RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 GFRALQ6UXV0 394 aa8.12□□□□□ -1.11
SS18-220ENST00000582092 NRARPQ7Z6K4 114 aa8.12□□□□□ -1.11
SS18-220ENST00000582092 CDH26Q8IXH8 852 aa8.12□□□□□ -1.11
SS18-220ENST00000582092 ZNF101Q8IZC7 436 aa8.12□□□□□ -1.11
SS18-220ENST00000582092 CNEP1R1Q8N9A8 125 aa8.12□□□□□ -1.11
SS18-220ENST00000582092 CLEC18CQ8NCF0 446 aa8.12□□□□□ -1.11
SS18-220ENST00000582092 SEMA6DQ8NFY4 1073 aa8.12□□□□□ -1.11
SS18-220ENST00000582092 FAM46BQ96A09 425 aa8.12□□□□□ -1.11
SS18-220ENST00000582092 HAVCR1Q96D42 359 aa8.12□□□□□ -1.11
SS18-220ENST00000582092 ADAT3Q96EY9 351 aaPredicted RBP8.12□□□□□ -1.11
SS18-220ENST00000582092 REEP6Q96HR9 211 aa8.12□□□□□ -1.11
SS18-220ENST00000582092 ABHD1Q96SE0 405 aa8.12□□□□□ -1.11
SS18-220ENST00000582092 GFI1Q99684 422 aa8.12□□□□□ -1.11
SS18-220ENST00000582092 C7orf50Q9BRJ6 194 aaKnown RBP8.12□□□□□ -1.11
SS18-220ENST00000582092 C11orf54Q9H0W9 315 aaPredicted RBP8.12□□□□□ -1.11
SS18-220ENST00000582092 RGCCQ9H4X1 137 aa8.12□□□□□ -1.11
SS18-220ENST00000582092 CGGBP1Q9UFW8 167 aaPredicted RBP8.12□□□□□ -1.11
SS18-220ENST00000582092 SLC7A11Q9UPY5 501 aa8.12□□□□□ -1.11
SS18-220ENST00000582092 PIGLQ9Y2B2 252 aa8.12□□□□□ -1.11
SS18-220ENST00000582092 CACNG2Q9Y698 323 aa8.12□□□□□ -1.11
SS18-220ENST00000582092 ICE1Q9Y2F5 2266 aa8.12□□□□□ -1.11
SS18-220ENST00000582092 TRAV18A0A075B6X5 111 aa8.11□□□□□ -1.11
SS18-220ENST00000582092 A0A0A6YYH2 397 aa8.11□□□□□ -1.11
SS18-220ENST00000582092 A0A1B0GTI1 187 aa8.11□□□□□ -1.11
SS18-220ENST00000582092 OR14I1A6ND48 311 aa8.11□□□□□ -1.11
SS18-220ENST00000582092 A6NJ64 397 aa8.11□□□□□ -1.11
SS18-220ENST00000582092 GABARAPH6UMI1 98 aa8.11□□□□□ -1.11
SS18-220ENST00000582092 XRCC2O43543 280 aa8.11□□□□□ -1.11
SS18-220ENST00000582092 GSTZ1O43708 216 aaPredicted RBP8.11□□□□□ -1.11
SS18-220ENST00000582092 ORC5O43913 435 aa8.11□□□□□ -1.11
SS18-220ENST00000582092 LMX1BO60663 402 aa8.11□□□□□ -1.11
SS18-220ENST00000582092 BPNT1O95861 308 aa8.11□□□□□ -1.11
SS18-220ENST00000582092 TGM6O95932 706 aa8.11□□□□□ -1.11
SS18-220ENST00000582092 DHFRP00374 187 aa8.11□□□□□ -1.11
SS18-220ENST00000582092 HLA-DQB1P01920 261 aa8.11□□□□□ -1.11
SS18-220ENST00000582092 ALDOBP05062 364 aa8.11□□□□□ -1.11
SS18-220ENST00000582092 ITGA5P08648 1049 aa8.11□□□□□ -1.11
SS18-220ENST00000582092 DBHP09172 617 aa8.11□□□□□ -1.11
SS18-220ENST00000582092 CD3GP09693 182 aa8.11□□□□□ -1.11
SS18-220ENST00000582092 PATE4P0C8F1 98 aa8.11□□□□□ -1.11
SS18-220ENST00000582092 UBBP0CG47 229 aa8.11□□□□□ -1.11
SS18-220ENST00000582092 RAB6AP20340 208 aa8.11□□□□□ -1.11
SS18-220ENST00000582092 CCL1P22362 96 aa8.11□□□□□ -1.11
SS18-220ENST00000582092 PRKACBP22694 351 aa8.11□□□□□ -1.11
SS18-220ENST00000582092 AGTR1P30556 359 aa8.11□□□□□ -1.11
SS18-220ENST00000582092 OR3A2P47893 321 aa8.11□□□□□ -1.11
SS18-220ENST00000582092 SNTB2Q13425 540 aaKnown RBP8.11□□□□□ -1.11
SS18-220ENST00000582092 CNN3Q15417 329 aaKnown RBP8.11□□□□□ -1.11
SS18-220ENST00000582092 C4orf17Q53FE4 359 aa8.11□□□□□ -1.11
SS18-220ENST00000582092 C1orf100Q5SVJ3 147 aa8.11□□□□□ -1.11
SS18-220ENST00000582092 RAB12Q6IQ22 244 aa8.11□□□□□ -1.11
SS18-220ENST00000582092 MTFR2Q6P444 385 aa8.11□□□□□ -1.11
SS18-220ENST00000582092 PLXDC2Q6UX71 529 aa8.11□□□□□ -1.11
SS18-220ENST00000582092 NUFIP2Q7Z417 695 aaKnown RBP8.11□□□□□ -1.11
SS18-220ENST00000582092 FGD2Q7Z6J4 655 aa8.11□□□□□ -1.11
SS18-220ENST00000582092 ADGRE4PQ86SQ3 457 aa8.11□□□□□ -1.11
SS18-220ENST00000582092 NAA40Q86UY6 237 aa8.11□□□□□ -1.11
SS18-220ENST00000582092 ANGPTL5Q86XS5 388 aa8.11□□□□□ -1.11
SS18-220ENST00000582092 CCDC36Q8IYA8 594 aa8.11□□□□□ -1.11
SS18-220ENST00000582092 CHST4Q8NCG5 386 aa8.11□□□□□ -1.11
SS18-220ENST00000582092 OR5M9Q8NGP3 310 aa8.11□□□□□ -1.11
SS18-220ENST00000582092 SLC7A6Q92536 515 aa8.11□□□□□ -1.11
SS18-220ENST00000582092 WNT2BQ93097 391 aa8.11□□□□□ -1.11
SS18-220ENST00000582092 SLX1AQ9BQ83 275 aa8.11□□□□□ -1.11
SS18-220ENST00000582092 PRDM14Q9GZV8 571 aa8.11□□□□□ -1.11
SS18-220ENST00000582092 WNT5BQ9H1J7 359 aa8.11□□□□□ -1.11
SS18-220ENST00000582092 DPAGT1Q9H3H5 408 aa8.11□□□□□ -1.11
SS18-220ENST00000582092 METTL17Q9H7H0 456 aaPredicted RBP8.11□□□□□ -1.11
SS18-220ENST00000582092 ELL3Q9HB65 397 aaPredicted RBP8.11□□□□□ -1.11
SS18-220ENST00000582092 RBFOX1Q9NWB1 397 aaKnown RBP8.11□□□□□ -1.11
SS18-220ENST00000582092 TAS2R8Q9NYW2 309 aa8.11□□□□□ -1.11
SS18-220ENST00000582092 EIF3KQ9UBQ5 218 aaKnown RBP8.11□□□□□ -1.11
SS18-220ENST00000582092 ATPIF1Q9UII2 106 aa8.11□□□□□ -1.11
SS18-220ENST00000582092 TBC1D24Q9ULP9 559 aa8.11□□□□□ -1.11
SS18-220ENST00000582092 ING4Q9UNL4 249 aa8.11□□□□□ -1.11
SS18-220ENST00000582092 MRPS28Q9Y2Q9 187 aaKnown RBP8.11□□□□□ -1.11
SS18-220ENST00000582092 TMEM272A0A1B0GTI8 110 aa8.1□□□□□ -1.11
SS18-220ENST00000582092 LOC390937A0A1W2PQ73 354 aa8.1□□□□□ -1.11
SS18-220ENST00000582092 NAP1L6A6NFF2 107 aa8.1□□□□□ -1.11
SS18-220ENST00000582092 SERPINA5P05154 406 aa8.1□□□□□ -1.11
SS18-220ENST00000582092 COX5BP10606 129 aa8.1□□□□□ -1.11
SS18-220ENST00000582092 GABRA1P14867 456 aa8.1□□□□□ -1.11
SS18-220ENST00000582092 SPNP16150 400 aa8.1□□□□□ -1.11
SS18-220ENST00000582092 CFPP27918 469 aa8.1□□□□□ -1.11
SS18-220ENST00000582092 PRSS3P35030 304 aa8.1□□□□□ -1.11
SS18-220ENST00000582092 RCVRNP35243 200 aa8.1□□□□□ -1.11
SS18-220ENST00000582092 TAS2R20P59543 309 aa8.1□□□□□ -1.11
SS18-220ENST00000582092 RAB1AP62820 205 aa8.1□□□□□ -1.11
SS18-220ENST00000582092 FAM214BQ7L5A3 538 aa8.1□□□□□ -1.11
SS18-220ENST00000582092 PRSS45Q7RTY3 260 aa8.1□□□□□ -1.11
SS18-220ENST00000582092 MRPL21Q7Z2W9 205 aaKnown RBP8.1□□□□□ -1.11
SS18-220ENST00000582092 OR52N4Q8NGI2 321 aa8.1□□□□□ -1.11
SS18-220ENST00000582092 OR51A2Q8NGJ7 313 aa8.1□□□□□ -1.11
SS18-220ENST00000582092 OR5L1Q8NGL2 311 aa8.1□□□□□ -1.11
SS18-220ENST00000582092 OR14K1Q8NGZ2 314 aa8.1□□□□□ -1.11
SS18-220ENST00000582092 KCNG3Q8TAE7 436 aa8.1□□□□□ -1.11
SS18-220ENST00000582092 SMIM4Q8WVI0 70 aa8.1□□□□□ -1.11
SS18-220ENST00000582092 PTX4Q96A99 478 aa8.1□□□□□ -1.11
SS18-220ENST00000582092 DACT3Q96B18 629 aaPredicted RBP8.1□□□□□ -1.11
SS18-220ENST00000582092 SGK3Q96BR1 496 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms