RNA–Protein interactions for RNA: ENST00000580158.1

KPNB1-209, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2

Gene KPNB1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-209ENST00000580158 SSX2Q16385 188 aa4.71□□□□□ -1.66
KPNB1-209ENST00000580158 SRSF7Q16629 238 aaKnown RBP eCLIP4.71□□□□□ -1.66
KPNB1-209ENST00000580158 ABCA11PQ4W5N1 156 aa4.71□□□□□ -1.66
KPNB1-209ENST00000580158 WDR38Q5JTN6 314 aa4.71□□□□□ -1.66
KPNB1-209ENST00000580158 C9orf152Q5JTZ5 239 aa4.71□□□□□ -1.66
KPNB1-209ENST00000580158 C18orf65Q6ZTR6 163 aa4.71□□□□□ -1.66
KPNB1-209ENST00000580158 LHFPL4Q7Z7J7 247 aa4.71□□□□□ -1.66
KPNB1-209ENST00000580158 ZNF429Q86V71 674 aa4.71□□□□□ -1.66
KPNB1-209ENST00000580158 RANBP3LQ86VV4 465 aaPredicted RBP4.71□□□□□ -1.66
KPNB1-209ENST00000580158 ANKRD46Q86W74 232 aa4.71□□□□□ -1.66
KPNB1-209ENST00000580158 RIMKLAQ8IXN7 391 aa4.71□□□□□ -1.66
KPNB1-209ENST00000580158 GCSAMQ8N6F7 178 aa4.71□□□□□ -1.66
KPNB1-209ENST00000580158 FNDC5Q8NAU1 212 aa4.71□□□□□ -1.66
KPNB1-209ENST00000580158 OR8J2Q8NGG1 315 aa4.71□□□□□ -1.66
KPNB1-209ENST00000580158 FBXO25Q8TCJ0 367 aa4.71□□□□□ -1.66
KPNB1-209ENST00000580158 SPRYD4Q8WW59 207 aaPredicted RBP4.71□□□□□ -1.66
KPNB1-209ENST00000580158 ST6GALNAC6Q969X2 333 aa4.71□□□□□ -1.66
KPNB1-209ENST00000580158 APOBEC3DQ96AK3 386 aaPredicted RBP4.71□□□□□ -1.66
KPNB1-209ENST00000580158 TMEM43Q9BTV4 400 aa4.71□□□□□ -1.66
KPNB1-209ENST00000580158 C1orf50Q9BV19 199 aa4.71□□□□□ -1.66
KPNB1-209ENST00000580158 MRPL13Q9BYD1 178 aaKnown RBP4.71□□□□□ -1.66
KPNB1-209ENST00000580158 TMEM27Q9HBJ8 222 aa4.71□□□□□ -1.66
KPNB1-209ENST00000580158 C1orf123Q9NWV4 160 aa4.71□□□□□ -1.66
KPNB1-209ENST00000580158 TAS2R5Q9NYW4 299 aa4.71□□□□□ -1.66
KPNB1-209ENST00000580158 P2RX2Q9UBL9 471 aa4.71□□□□□ -1.66
KPNB1-209ENST00000580158 SLC25A10Q9UBX3 287 aaPredicted RBP4.71□□□□□ -1.66
KPNB1-209ENST00000580158 TBL2Q9Y4P3 447 aaKnown RBP4.71□□□□□ -1.66
KPNB1-209ENST00000580158 A0A0G2JPF8 293 aa4.7□□□□□ -1.66
KPNB1-209ENST00000580158 A0A1B0GWJ7 208 aa4.7□□□□□ -1.66
KPNB1-209ENST00000580158 A0A1W2PPL8 197 aa4.7□□□□□ -1.66
KPNB1-209ENST00000580158 FAM90A8PA6NJQ4 464 aa4.7□□□□□ -1.66
KPNB1-209ENST00000580158 HNRNPCL2B2RXH8 293 aa4.7□□□□□ -1.66
KPNB1-209ENST00000580158 HNRNPCL3B7ZW38 293 aa4.7□□□□□ -1.66
KPNB1-209ENST00000580158 BLOC1S5-TXNDC5H3BN57 136 aa4.7□□□□□ -1.66
KPNB1-209ENST00000580158 GMDSO60547 372 aa4.7□□□□□ -1.66
KPNB1-209ENST00000580158 FMO6PO60774 539 aa4.7□□□□□ -1.66
KPNB1-209ENST00000580158 HNRNPCL1O60812 293 aaKnown RBP4.7□□□□□ -1.66
KPNB1-209ENST00000580158 RHBDL1O75783 438 aa4.7□□□□□ -1.66
KPNB1-209ENST00000580158 GRPP07492 148 aa4.7□□□□□ -1.66
KPNB1-209ENST00000580158 DUX4L4P0CJ87 422 aa4.7□□□□□ -1.66
KPNB1-209ENST00000580158 HNRNPCL4P0DMR1 293 aa4.7□□□□□ -1.66
KPNB1-209ENST00000580158 IGHV4-30-4P0DP06 118 aa4.7□□□□□ -1.66
KPNB1-209ENST00000580158 MYL2P10916 166 aa4.7□□□□□ -1.66
KPNB1-209ENST00000580158 UMPSP11172 480 aa4.7□□□□□ -1.66
KPNB1-209ENST00000580158 COX7A1P24310 79 aa4.7□□□□□ -1.66
KPNB1-209ENST00000580158 TGM4P49221 684 aa4.7□□□□□ -1.66
KPNB1-209ENST00000580158 DAP3P51398 398 aaKnown RBP4.7□□□□□ -1.66
KPNB1-209ENST00000580158 DYNLT3P51808 116 aa4.7□□□□□ -1.66
KPNB1-209ENST00000580158 PLTPP55058 493 aa4.7□□□□□ -1.66
KPNB1-209ENST00000580158 CLDN8P56748 225 aa4.7□□□□□ -1.66
KPNB1-209ENST00000580158 OR12D2P58182 307 aa4.7□□□□□ -1.66
KPNB1-209ENST00000580158 SLC35B1P78383 322 aa4.7□□□□□ -1.66
KPNB1-209ENST00000580158 CAV1Q03135 178 aa4.7□□□□□ -1.66
KPNB1-209ENST00000580158 SEC23BQ15437 767 aa4.7□□□□□ -1.66
KPNB1-209ENST00000580158 C16orf89Q6UX73 402 aa4.7□□□□□ -1.66
KPNB1-209ENST00000580158 ZNF329Q86UD4 541 aa4.7□□□□□ -1.66
KPNB1-209ENST00000580158 SGPP2Q8IWX5 399 aa4.7□□□□□ -1.66
KPNB1-209ENST00000580158 MKXQ8IYA7 352 aa4.7□□□□□ -1.66
KPNB1-209ENST00000580158 COMMD1Q8N668 190 aa4.7□□□□□ -1.66
KPNB1-209ENST00000580158 FAM216BQ8N7L0 139 aa4.7□□□□□ -1.66
KPNB1-209ENST00000580158 OR4Q3Q8NH05 313 aa4.7□□□□□ -1.66
KPNB1-209ENST00000580158 FNDC8Q8TC99 324 aa4.7□□□□□ -1.66
KPNB1-209ENST00000580158 CHPT1Q8WUD6 406 aa4.7□□□□□ -1.66
KPNB1-209ENST00000580158 MED30Q96HR3 178 aa4.7□□□□□ -1.66
KPNB1-209ENST00000580158 RBP7Q96R05 134 aa4.7□□□□□ -1.66
KPNB1-209ENST00000580158 TUBB1Q9H4B7 451 aa4.7□□□□□ -1.66
KPNB1-209ENST00000580158 UGT2A1Q9Y4X1 527 aa4.7□□□□□ -1.66
KPNB1-209ENST00000580158 DNAJC15Q9Y5T4 150 aa4.7□□□□□ -1.66
KPNB1-209ENST00000580158 KMT2AQ03164 3969 aa4.7□□□□□ -1.66
KPNB1-209ENST00000580158 NUPR2A6NF83 97 aa4.69□□□□□ -1.66
KPNB1-209ENST00000580158 TRIM64CA6NLI5 447 aa4.69□□□□□ -1.66
KPNB1-209ENST00000580158 PRSS47A8MTI9 375 aa4.69□□□□□ -1.66
KPNB1-209ENST00000580158 A8MZ25 164 aa4.69□□□□□ -1.66
KPNB1-209ENST00000580158 GOLGA6L6A8MZA4 724 aa4.69□□□□□ -1.66
KPNB1-209ENST00000580158 J3KRW8 73 aa4.69□□□□□ -1.66
KPNB1-209ENST00000580158 ACOT8O14734 319 aa4.69□□□□□ -1.66
KPNB1-209ENST00000580158 KRT75O95678 551 aa4.69□□□□□ -1.66
KPNB1-209ENST00000580158 CH25HO95992 272 aa4.69□□□□□ -1.66
KPNB1-209ENST00000580158 CSTBP04080 98 aaKnown RBP4.69□□□□□ -1.66
KPNB1-209ENST00000580158 ARG1P05089 322 aa4.69□□□□□ -1.66
KPNB1-209ENST00000580158 BCHEP06276 602 aa4.69□□□□□ -1.66
KPNB1-209ENST00000580158 PGA5P0DJD9 388 aa4.69□□□□□ -1.66
KPNB1-209ENST00000580158 SPNP16150 400 aa4.69□□□□□ -1.66
KPNB1-209ENST00000580158 MSR1P21757 451 aa4.69□□□□□ -1.66
KPNB1-209ENST00000580158 BGNP21810 368 aa4.69□□□□□ -1.66
KPNB1-209ENST00000580158 CA6P23280 308 aa4.69□□□□□ -1.66
KPNB1-209ENST00000580158 OR3A4PP47883 348 aa4.69□□□□□ -1.66
KPNB1-209ENST00000580158 POU3F4P49335 361 aa4.69□□□□□ -1.66
KPNB1-209ENST00000580158 SLC34A1Q06495 639 aa4.69□□□□□ -1.66
KPNB1-209ENST00000580158 MAD2L1Q13257 205 aaPredicted RBP4.69□□□□□ -1.66
KPNB1-209ENST00000580158 KIR2DS1Q14954 304 aa4.69□□□□□ -1.66
KPNB1-209ENST00000580158 UGT3A2Q3SY77 523 aa4.69□□□□□ -1.66
KPNB1-209ENST00000580158 C6orf136Q5SQH8 315 aa4.69□□□□□ -1.66
KPNB1-209ENST00000580158 RNLSQ5VYX0 342 aa4.69□□□□□ -1.66
KPNB1-209ENST00000580158 SLC25A47Q6Q0C1 308 aa4.69□□□□□ -1.66
KPNB1-209ENST00000580158 ZNF826PQ6ZT77 177 aa4.69□□□□□ -1.66
KPNB1-209ENST00000580158 LINC00336Q6ZUF6 198 aa4.69□□□□□ -1.66
KPNB1-209ENST00000580158 NANOGNBQ7Z5D8 188 aa4.69□□□□□ -1.66
KPNB1-209ENST00000580158 CPLX4Q7Z7G2 160 aa4.69□□□□□ -1.66
KPNB1-209ENST00000580158 C10orf107Q8IVU9 208 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms