RNA–Protein interactions for RNA: ENST00000578773.1

GGA3-206, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 432 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-206ENST00000578773 PLPP7Q8NBV4 271 aa8.69□□□□□ -1.02
GGA3-206ENST00000578773 PAIP1Q9H074 479 aaKnown RBP8.69□□□□□ -1.02
GGA3-206ENST00000578773 VNN3Q9NY84 501 aa8.69□□□□□ -1.02
GGA3-206ENST00000578773 RPS6KA6Q9UK32 745 aa8.69□□□□□ -1.02
GGA3-206ENST00000578773 IGLV1-36A0A0B4J1U3 117 aa8.68□□□□□ -1.02
GGA3-206ENST00000578773 TRAPPC13A5PLN9 417 aa8.68□□□□□ -1.02
GGA3-206ENST00000578773 NPIPB13A6NJU9 1138 aa8.68□□□□□ -1.02
GGA3-206ENST00000578773 FAM90A22PA8MWA6 464 aa8.68□□□□□ -1.02
GGA3-206ENST00000578773 NPIPB4C9JG80 1138 aa8.68□□□□□ -1.02
GGA3-206ENST00000578773 LDLRAD4O15165 306 aa8.68□□□□□ -1.02
GGA3-206ENST00000578773 SIGLEC5O15389 551 aa8.68□□□□□ -1.02
GGA3-206ENST00000578773 MT-ND1P03886 318 aa8.68□□□□□ -1.02
GGA3-206ENST00000578773 SPNP16150 400 aa8.68□□□□□ -1.02
GGA3-206ENST00000578773 LBPP18428 481 aa8.68□□□□□ -1.02
GGA3-206ENST00000578773 GUCA1AP43080 201 aaPredicted RBP8.68□□□□□ -1.02
GGA3-206ENST00000578773 ENTPD1P49961 510 aa8.68□□□□□ -1.02
GGA3-206ENST00000578773 CTXN1P60606 82 aa8.68□□□□□ -1.02
GGA3-206ENST00000578773 HIST1H3AP68431 136 aa8.68□□□□□ -1.02
GGA3-206ENST00000578773 CDK6Q00534 326 aa8.68□□□□□ -1.02
GGA3-206ENST00000578773 FHL1Q13642 323 aa8.68□□□□□ -1.02
GGA3-206ENST00000578773 ZNF273Q14593 569 aa8.68□□□□□ -1.02
GGA3-206ENST00000578773 MESTQ5EB52 335 aa8.68□□□□□ -1.02
GGA3-206ENST00000578773 HIST2H3PS2Q5TEC6 136 aa8.68□□□□□ -1.02
GGA3-206ENST00000578773 REEP3Q6NUK4 255 aa8.68□□□□□ -1.02
GGA3-206ENST00000578773 SLC2A7Q6PXP3 512 aa8.68□□□□□ -1.02
GGA3-206ENST00000578773 CFAP77Q6ZQR2 320 aa8.68□□□□□ -1.02
GGA3-206ENST00000578773 HIST2H3AQ71DI3 136 aa8.68□□□□□ -1.02
GGA3-206ENST00000578773 MRPL21Q7Z2W9 205 aaKnown RBP8.68□□□□□ -1.02
GGA3-206ENST00000578773 ZNF695Q8IW36 515 aa8.68□□□□□ -1.02
GGA3-206ENST00000578773 OR1M1Q8NGA1 313 aa8.68□□□□□ -1.02
GGA3-206ENST00000578773 OR5M8Q8NGP6 311 aa8.68□□□□□ -1.02
GGA3-206ENST00000578773 ANGPTL6Q8NI99 470 aa8.68□□□□□ -1.02
GGA3-206ENST00000578773 SGTBQ96EQ0 304 aa8.68□□□□□ -1.02
GGA3-206ENST00000578773 RAB3IPQ96QF0 476 aaPredicted RBP8.68□□□□□ -1.02
GGA3-206ENST00000578773 FAM110AQ9BQ89 295 aa8.68□□□□□ -1.02
GGA3-206ENST00000578773 IKZF5Q9H5V7 419 aa8.68□□□□□ -1.02
GGA3-206ENST00000578773 RERGLQ9H628 205 aa8.68□□□□□ -1.02
GGA3-206ENST00000578773 HAO2Q9NYQ3 351 aa8.68□□□□□ -1.02
GGA3-206ENST00000578773 SLC25A37Q9NYZ2 338 aa8.68□□□□□ -1.02
GGA3-206ENST00000578773 STX18Q9P2W9 335 aaKnown RBP8.68□□□□□ -1.02
GGA3-206ENST00000578773 SLC13A4Q9UKG4 626 aa8.68□□□□□ -1.02
GGA3-206ENST00000578773 COA3Q9Y2R0 106 aaPredicted RBP8.68□□□□□ -1.02
GGA3-206ENST00000578773 ADAM18Q9Y3Q7 739 aa8.68□□□□□ -1.02
GGA3-206ENST00000578773 F5H5K5 113 aa8.67□□□□□ -1.02
GGA3-206ENST00000578773 CLIC1O00299 241 aa8.67□□□□□ -1.02
GGA3-206ENST00000578773 SLC25A17O43808 307 aa8.67□□□□□ -1.02
GGA3-206ENST00000578773 SPAG7O75391 227 aa8.67□□□□□ -1.02
GGA3-206ENST00000578773 LCATP04180 440 aa8.67□□□□□ -1.02
GGA3-206ENST00000578773 OR3A4PP47883 348 aa8.67□□□□□ -1.02
GGA3-206ENST00000578773 CAV3P56539 151 aa8.67□□□□□ -1.02
GGA3-206ENST00000578773 SLC34A1Q06495 639 aa8.67□□□□□ -1.02
GGA3-206ENST00000578773 SRSF7Q16629 238 aaKnown RBP eCLIP8.67□□□□□ -1.02
GGA3-206ENST00000578773 C6orf10Q5SRN2 563 aa8.67□□□□□ -1.02
GGA3-206ENST00000578773 GCNT6Q5T4J0 391 aa8.67□□□□□ -1.02
GGA3-206ENST00000578773 TMEM200BQ69YZ2 307 aa8.67□□□□□ -1.02
GGA3-206ENST00000578773 DPY19L4Q7Z388 723 aa8.67□□□□□ -1.02
GGA3-206ENST00000578773 ARMC8Q8IUR7 673 aa8.67□□□□□ -1.02
GGA3-206ENST00000578773 DPP10Q8N608 796 aa8.67□□□□□ -1.02
GGA3-206ENST00000578773 TMEM185AQ8NFB2 350 aa8.67□□□□□ -1.02
GGA3-206ENST00000578773 SLC26A10Q8NG04 563 aa8.67□□□□□ -1.02
GGA3-206ENST00000578773 OR4M1Q8NGD0 313 aa8.67□□□□□ -1.02
GGA3-206ENST00000578773 OR56B2PQ8NGI1 322 aa8.67□□□□□ -1.02
GGA3-206ENST00000578773 OR9I1Q8NGQ6 314 aa8.67□□□□□ -1.02
GGA3-206ENST00000578773 OR5K1Q8NHB7 308 aa8.67□□□□□ -1.02
GGA3-206ENST00000578773 EPS8L3Q8TE67 593 aaKnown RBP8.67□□□□□ -1.02
GGA3-206ENST00000578773 COQ7Q99807 217 aa8.67□□□□□ -1.02
GGA3-206ENST00000578773 HEXA-AS1Q9H8Q6 139 aa8.67□□□□□ -1.02
GGA3-206ENST00000578773 RNPEPL1Q9HAU8 725 aa8.67□□□□□ -1.02
GGA3-206ENST00000578773 LYVE1Q9Y5Y7 322 aa8.67□□□□□ -1.02
GGA3-206ENST00000578773 IGKV1D-17A0A075B6S4 117 aa8.66□□□□□ -1.02
GGA3-206ENST00000578773 TRAV27A0A087WT01 109 aa8.66□□□□□ -1.02
GGA3-206ENST00000578773 TEX13CA0A0J9YWL9 993 aa8.66□□□□□ -1.02
GGA3-206ENST00000578773 CDIPTO14735 213 aa8.66□□□□□ -1.02
GGA3-206ENST00000578773 AKR7A2O43488 359 aa8.66□□□□□ -1.02
GGA3-206ENST00000578773 ACAA1P09110 424 aaPredicted RBP8.66□□□□□ -1.02
GGA3-206ENST00000578773 NR2C1P13056 603 aa8.66□□□□□ -1.02
GGA3-206ENST00000578773 GGT2P36268 569 aa8.66□□□□□ -1.02
GGA3-206ENST00000578773 GABRA2P47869 451 aa8.66□□□□□ -1.02
GGA3-206ENST00000578773 DYNLT3P51808 116 aa8.66□□□□□ -1.02
GGA3-206ENST00000578773 SLC25A1P53007 311 aa8.66□□□□□ -1.02
GGA3-206ENST00000578773 DLX6P56179 175 aa8.66□□□□□ -1.02
GGA3-206ENST00000578773 SCARB2Q14108 478 aa8.66□□□□□ -1.02
GGA3-206ENST00000578773 GLYATL3Q5SZD4 288 aa8.66□□□□□ -1.02
GGA3-206ENST00000578773 ZNF572Q7Z3I7 529 aaPredicted RBP8.66□□□□□ -1.02
GGA3-206ENST00000578773 LINC00346Q8IVM7 164 aa8.66□□□□□ -1.02
GGA3-206ENST00000578773 OR4Q3Q8NH05 313 aa8.66□□□□□ -1.02
GGA3-206ENST00000578773 FOXRED1Q96CU9 486 aaPredicted RBP8.66□□□□□ -1.02
GGA3-206ENST00000578773 MALSU1Q96EH3 234 aa8.66□□□□□ -1.02
GGA3-206ENST00000578773 RNFT2Q96EX2 444 aa8.66□□□□□ -1.02
GGA3-206ENST00000578773 PKNOX2Q96KN3 472 aa8.66□□□□□ -1.02
GGA3-206ENST00000578773 NABP2Q9BQ15 211 aa8.66□□□□□ -1.02
GGA3-206ENST00000578773 SLC25A33Q9BSK2 321 aa8.66□□□□□ -1.02
GGA3-206ENST00000578773 WACQ9BTA9 647 aa8.66□□□□□ -1.02
GGA3-206ENST00000578773 SPATA5L1Q9BVQ7 753 aa8.66□□□□□ -1.02
GGA3-206ENST00000578773 FGF23Q9GZV9 251 aaPredicted RBP8.66□□□□□ -1.02
GGA3-206ENST00000578773 THUMPD1Q9NXG2 353 aaKnown RBP8.66□□□□□ -1.02
GGA3-206ENST00000578773 SLAMF8Q9P0V8 285 aa8.66□□□□□ -1.02
GGA3-206ENST00000578773 ATPIF1Q9UII2 106 aa8.66□□□□□ -1.02
GGA3-206ENST00000578773 GGT3PA6NGU5 568 aa8.65□□□□□ -1.02
GGA3-206ENST00000578773 BHLHE40O14503 412 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms