RNA–Protein interactions for RNA: ENST00000579558.5

SHMT1-206, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 2

Gene SHMT1, Length 1,077 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-206ENST00000579558 PPIAL4AQ9Y536 164 aa20.04■□□□□ 0.8
SHMT1-206ENST00000579558 WNK2Q9Y3S1 2297 aa20.04■□□□□ 0.8
SHMT1-206ENST00000579558 MXRA5Q9NR99 2828 aa20.03■□□□□ 0.8
SHMT1-206ENST00000579558 LOC105371242A0A075B767 164 aa20.03■□□□□ 0.8
SHMT1-206ENST00000579558 PTBP3O95758 552 aaKnown RBP20.03■□□□□ 0.8
SHMT1-206ENST00000579558 AVPP01185 164 aa20.03■□□□□ 0.8
SHMT1-206ENST00000579558 RPS2P15880 293 aaKnown RBP20.03■□□□□ 0.8
SHMT1-206ENST00000579558 GSK3AP49840 483 aa20.03■□□□□ 0.8
SHMT1-206ENST00000579558 MZT1Q08AG7 82 aa20.03■□□□□ 0.8
SHMT1-206ENST00000579558 ZNF404Q494X3 552 aa20.03■□□□□ 0.8
SHMT1-206ENST00000579558 NXNL2Q5VZ03 156 aa20.03■□□□□ 0.8
SHMT1-206ENST00000579558 KCTD18Q6PI47 426 aaPredicted RBP20.03■□□□□ 0.8
SHMT1-206ENST00000579558 C1orf229Q6ZS94 237 aaPredicted RBP20.03■□□□□ 0.8
SHMT1-206ENST00000579558 PLPP7Q8NBV4 271 aa20.03■□□□□ 0.8
SHMT1-206ENST00000579558 OR8S1Q8NH09 359 aa20.03■□□□□ 0.8
SHMT1-206ENST00000579558 IL4I1Q96RQ9 567 aa20.03■□□□□ 0.8
SHMT1-206ENST00000579558 CNN2Q99439 309 aaKnown RBP20.03■□□□□ 0.8
SHMT1-206ENST00000579558 TMEM246Q9BRR3 403 aa20.03■□□□□ 0.8
SHMT1-206ENST00000579558 C14orf119Q9NWQ9 140 aa20.03■□□□□ 0.8
SHMT1-206ENST00000579558 TMEM14AQ9Y6G1 99 aa20.03■□□□□ 0.8
SHMT1-206ENST00000579558 PPIAL4CA0A0B4J2A2 164 aa20.02■□□□□ 0.8
SHMT1-206ENST00000579558 PSMD9O00233 223 aa20.02■□□□□ 0.8
SHMT1-206ENST00000579558 FSTL3O95633 263 aa20.02■□□□□ 0.8
SHMT1-206ENST00000579558 GRPP07492 148 aa20.02■□□□□ 0.8
SHMT1-206ENST00000579558 WNT2P09544 360 aa20.02■□□□□ 0.8
SHMT1-206ENST00000579558 EFNB1P98172 346 aa20.02■□□□□ 0.8
SHMT1-206ENST00000579558 AADACL4Q5VUY2 407 aa20.02■□□□□ 0.8
SHMT1-206ENST00000579558 RFLNBQ8N5W9 214 aa20.02■□□□□ 0.8
SHMT1-206ENST00000579558 RIBC2Q9H4K1 309 aa20.02■□□□□ 0.8
SHMT1-206ENST00000579558 C7orf69Q9H7B7 122 aa20.02■□□□□ 0.8
SHMT1-206ENST00000579558 RNF7Q9UBF6 113 aa20.02■□□□□ 0.8
SHMT1-206ENST00000579558 MIOXQ9UGB7 285 aa20.02■□□□□ 0.8
SHMT1-206ENST00000579558 LRCH1Q9Y2L9 728 aa20.02■□□□□ 0.8
SHMT1-206ENST00000579558 SLC22A31A6NKX4 558 aa20.01■□□□□ 0.79
SHMT1-206ENST00000579558 A6NLC8 198 aa20.01■□□□□ 0.79
SHMT1-206ENST00000579558 A8MXK9 166 aa20.01■□□□□ 0.79
SHMT1-206ENST00000579558 EBAG9O00559 213 aa20.01■□□□□ 0.79
SHMT1-206ENST00000579558 CPT2P23786 658 aa20.01■□□□□ 0.79
SHMT1-206ENST00000579558 POLR2IP36954 125 aaKnown RBP20.01■□□□□ 0.79
SHMT1-206ENST00000579558 SRSF2Q01130 221 aaKnown RBP20.01■□□□□ 0.79
SHMT1-206ENST00000579558 DEGS2Q6QHC5 323 aa20.01■□□□□ 0.79
SHMT1-206ENST00000579558 C19orf18Q8NEA5 215 aa20.01■□□□□ 0.79
SHMT1-206ENST00000579558 CSNK2A3Q8NEV1 391 aa20.01■□□□□ 0.79
SHMT1-206ENST00000579558 OR8B12Q8NGG6 310 aa20.01■□□□□ 0.79
SHMT1-206ENST00000579558 ASB17Q8WXJ9 295 aa20.01■□□□□ 0.79
SHMT1-206ENST00000579558 PKP2Q99959 881 aa20.01■□□□□ 0.79
SHMT1-206ENST00000579558 RBM4BQ9BQ04 359 aaKnown RBP20.01■□□□□ 0.79
SHMT1-206ENST00000579558 PAPOLGQ9BWT3 736 aaKnown RBP20.01■□□□□ 0.79
SHMT1-206ENST00000579558 OSBPL10Q9BXB5 764 aa20.01■□□□□ 0.79
SHMT1-206ENST00000579558 GABARAPL3Q9BY60 117 aa20.01■□□□□ 0.79
SHMT1-206ENST00000579558 MROQ9BYG7 248 aa20.01■□□□□ 0.79
SHMT1-206ENST00000579558 TTTY10Q9BZA0 68 aa20.01■□□□□ 0.79
SHMT1-206ENST00000579558 C1orf123Q9NWV4 160 aa20.01■□□□□ 0.79
SHMT1-206ENST00000579558 COPS3Q9UNS2 423 aa20.01■□□□□ 0.79
SHMT1-206ENST00000579558 POLR3KQ9Y2Y1 108 aaPredicted RBP20.01■□□□□ 0.79
SHMT1-206ENST00000579558 GNALP38405 381 aa20■□□□□ 0.79
SHMT1-206ENST00000579558 SCGB2A2Q13296 93 aa20■□□□□ 0.79
SHMT1-206ENST00000579558 OR8B8Q15620 311 aa20■□□□□ 0.79
SHMT1-206ENST00000579558 SNCBQ16143 134 aa20■□□□□ 0.79
SHMT1-206ENST00000579558 ZFP1Q6P2D0 407 aa20■□□□□ 0.79
SHMT1-206ENST00000579558 C1QL2Q7Z5L3 287 aa20■□□□□ 0.79
SHMT1-206ENST00000579558 GID4Q8IVV7 300 aa20■□□□□ 0.79
SHMT1-206ENST00000579558 FTMTQ8N4E7 242 aa20■□□□□ 0.79
SHMT1-206ENST00000579558 BOLLQ8N9W6 283 aaKnown RBP20■□□□□ 0.79
SHMT1-206ENST00000579558 DEFB108BQ8NET1 73 aa20■□□□□ 0.79
SHMT1-206ENST00000579558 NEIL1Q96FI4 390 aaPredicted RBP20■□□□□ 0.79
SHMT1-206ENST00000579558 OR8B4Q96RC9 309 aa20■□□□□ 0.79
SHMT1-206ENST00000579558 SSBP3Q9BWW4 388 aaPredicted RBP20■□□□□ 0.79
SHMT1-206ENST00000579558 OCEL1Q9H607 264 aa20■□□□□ 0.79
SHMT1-206ENST00000579558 MMP26Q9NRE1 261 aa20■□□□□ 0.79
SHMT1-206ENST00000579558 OR5V1Q9UGF6 321 aa20■□□□□ 0.79
SHMT1-206ENST00000579558 RHBDD3Q9Y3P4 386 aa20■□□□□ 0.79
SHMT1-206ENST00000579558 PRR32B1ATL7 298 aa19.99■□□□□ 0.79
SHMT1-206ENST00000579558 H3BNX3 289 aa19.99■□□□□ 0.79
SHMT1-206ENST00000579558 TRAPPC2LH3BP13 241 aa19.99■□□□□ 0.79
SHMT1-206ENST00000579558 TCF21O43680 179 aa19.99■□□□□ 0.79
SHMT1-206ENST00000579558 ADRA2CP18825 462 aa19.99■□□□□ 0.79
SHMT1-206ENST00000579558 HOXA4Q00056 320 aaPredicted RBP19.99■□□□□ 0.79
SHMT1-206ENST00000579558 ROM1Q03395 351 aa19.99■□□□□ 0.79
SHMT1-206ENST00000579558 LIPNQ5VXI9 398 aa19.99■□□□□ 0.79
SHMT1-206ENST00000579558 DCDC5Q6ZRR9 648 aa19.99■□□□□ 0.79
SHMT1-206ENST00000579558 NLRC3Q7RTR2 1065 aa19.99■□□□□ 0.79
SHMT1-206ENST00000579558 PHC2Q8IXK0 858 aa19.99■□□□□ 0.79
SHMT1-206ENST00000579558 SLC35F2Q8IXU6 374 aa19.99■□□□□ 0.79
SHMT1-206ENST00000579558 ZNF679Q8IYX0 411 aa19.99■□□□□ 0.79
SHMT1-206ENST00000579558 OR8B3Q8NGG8 313 aa19.99■□□□□ 0.79
SHMT1-206ENST00000579558 LYZL4Q96KX0 146 aa19.99■□□□□ 0.79
SHMT1-206ENST00000579558 OR8B2Q96RD0 313 aa19.99■□□□□ 0.79
SHMT1-206ENST00000579558 ADGRL4Q9HBW9 690 aa19.99■□□□□ 0.79
SHMT1-206ENST00000579558 ZNF391Q9UJN7 358 aa19.99■□□□□ 0.79
SHMT1-206ENST00000579558 IKZF2Q9UKS7 526 aa19.99■□□□□ 0.79
SHMT1-206ENST00000579558 FBN3Q75N90 2809 aa19.98■□□□□ 0.79
SHMT1-206ENST00000579558 TMEM269A0A1B0GVZ9 245 aa19.98■□□□□ 0.79
SHMT1-206ENST00000579558 hCG_1807616A0A1W2PRN6 198 aa19.98■□□□□ 0.79
SHMT1-206ENST00000579558 ZNF254O75437 659 aa19.98■□□□□ 0.79
SHMT1-206ENST00000579558 CD80P33681 288 aa19.98■□□□□ 0.79
SHMT1-206ENST00000579558 RIDAP52758 137 aaKnown RBP19.98■□□□□ 0.79
SHMT1-206ENST00000579558 GNB2P62879 340 aa19.98■□□□□ 0.79
SHMT1-206ENST00000579558 KRTAP24-1Q3LI83 254 aa19.98■□□□□ 0.79
SHMT1-206ENST00000579558 ZNF826PQ6ZT77 177 aa19.98■□□□□ 0.79
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