RNA–Protein interactions for RNA: ENST00000580751.5

SS18-216, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-216ENST00000580751 ELMOD2Q8IZ81 293 aa13.32□□□□□ -0.28
SS18-216ENST00000580751 ZNF283Q8N7M2 679 aa13.32□□□□□ -0.28
SS18-216ENST00000580751 SYNPRQ8TBG9 265 aa13.32□□□□□ -0.28
SS18-216ENST00000580751 SLC25A40Q8TBP6 338 aa13.32□□□□□ -0.28
SS18-216ENST00000580751 IGFBPL1Q8WX77 278 aa13.32□□□□□ -0.28
SS18-216ENST00000580751 ISOC1Q96CN7 298 aa13.32□□□□□ -0.28
SS18-216ENST00000580751 OR2J1Q9GZK6 312 aa13.32□□□□□ -0.28
SS18-216ENST00000580751 RGCCQ9H4X1 137 aa13.32□□□□□ -0.28
SS18-216ENST00000580751 G6PC2Q9NQR9 355 aa13.32□□□□□ -0.28
SS18-216ENST00000580751 OR52A1Q9UKL2 312 aa13.32□□□□□ -0.28
SS18-216ENST00000580751 SIRT4Q9Y6E7 314 aaPredicted RBP13.32□□□□□ -0.28
SS18-216ENST00000580751 A0A0U1RQV5 110 aa13.31□□□□□ -0.28
SS18-216ENST00000580751 TRIM64BA6NI03 449 aa13.31□□□□□ -0.28
SS18-216ENST00000580751 SC5DO75845 299 aa13.31□□□□□ -0.28
SS18-216ENST00000580751 RGS9O75916 674 aaPredicted RBP13.31□□□□□ -0.28
SS18-216ENST00000580751 ZFPL1O95159 310 aa13.31□□□□□ -0.28
SS18-216ENST00000580751 ZNF12P17014 697 aa13.31□□□□□ -0.28
SS18-216ENST00000580751 GADD45AP24522 165 aa13.31□□□□□ -0.28
SS18-216ENST00000580751 MAPK3P27361 379 aaPredicted RBP13.31□□□□□ -0.28
SS18-216ENST00000580751 PSMB10P40306 273 aa13.31□□□□□ -0.28
SS18-216ENST00000580751 NANOS3P60323 173 aaKnown RBP13.31□□□□□ -0.28
SS18-216ENST00000580751 SLC3A1Q07837 685 aa13.31□□□□□ -0.28
SS18-216ENST00000580751 CTF1Q16619 201 aa13.31□□□□□ -0.28
SS18-216ENST00000580751 WDR38Q5JTN6 314 aa13.31□□□□□ -0.28
SS18-216ENST00000580751 SPATA46Q5T0L3 261 aa13.31□□□□□ -0.28
SS18-216ENST00000580751 BCL2L15Q5TBC7 163 aa13.31□□□□□ -0.28
SS18-216ENST00000580751 MBNL2Q5VZF2 373 aaKnown RBP13.31□□□□□ -0.28
SS18-216ENST00000580751 C11orf71Q6IPW1 123 aa13.31□□□□□ -0.28
SS18-216ENST00000580751 SLC16A12Q6ZSM3 486 aa13.31□□□□□ -0.28
SS18-216ENST00000580751 PRSS45Q7RTY3 260 aa13.31□□□□□ -0.28
SS18-216ENST00000580751 PRSS35Q8N3Z0 413 aa13.31□□□□□ -0.28
SS18-216ENST00000580751 ZNF676Q8N7Q3 588 aa13.31□□□□□ -0.28
SS18-216ENST00000580751 KLF14Q8TD94 323 aaPredicted RBP13.31□□□□□ -0.28
SS18-216ENST00000580751 GPR148Q8TDV2 347 aa13.31□□□□□ -0.28
SS18-216ENST00000580751 MARS2Q96GW9 593 aaKnown RBP13.31□□□□□ -0.28
SS18-216ENST00000580751 MRPL37Q9BZE1 423 aaKnown RBP13.31□□□□□ -0.28
SS18-216ENST00000580751 DUSP13Q9UII6 198 aa13.31□□□□□ -0.28
SS18-216ENST00000580751 GPR160Q9UJ42 338 aa13.31□□□□□ -0.28
SS18-216ENST00000580751 PMF1-BGLAPU3KQ54 211 aa13.31□□□□□ -0.28
SS18-216ENST00000580751 CSMD1Q96PZ7 3565 aa13.31□□□□□ -0.28
SS18-216ENST00000580751 IGLV3-9A0A075B6K5 115 aa13.3□□□□□ -0.28
SS18-216ENST00000580751 A0A1W2PPW3 197 aa13.3□□□□□ -0.28
SS18-216ENST00000580751 CCDC160A6NGH7 325 aa13.3□□□□□ -0.28
SS18-216ENST00000580751 ARL6IP5O75915 188 aa13.3□□□□□ -0.28
SS18-216ENST00000580751 PNPP00491 289 aa13.3□□□□□ -0.28
SS18-216ENST00000580751 CD8AP01732 235 aa13.3□□□□□ -0.28
SS18-216ENST00000580751 ANXA2P07355 339 aaKnown RBP13.3□□□□□ -0.28
SS18-216ENST00000580751 ACHEP22303 614 aa13.3□□□□□ -0.28
SS18-216ENST00000580751 ZNF121P58317 390 aaPredicted RBP13.3□□□□□ -0.28
SS18-216ENST00000580751 MALLQ13021 153 aa13.3□□□□□ -0.28
SS18-216ENST00000580751 MOGQ16653 247 aa13.3□□□□□ -0.28
SS18-216ENST00000580751 MSMPQ1L6U9 139 aa13.3□□□□□ -0.28
SS18-216ENST00000580751 SWI5Q1ZZU3 235 aa13.3□□□□□ -0.28
SS18-216ENST00000580751 ZFP41Q8N8Y5 198 aa13.3□□□□□ -0.28
SS18-216ENST00000580751 MBD6Q96DN6 1003 aa13.3□□□□□ -0.28
SS18-216ENST00000580751 SYT3Q9BQG1 590 aa13.3□□□□□ -0.28
SS18-216ENST00000580751 PBOV1Q9GZY1 135 aa13.3□□□□□ -0.28
SS18-216ENST00000580751 BEX4Q9NWD9 120 aaPredicted RBP13.3□□□□□ -0.28
SS18-216ENST00000580751 FZR1Q9UM11 496 aa13.3□□□□□ -0.28
SS18-216ENST00000580751 HHLA2Q9UM44 414 aa13.3□□□□□ -0.28
SS18-216ENST00000580751 STARD10Q9Y365 291 aa13.3□□□□□ -0.28
SS18-216ENST00000580751 H3BMQ9 156 aa13.29□□□□□ -0.28
SS18-216ENST00000580751 M0R233 179 aa13.29□□□□□ -0.28
SS18-216ENST00000580751 IGHV3-13P01766 116 aa13.29□□□□□ -0.28
SS18-216ENST00000580751 SLC2A1P11166 492 aa13.29□□□□□ -0.28
SS18-216ENST00000580751 CCL1P22362 96 aa13.29□□□□□ -0.28
SS18-216ENST00000580751 CFL1P23528 166 aaKnown RBP13.29□□□□□ -0.28
SS18-216ENST00000580751 KIR3DL2P43630 455 aa13.29□□□□□ -0.28
SS18-216ENST00000580751 RPS25P62851 125 aaKnown RBP13.29□□□□□ -0.28
SS18-216ENST00000580751 MST1LQ2TV78 715 aa13.29□□□□□ -0.28
SS18-216ENST00000580751 UNQ9370/PRO34162Q6UXP9 181 aa13.29□□□□□ -0.28
SS18-216ENST00000580751 FBXW12Q6X9E4 464 aa13.29□□□□□ -0.28
SS18-216ENST00000580751 Q6ZSR3 168 aa13.29□□□□□ -0.28
SS18-216ENST00000580751 NAA40Q86UY6 237 aa13.29□□□□□ -0.28
SS18-216ENST00000580751 C10orf35Q96D05 121 aa13.29□□□□□ -0.28
SS18-216ENST00000580751 TMED9Q9BVK6 235 aa13.29□□□□□ -0.28
SS18-216ENST00000580751 CACNG6Q9BXT2 260 aa13.29□□□□□ -0.28
SS18-216ENST00000580751 OR10A2Q9H208 303 aa13.29□□□□□ -0.28
SS18-216ENST00000580751 OR51E2Q9H255 320 aa13.29□□□□□ -0.28
SS18-216ENST00000580751 OPA3Q9H6K4 179 aa13.29□□□□□ -0.28
SS18-216ENST00000580751 DYNLRB1Q9NP97 96 aa13.29□□□□□ -0.28
SS18-216ENST00000580751 PTTG3PQ9NZH4 202 aa13.29□□□□□ -0.28
SS18-216ENST00000580751 CGGBP1Q9UFW8 167 aaPredicted RBP13.29□□□□□ -0.28
SS18-216ENST00000580751 USF3Q68DE3 2245 aa13.29□□□□□ -0.28
SS18-216ENST00000580751 MYO9AB2RTY4 2548 aa13.28□□□□□ -0.28
SS18-216ENST00000580751 TRBV5-5A0A0J9YX44 114 aa13.28□□□□□ -0.28
SS18-216ENST00000580751 LOC390937A0A1W2PQ73 354 aa13.28□□□□□ -0.28
SS18-216ENST00000580751 DHRS7CA6NNS2 312 aa13.28□□□□□ -0.28
SS18-216ENST00000580751 H7C417 338 aa13.28□□□□□ -0.28
SS18-216ENST00000580751 OVOL3O00110 214 aa13.28□□□□□ -0.28
SS18-216ENST00000580751 XRCC2O43543 280 aa13.28□□□□□ -0.28
SS18-216ENST00000580751 GPX5O75715 221 aa13.28□□□□□ -0.28
SS18-216ENST00000580751 IGLV3-1P01715 115 aa13.28□□□□□ -0.28
SS18-216ENST00000580751 TTRP02766 147 aa13.28□□□□□ -0.28
SS18-216ENST00000580751 RAC2P15153 192 aa13.28□□□□□ -0.28
SS18-216ENST00000580751 MPV17P39210 176 aa13.28□□□□□ -0.28
SS18-216ENST00000580751 PPOXP50336 477 aa13.28□□□□□ -0.28
SS18-216ENST00000580751 RPS11P62280 158 aaKnown RBP eCLIP13.28□□□□□ -0.28
SS18-216ENST00000580751 FABP5Q01469 135 aa13.28□□□□□ -0.28
SS18-216ENST00000580751 MFGE8Q08431 387 aaPredicted RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms