RNA–Protein interactions for RNA: ENST00000578996.1

CDK5RAP3-211, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-211ENST00000578996 LCN8Q6JVE9 175 aa7.65□□□□□ -1.18
CDK5RAP3-211ENST00000578996 C16orf87Q6PH81 154 aa7.65□□□□□ -1.18
CDK5RAP3-211ENST00000578996 FAM57BQ71RH2 274 aa7.65□□□□□ -1.18
CDK5RAP3-211ENST00000578996 SLC16A9Q7RTY1 509 aa7.65□□□□□ -1.18
CDK5RAP3-211ENST00000578996 DPY19L4Q7Z388 723 aa7.65□□□□□ -1.18
CDK5RAP3-211ENST00000578996 PDZD9Q8IXQ8 264 aa7.65□□□□□ -1.18
CDK5RAP3-211ENST00000578996 GCSAMQ8N6F7 178 aa7.65□□□□□ -1.18
CDK5RAP3-211ENST00000578996 IQCF1Q8N6M8 205 aa7.65□□□□□ -1.18
CDK5RAP3-211ENST00000578996 PNLDC1Q8NA58 520 aaKnown RBP7.65□□□□□ -1.18
CDK5RAP3-211ENST00000578996 SPERTQ8NA61 448 aa7.65□□□□□ -1.18
CDK5RAP3-211ENST00000578996 ST8SIA4Q92187 359 aa7.65□□□□□ -1.18
CDK5RAP3-211ENST00000578996 DACT3Q96B18 629 aaPredicted RBP7.65□□□□□ -1.18
CDK5RAP3-211ENST00000578996 TMIGD2Q96BF3 282 aa7.65□□□□□ -1.18
CDK5RAP3-211ENST00000578996 CCDC124Q96CT7 223 aaKnown RBP7.65□□□□□ -1.18
CDK5RAP3-211ENST00000578996 INTS14Q96SY0 518 aa7.65□□□□□ -1.18
CDK5RAP3-211ENST00000578996 NIPSNAP1Q9BPW8 284 aa7.65□□□□□ -1.18
CDK5RAP3-211ENST00000578996 OR51V1Q9H2C8 321 aa7.65□□□□□ -1.18
CDK5RAP3-211ENST00000578996 MAGIXQ9H6Y5 334 aa7.65□□□□□ -1.18
CDK5RAP3-211ENST00000578996 WNK2Q9Y3S1 2297 aa7.64□□□□□ -1.19
CDK5RAP3-211ENST00000578996 FAM181BA6NEQ2 426 aa7.64□□□□□ -1.19
CDK5RAP3-211ENST00000578996 CLDN34H7C241 214 aa7.64□□□□□ -1.19
CDK5RAP3-211ENST00000578996 P2RY10O00398 339 aa7.64□□□□□ -1.19
CDK5RAP3-211ENST00000578996 GNGT2O14610 69 aa7.64□□□□□ -1.19
CDK5RAP3-211ENST00000578996 DVL1O14640 695 aa7.64□□□□□ -1.19
CDK5RAP3-211ENST00000578996 WIPF1O43516 503 aa7.64□□□□□ -1.19
CDK5RAP3-211ENST00000578996 NDUFA2O43678 99 aa7.64□□□□□ -1.19
CDK5RAP3-211ENST00000578996 CST1P01037 141 aa7.64□□□□□ -1.19
CDK5RAP3-211ENST00000578996 H2BFMP0C1H6 154 aa7.64□□□□□ -1.19
CDK5RAP3-211ENST00000578996 POU1F1P28069 291 aa7.64□□□□□ -1.19
CDK5RAP3-211ENST00000578996 GSTT1P30711 240 aa7.64□□□□□ -1.19
CDK5RAP3-211ENST00000578996 GRK5P34947 590 aa7.64□□□□□ -1.19
CDK5RAP3-211ENST00000578996 GNALP38405 381 aa7.64□□□□□ -1.19
CDK5RAP3-211ENST00000578996 DDOSTP39656 456 aa7.64□□□□□ -1.19
CDK5RAP3-211ENST00000578996 BLVRAP53004 296 aa7.64□□□□□ -1.19
CDK5RAP3-211ENST00000578996 ZNF121P58317 390 aaPredicted RBP7.64□□□□□ -1.19
CDK5RAP3-211ENST00000578996 ARF6P62330 175 aa7.64□□□□□ -1.19
CDK5RAP3-211ENST00000578996 CSNK2BP67870 215 aa7.64□□□□□ -1.19
CDK5RAP3-211ENST00000578996 FAM3AP98173 230 aa7.64□□□□□ -1.19
CDK5RAP3-211ENST00000578996 MS4A2Q01362 244 aa7.64□□□□□ -1.19
CDK5RAP3-211ENST00000578996 TRIM25Q14258 630 aaKnown RBP7.64□□□□□ -1.19
CDK5RAP3-211ENST00000578996 TEX30Q5JUR7 227 aa7.64□□□□□ -1.19
CDK5RAP3-211ENST00000578996 FIP1L1Q6UN15 594 aaKnown RBP7.64□□□□□ -1.19
CDK5RAP3-211ENST00000578996 KCTD8Q6ZWB6 473 aa7.64□□□□□ -1.19
CDK5RAP3-211ENST00000578996 BTN2A1Q7KYR7 527 aa7.64□□□□□ -1.19
CDK5RAP3-211ENST00000578996 FAM90A1Q86YD7 464 aa7.64□□□□□ -1.19
CDK5RAP3-211ENST00000578996 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.64□□□□□ -1.19
CDK5RAP3-211ENST00000578996 PLPP7Q8NBV4 271 aa7.64□□□□□ -1.19
CDK5RAP3-211ENST00000578996 SCCPDHQ8NBX0 429 aa7.64□□□□□ -1.19
CDK5RAP3-211ENST00000578996 LRRC29Q8WV35 223 aa7.64□□□□□ -1.19
CDK5RAP3-211ENST00000578996 GATAD2BQ8WXI9 593 aa7.64□□□□□ -1.19
CDK5RAP3-211ENST00000578996 LHX4Q969G2 390 aa7.64□□□□□ -1.19
CDK5RAP3-211ENST00000578996 PGAM5Q96HS1 289 aa7.64□□□□□ -1.19
CDK5RAP3-211ENST00000578996 NSL1Q96IY1 281 aa7.64□□□□□ -1.19
CDK5RAP3-211ENST00000578996 WDFY2Q96P53 400 aa7.64□□□□□ -1.19
CDK5RAP3-211ENST00000578996 TBX15Q96SF7 602 aa7.64□□□□□ -1.19
CDK5RAP3-211ENST00000578996 ABHD6Q9BV23 337 aa7.64□□□□□ -1.19
CDK5RAP3-211ENST00000578996 PAPOLGQ9BWT3 736 aaKnown RBP7.64□□□□□ -1.19
CDK5RAP3-211ENST00000578996 DGCR6LQ9BY27 220 aa7.64□□□□□ -1.19
CDK5RAP3-211ENST00000578996 NMNAT2Q9BZQ4 307 aa7.64□□□□□ -1.19
CDK5RAP3-211ENST00000578996 OR10A2Q9H208 303 aa7.64□□□□□ -1.19
CDK5RAP3-211ENST00000578996 MUC13Q9H3R2 512 aa7.64□□□□□ -1.19
CDK5RAP3-211ENST00000578996 TOR3AQ9H497 397 aa7.64□□□□□ -1.19
CDK5RAP3-211ENST00000578996 SP140LQ9H930 580 aa7.64□□□□□ -1.19
CDK5RAP3-211ENST00000578996 CMC2Q9NRP2 79 aa7.64□□□□□ -1.19
CDK5RAP3-211ENST00000578996 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.64□□□□□ -1.19
CDK5RAP3-211ENST00000578996 ONECUT1Q9UBC0 465 aa7.64□□□□□ -1.19
CDK5RAP3-211ENST00000578996 CENPVL3A0A0U1RRI6 287 aa7.63□□□□□ -1.19
CDK5RAP3-211ENST00000578996 A0A1B0GW55 424 aa7.63□□□□□ -1.19
CDK5RAP3-211ENST00000578996 POM121CA8CG34 1229 aa7.63□□□□□ -1.19
CDK5RAP3-211ENST00000578996 SRRM5B3KS81 715 aa7.63□□□□□ -1.19
CDK5RAP3-211ENST00000578996 PTBP3O95758 552 aaKnown RBP7.63□□□□□ -1.19
CDK5RAP3-211ENST00000578996 APOC1P02654 83 aa7.63□□□□□ -1.19
CDK5RAP3-211ENST00000578996 LIPFP07098 398 aa7.63□□□□□ -1.19
CDK5RAP3-211ENST00000578996 LYNP07948 512 aa7.63□□□□□ -1.19
CDK5RAP3-211ENST00000578996 DUX4L2P0CJ85 424 aa7.63□□□□□ -1.19
CDK5RAP3-211ENST00000578996 DUX4L3P0CJ86 424 aa7.63□□□□□ -1.19
CDK5RAP3-211ENST00000578996 DUX4L4P0CJ87 422 aa7.63□□□□□ -1.19
CDK5RAP3-211ENST00000578996 DUX4L5P0CJ88 424 aa7.63□□□□□ -1.19
CDK5RAP3-211ENST00000578996 DUX4L6P0CJ89 424 aa7.63□□□□□ -1.19
CDK5RAP3-211ENST00000578996 DUX4L7P0CJ90 424 aa7.63□□□□□ -1.19
CDK5RAP3-211ENST00000578996 RAP2AP10114 183 aa7.63□□□□□ -1.19
CDK5RAP3-211ENST00000578996 PAICSP22234 425 aaKnown RBP7.63□□□□□ -1.19
CDK5RAP3-211ENST00000578996 CALB2P22676 271 aa7.63□□□□□ -1.19
CDK5RAP3-211ENST00000578996 BPIFB3P59826 476 aa7.63□□□□□ -1.19
CDK5RAP3-211ENST00000578996 ELF3P78545 371 aaPredicted RBP7.63□□□□□ -1.19
CDK5RAP3-211ENST00000578996 IKZF1Q13422 519 aa7.63□□□□□ -1.19
CDK5RAP3-211ENST00000578996 PCK2Q16822 640 aa7.63□□□□□ -1.19
CDK5RAP3-211ENST00000578996 MICBQ29980 383 aa7.63□□□□□ -1.19
CDK5RAP3-211ENST00000578996 KLHL12Q53G59 568 aa7.63□□□□□ -1.19
CDK5RAP3-211ENST00000578996 PRR31Q5SQ13 230 aa7.63□□□□□ -1.19
CDK5RAP3-211ENST00000578996 LINC01590Q5TEZ4 76 aa7.63□□□□□ -1.19
CDK5RAP3-211ENST00000578996 DUX4L9Q6RFH8 374 aaPredicted RBP7.63□□□□□ -1.19
CDK5RAP3-211ENST00000578996 Q6YL49 198 aa7.63□□□□□ -1.19
CDK5RAP3-211ENST00000578996 C17orf107Q6ZR85 190 aa7.63□□□□□ -1.19
CDK5RAP3-211ENST00000578996 SHFQ7M4L6 423 aa7.63□□□□□ -1.19
CDK5RAP3-211ENST00000578996 WDR86Q86TI4 376 aa7.63□□□□□ -1.19
CDK5RAP3-211ENST00000578996 ARHGAP24Q8N264 748 aa7.63□□□□□ -1.19
CDK5RAP3-211ENST00000578996 FGFRL1Q8N441 504 aa7.63□□□□□ -1.19
CDK5RAP3-211ENST00000578996 KIR3DL3Q8N743 410 aa7.63□□□□□ -1.19
CDK5RAP3-211ENST00000578996 OR1M1Q8NGA1 313 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms