q8NGL2 311 aa6.45□□□□□ -1.38
SMCHD1-210ENST00000583800 LINC01006Q8NI28 216 aa6.45□□□□□ -1.38
SMCHD1-210ENST00000583800 ACOT11Q8WXI4 607 aaPredicted RBP6.45□□□□□ -1.38
SMCHD1-210ENST00000583800 FAM71F1Q96KD3 344 aaPredicted RBP6.45□□□□□ -1.38
SMCHD1-210ENST00000583800 TSSK2Q96PF2 358 aa6.45□□□□□ -1.38
SMCHD1-210ENST00000583800 COQ7Q99807 217 aa6.45□□□□□ -1.38
SMCHD1-210ENST00000583800 NUAK2Q9H093 628 aa6.45□□□□□ -1.38
SMCHD1-210ENST00000583800 UFSP2Q9NUQ7 469 aa6.45□□□□□ -1.38
SMCHD1-210ENST00000583800 TMEM100Q9NV29 134 aa6.45□□□□□ -1.38
SMCHD1-210ENST00000583800 INTS9Q9NV88 658 aaKnown RBP6.45□□□□□ -1.38
SMCHD1-210ENST00000583800 ATPIF1Q9UII2 106 aa6.45□□□□□ -1.38
SMCHD1-210ENST00000583800 RPS6KA6Q9UK32 745 aa6.45□□□□□ -1.38
SMCHD1-210ENST00000583800 LHFPL6Q9Y693 200 aa6.45□□□□□ -1.38
SMCHD1-210ENST00000583800 POMT1Q9Y6A1 747 aa6.45□□□□□ -1.38
SMCHD1-210ENST00000583800 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.45□□□□□ -1.38
SMCHD1-210ENST00000583800 PLXNB1O43157 2135 aa6.44□□□□□ -1.38
SMCHD1-210ENST00000583800 A0A087WWL8 130 aa6.44□□□□□ -1.38
SMCHD1-210ENST00000583800 A0A0U1RQK1 487 aa6.44□□□□□ -1.38
SMCHD1-210ENST00000583800 A0A1B0GWJ7 208 aa6.44□□□□□ -1.38
SMCHD1-210ENST00000583800 ELOVL7A1L3X0 281 aa6.44□□□□□ -1.38
SMCHD1-210ENST00000583800 ZNF879B4DU55 563 aa6.44□□□□□ -1.38
SMCHD1-210ENST00000583800 P2RY10O00398 339 aa6.44□□□□□ -1.38
SMCHD1-210ENST00000583800 DCTN6O00399 190 aa6.44□□□□□ -1.38
SMCHD1-210ENST00000583800 GPR137BO60478 399 aa6.44□□□□□ -1.38
SMCHD1-210ENST00000583800 EDF1O60869 148 aaKnown RBP6.44□□□□□ -1.38
SMCHD1-210ENST00000583800 TOX4O94842 621 aa6.44□□□□□ -1.38
SMCHD1-210ENST00000583800 NDUFB2O95178 105 aa6.44□□□□□ -1.38
SMCHD1-210ENST00000583800 ZNF682O95780 498 aa6.44□□□□□ -1.38
SMCHD1-210ENST00000583800 IGHV4-59P01825 116 aa6.44□□□□□ -1.38
SMCHD1-210ENST00000583800 CD200P41217 278 aa6.44□□□□□ -1.38
SMCHD1-210ENST00000583800 CENPAP49450 140 aa6.44□□□□□ -1.38
SMCHD1-210ENST00000583800 PROK1P58294 105 aa6.44□□□□□ -1.38
SMCHD1-210ENST00000583800 FXYD6P3P58550 94 aa6.44□□□□□ -1.38
SMCHD1-210ENST00000583800 BPIFB3P59826 476 aa6.44□□□□□ -1.38
SMCHD1-210ENST00000583800 SF3A3Q12874 501 aaKnown RBP eCLIP6.44□□□□□ -1.38
SMCHD1-210ENST00000583800 GK2Q14410 553 aaPredicted RBP6.44□□□□□ -1.38
SMCHD1-210ENST00000583800 RSPO1Q2MKA7 263 aaPredicted RBP6.44□□□□□ -1.38
SMCHD1-210ENST00000583800 COQ5Q5HYK3 327 aa6.44□□□□□ -1.38
SMCHD1-210ENST00000583800 SFRP4Q6FHJ7 346 aaPredicted RBP6.44□□□□□ -1.38
SMCHD1-210ENST00000583800 TEPPQ6URK8 271 aa6.44□□□□□ -1.38
SMCHD1-210ENST00000583800 ZNF620Q6ZNG0 422 aa6.44□□□□□ -1.38
SMCHD1-210ENST00000583800 CFAP77Q6ZQR2 320 aa6.44□□□□□ -1.38
SMCHD1-210ENST00000583800 TMPRSS11FQ6ZWK6 438 aa6.44□□□□□ -1.38
SMCHD1-210ENST00000583800 KRT74Q7RTS7 529 aa6.44□□□□□ -1.38
SMCHD1-210ENST00000583800 LINC00346Q8IVM7 164 aa6.44□□□□□ -1.38
SMCHD1-210ENST00000583800 PDZD9Q8IXQ8 264 aa6.44□□□□□ -1.38
SMCHD1-210ENST00000583800 RNF113BQ8IZP6 322 aaKnown RBP6.44□□□□□ -1.38
SMCHD1-210ENST00000583800 BOLLQ8N9W6 283 aaKnown RBP6.44□□□□□ -1.38
SMCHD1-210ENST00000583800 OR11L1Q8NGX0 322 aa6.44□□□□□ -1.38
SMCHD1-210ENST00000583800 Q8TCH9 128 aa6.44□□□□□ -1.38
SMCHD1-210ENST00000583800 SSMEM1Q8WWF3 244 aa6.44□□□□□ -1.38
SMCHD1-210ENST00000583800 LZICQ8WZA0 190 aa6.44□□□□□ -1.38
SMCHD1-210ENST00000583800 DYRK2Q92630 601 aa6.44□□□□□ -1.38
SMCHD1-210ENST00000583800 LHX4Q969G2 390 aa6.44□□□□□ -1.38
SMCHD1-210ENST00000583800 WDFY2Q96P53 400 aa6.44□□□□□ -1.38
SMCHD1-210ENST00000583800 HCAR1Q9BXC0 346 aa6.44□□□□□ -1.38
SMCHD1-210ENST00000583800 NDEL1Q9GZM8 345 aa6.44□□□□□ -1.38
SMCHD1-210ENST00000583800 HDHD2Q9H0R4 259 aa6.44□□□□□ -1.38
SMCHD1-210ENST00000583800 NMNAT1Q9HAN9 279 aaPredicted RBP6.44□□□□□ -1.38
SMCHD1-210ENST00000583800 NRIP3Q9NQ35 241 aa6.44□□□□□ -1.38
SMCHD1-210ENST00000583800 ACOXLQ9NUZ1 547 aa6.44□□□□□ -1.38
SMCHD1-210ENST00000583800 VSX1Q9NZR4 365 aaPredicted RBP6.44□□□□□ -1.38
SMCHD1-210ENST00000583800 SIGLEC7Q9Y286 467 aa6.44□□□□□ -1.38
SMCHD1-210ENST00000583800 IER3IP1Q9Y5U9 82 aa6.44□□□□□ -1.38
SMCHD1-210ENST00000583800 IGHV1-69DA0A0B4J2H0 117 aa6.43□□□□□ -1.38
SMCHD1-210ENST00000583800 LOC100653049A0A140TA62 436 aa6.43□□□□□ -1.38
SMCHD1-210ENST00000583800 BBIP1A8MTZ0 92 aa6.43□□□□□ -1.38
SMCHD1-210ENST00000583800 F5H5K5 113 aa6.43□□□□□ -1.38
SMCHD1-210ENST00000583800 ADAM20O43506 726 aa6.43□□□□□ -1.38
SMCHD1-210ENST00000583800 FCN3O75636 299 aa6.43□□□□□ -1.38
SMCHD1-210ENST00000583800 KRT34O76011 436 aa6.43□□□□□ -1.38
SMCHD1-210ENST00000583800 CLPXO76031 633 aa6.43□□□□□ -1.38
SMCHD1-210ENST00000583800 IGHV1-69P01742 117 aa6.43□□□□□ -1.38
SMCHD1-210ENST00000583800 CD1AP06126 327 aa6.43□□□□□ -1.38
SMCHD1-210ENST00000583800 ACSM4P0C7M7 580 aa6.43□□□□□ -1.38
SMCHD1-210ENST00000583800 ANOS1P23352 680 aa6.43□□□□□ -1.38
SMCHD1-210ENST00000583800 CDKN2AP42771 156 aaKnown RBP6.43□□□□□ -1.38
SMCHD1-210ENST00000583800 NPY4RP50391 375 aa6.43□□□□□ -1.38
SMCHD1-210ENST00000583800 RPL15P61313 204 aaKnown RBP6.43□□□□□ -1.38
SMCHD1-210ENST00000583800 HIST1H3AP68431 136 aa6.43□□□□□ -1.38
SMCHD1-210ENST00000583800 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.43□□□□□ -1.38
SMCHD1-210ENST00000583800 COX10Q12887 443 aa6.43□□□□□ -1.38
SMCHD1-210ENST00000583800 KLF10Q13118 480 aa6.43□□□□□ -1.38
SMCHD1-210ENST00000583800 OR8B8Q15620 311 aa6.43□□□□□ -1.38
SMCHD1-210ENST00000583800 KCNMB1Q16558 191 aa6.43□□□□□ -1.38
SMCHD1-210ENST00000583800 TAF9Q16594 264 aa6.43□□□□□ -1.38
SMCHD1-210ENST00000583800 KRTAP27-1Q3LI81 207 aa6.43□□□□□ -1.38
SMCHD1-210ENST00000583800 IFI44LQ53G44 452 aa6.43□□□□□ -1.38
SMCHD1-210ENST00000583800 HIST2H3PS2Q5TEC6 136 aa6.43□□□□□ -1.38
SMCHD1-210ENST00000583800 METTL11BQ5VVY1 283 aa6.43□□□□□ -1.38
SMCHD1-210ENST00000583800 METTL21CQ5VZV1 264 aa6.43□□□□□ -1.38
SMCHD1-210ENST00000583800 GPR139Q6DWJ6 353 aa6.43□□□□□ -1.38
SMCHD1-210ENST00000583800 COLCA1Q6ZS62 124 aa6.43□□□□□ -1.38
SMCHD1-210ENST00000583800 Q6ZSV7 163 aa6.43□□□□□ -1.38
SMCHD1-210ENST00000583800 HIST2H3AQ71DI3 136 aa6.43□□□□□ -1.38
SMCHD1-210ENST00000583800 RRM2BQ7LG56 351 aa6.43□□□□□ -1.38
SMCHD1-210ENST00000583800 ADCK1Q86TW2 530 aa6.43□□□□□ -1.38
SMCHD1-210ENST00000583800 NAA40Q86UY6 237 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms