RNA–Protein interactions for RNA: ENST00000579727.5

RARA-209, Transcript of retinoic acid receptor alpha, human

TSL 4

Gene RARA, Length 564 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RARA-209	ENST00000579727	MSI2	Q96DH6	328 aa	Known RBP	13.79	□□□□□ -0.2
RARA-209	ENST00000579727	PBOV1	Q9GZY1	135 aa		13.79	□□□□□ -0.2
RARA-209	ENST00000579727	GCM1	Q9NP62	436 aa		13.79	□□□□□ -0.2
RARA-209	ENST00000579727	AMBN	Q9NP70	447 aa		13.79	□□□□□ -0.2
RARA-209	ENST00000579727	UFSP2	Q9NUQ7	469 aa		13.79	□□□□□ -0.2
RARA-209	ENST00000579727		A0A1B0GWJ7	208 aa		13.78	□□□□□ -0.2
RARA-209	ENST00000579727	ANKRD30BL	A7E2S9	258 aa		13.78	□□□□□ -0.2
RARA-209	ENST00000579727	FAM157A	C9JC47	383 aa		13.78	□□□□□ -0.2
RARA-209	ENST00000579727	SLC16A6	O15403	523 aa		13.78	□□□□□ -0.2
RARA-209	ENST00000579727	SRSF10	O75494	262 aa	Known RBP	13.78	□□□□□ -0.2
RARA-209	ENST00000579727	CYB5R3	P00387	301 aa	Predicted RBP	13.78	□□□□□ -0.2
RARA-209	ENST00000579727	KRT8	P05787	483 aa		13.78	□□□□□ -0.2
RARA-209	ENST00000579727	OR2T7	P0C7T2	308 aa		13.78	□□□□□ -0.2
RARA-209	ENST00000579727	ACKR3	P25106	362 aa		13.78	□□□□□ -0.2
RARA-209	ENST00000579727	GZMK	P49863	264 aa		13.78	□□□□□ -0.2
RARA-209	ENST00000579727	ZNF91	Q05481	1191 aa		13.78	□□□□□ -0.2
RARA-209	ENST00000579727	EGR3	Q06889	387 aa		13.78	□□□□□ -0.2
RARA-209	ENST00000579727	TMED1	Q13445	227 aa		13.78	□□□□□ -0.2
RARA-209	ENST00000579727	ODF4	Q2M2E3	257 aa		13.78	□□□□□ -0.2
RARA-209	ENST00000579727	TP53I3	Q53FA7	332 aa		13.78	□□□□□ -0.2
RARA-209	ENST00000579727	SLC25A30	Q5SVS4	291 aa		13.78	□□□□□ -0.2
RARA-209	ENST00000579727	OGFRL1	Q5TC84	451 aa	Predicted RBP	13.78	□□□□□ -0.2
RARA-209	ENST00000579727	CYB5R2	Q6BCY4	276 aa		13.78	□□□□□ -0.2
RARA-209	ENST00000579727	OR2T27	Q8NH04	317 aa		13.78	□□□□□ -0.2
RARA-209	ENST00000579727	OR51E1	Q8TCB6	317 aa		13.78	□□□□□ -0.2
RARA-209	ENST00000579727	APH1B	Q8WW43	257 aa		13.78	□□□□□ -0.2
RARA-209	ENST00000579727	RAB1C	Q92928	201 aa		13.78	□□□□□ -0.2
RARA-209	ENST00000579727	TIMD4	Q96H15	378 aa		13.78	□□□□□ -0.2
RARA-209	ENST00000579727	FAM71F1	Q96KD3	344 aa	Predicted RBP	13.78	□□□□□ -0.2
RARA-209	ENST00000579727	LPAR2	Q9HBW0	351 aa		13.78	□□□□□ -0.2
RARA-209	ENST00000579727	MRPL15	Q9P015	296 aa	Known RBP	13.78	□□□□□ -0.2
RARA-209	ENST00000579727	LOC100289279	A0A1B0GTE1	492 aa		13.77	□□□□□ -0.21
RARA-209	ENST00000579727	LOC110117498-PIK3R3	F6TDL0	507 aa		13.77	□□□□□ -0.21
RARA-209	ENST00000579727	CASQ2	O14958	399 aa	Predicted RBP	13.77	□□□□□ -0.21
RARA-209	ENST00000579727	ABCA1	O95477	2261 aa		13.77	□□□□□ -0.21
RARA-209	ENST00000579727	DBT	P11182	482 aa	Known RBP	13.77	□□□□□ -0.21
RARA-209	ENST00000579727	PMEL	P40967	661 aa		13.77	□□□□□ -0.21
RARA-209	ENST00000579727	CD200	P41217	278 aa		13.77	□□□□□ -0.21
RARA-209	ENST00000579727	MPPED2	Q15777	294 aa		13.77	□□□□□ -0.21
RARA-209	ENST00000579727	SMN1	Q16637	294 aa	Known RBP	13.77	□□□□□ -0.21
RARA-209	ENST00000579727	FAM201A	Q5SY85	155 aa		13.77	□□□□□ -0.21
RARA-209	ENST00000579727	BCL2L15	Q5TBC7	163 aa		13.77	□□□□□ -0.21
RARA-209	ENST00000579727	PACRGL	Q8N7B6	248 aa		13.77	□□□□□ -0.21
RARA-209	ENST00000579727	RHOXF1	Q8NHV9	184 aa		13.77	□□□□□ -0.21
RARA-209	ENST00000579727	LGALS12	Q96DT0	336 aa		13.77	□□□□□ -0.21
RARA-209	ENST00000579727	RDH12	Q96NR8	316 aa		13.77	□□□□□ -0.21
RARA-209	ENST00000579727	SIGLEC11	Q96RL6	698 aa		13.77	□□□□□ -0.21
RARA-209	ENST00000579727	GAL3ST1	Q99999	423 aa		13.77	□□□□□ -0.21
RARA-209	ENST00000579727	PAPOLG	Q9BWT3	736 aa	Known RBP	13.77	□□□□□ -0.21
RARA-209	ENST00000579727	RGCC	Q9H4X1	137 aa		13.77	□□□□□ -0.21
RARA-209	ENST00000579727	DCLRE1B	Q9H816	532 aa		13.77	□□□□□ -0.21
RARA-209	ENST00000579727	UBAP1	Q9NZ09	502 aa		13.77	□□□□□ -0.21
RARA-209	ENST00000579727	NUFIP1	Q9UHK0	495 aa	Known RBP	13.77	□□□□□ -0.21
RARA-209	ENST00000579727	GNG8	Q9UK08	70 aa		13.77	□□□□□ -0.21
RARA-209	ENST00000579727	SLC22A13	Q9Y226	551 aa		13.77	□□□□□ -0.21
RARA-209	ENST00000579727	RHBDD3	Q9Y3P4	386 aa		13.77	□□□□□ -0.21
RARA-209	ENST00000579727	NPTN	Q9Y639	398 aa		13.77	□□□□□ -0.21
RARA-209	ENST00000579727		R4GMQ9	66 aa		13.77	□□□□□ -0.21
RARA-209	ENST00000579727	MXRA5	Q9NR99	2828 aa		13.77	□□□□□ -0.21
RARA-209	ENST00000579727	ANK3	Q12955	4377 aa	Known RBP	13.76	□□□□□ -0.21
RARA-209	ENST00000579727		H3BSH0	61 aa		13.76	□□□□□ -0.21
RARA-209	ENST00000579727	MPZL2	O60487	215 aa		13.76	□□□□□ -0.21
RARA-209	ENST00000579727	GMDS	O60547	372 aa		13.76	□□□□□ -0.21
RARA-209	ENST00000579727	TGFA	P01135	160 aa		13.76	□□□□□ -0.21
RARA-209	ENST00000579727	IGHV2-70	P01814	119 aa		13.76	□□□□□ -0.21
RARA-209	ENST00000579727	TTR	P02766	147 aa		13.76	□□□□□ -0.21
RARA-209	ENST00000579727	GRP	P07492	148 aa		13.76	□□□□□ -0.21
RARA-209	ENST00000579727	CFL1	P23528	166 aa	Known RBP	13.76	□□□□□ -0.21
RARA-209	ENST00000579727	DCTD	P32321	178 aa		13.76	□□□□□ -0.21
RARA-209	ENST00000579727	DDOST	P39656	456 aa		13.76	□□□□□ -0.21
RARA-209	ENST00000579727	PSMB10	P40306	273 aa		13.76	□□□□□ -0.21
RARA-209	ENST00000579727	LMO4	P61968	165 aa		13.76	□□□□□ -0.21
RARA-209	ENST00000579727	SLC3A1	Q07837	685 aa		13.76	□□□□□ -0.21
RARA-209	ENST00000579727	OR8B8	Q15620	311 aa		13.76	□□□□□ -0.21
RARA-209	ENST00000579727	PEG10	Q86TG7	708 aa	Known RBP	13.76	□□□□□ -0.21
RARA-209	ENST00000579727	C19orf18	Q8NEA5	215 aa		13.76	□□□□□ -0.21
RARA-209	ENST00000579727	OR8S1	Q8NH09	359 aa		13.76	□□□□□ -0.21
RARA-209	ENST00000579727	CNIH3	Q8TBE1	160 aa		13.76	□□□□□ -0.21
RARA-209	ENST00000579727	SLC22A4	Q9H015	551 aa		13.76	□□□□□ -0.21
RARA-209	ENST00000579727	ZNF665	Q9H7R5	613 aa		13.76	□□□□□ -0.21
RARA-209	ENST00000579727	G6PC2	Q9NQR9	355 aa		13.76	□□□□□ -0.21
RARA-209	ENST00000579727	GPR84	Q9NQS5	396 aa		13.76	□□□□□ -0.21
RARA-209	ENST00000579727	ACOXL	Q9NUZ1	547 aa		13.76	□□□□□ -0.21
RARA-209	ENST00000579727	OR52A1	Q9UKL2	312 aa		13.76	□□□□□ -0.21
RARA-209	ENST00000579727	DAPL1	A0PJW8	107 aa		13.75	□□□□□ -0.21
RARA-209	ENST00000579727	METTL15	A6NJ78	407 aa		13.75	□□□□□ -0.21
RARA-209	ENST00000579727	ZNF850	A8MQ14	1090 aa		13.75	□□□□□ -0.21
RARA-209	ENST00000579727		A8MV72	311 aa	Predicted RBP	13.75	□□□□□ -0.21
RARA-209	ENST00000579727	TMEM178B	H3BS89	294 aa		13.75	□□□□□ -0.21
RARA-209	ENST00000579727	P2RY10	O00398	339 aa		13.75	□□□□□ -0.21
RARA-209	ENST00000579727	FAM20B	O75063	409 aa		13.75	□□□□□ -0.21
RARA-209	ENST00000579727	GNAL	P38405	381 aa		13.75	□□□□□ -0.21
RARA-209	ENST00000579727	SLC34A1	Q06495	639 aa		13.75	□□□□□ -0.21
RARA-209	ENST00000579727	PRDX4	Q13162	271 aa		13.75	□□□□□ -0.21
RARA-209	ENST00000579727	ZMYND11	Q15326	602 aa		13.75	□□□□□ -0.21
RARA-209	ENST00000579727	DMRTC1	Q5HYR2	192 aa		13.75	□□□□□ -0.21
RARA-209	ENST00000579727	ZNF684	Q5T5D7	378 aa		13.75	□□□□□ -0.21
RARA-209	ENST00000579727	ZNF691	Q5VV52	312 aa		13.75	□□□□□ -0.21
RARA-209	ENST00000579727	LIPN	Q5VXI9	398 aa		13.75	□□□□□ -0.21
RARA-209	ENST00000579727	IL17REL	Q6ZVW7	336 aa		13.75	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms