RNA–Protein interactions for RNA: ENST00000578595.1

SS18-209, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 406 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-209ENST00000578595 MZT1Q08AG7 82 aa16.43■□□□□ 0.22
SS18-209ENST00000578595 CR1LQ2VPA4 569 aa16.43■□□□□ 0.22
SS18-209ENST00000578595 PLEKHG7Q6ZR37 379 aa16.43■□□□□ 0.22
SS18-209ENST00000578595 PRSS45Q7RTY3 260 aa16.43■□□□□ 0.22
SS18-209ENST00000578595 FTMTQ8N4E7 242 aa16.43■□□□□ 0.22
SS18-209ENST00000578595 KLHL36Q8N4N3 616 aa16.43■□□□□ 0.22
SS18-209ENST00000578595 SPICQ8N5J4 248 aa16.43■□□□□ 0.22
SS18-209ENST00000578595 MBOAT4Q96T53 435 aa16.43■□□□□ 0.22
SS18-209ENST00000578595 MNTQ99583 582 aa16.43■□□□□ 0.22
SS18-209ENST00000578595 RGCCQ9H4X1 137 aa16.43■□□□□ 0.22
SS18-209ENST00000578595 FN3KRPQ9HA64 309 aa16.43■□□□□ 0.22
SS18-209ENST00000578595 ZNF319Q9P2F9 582 aa16.43■□□□□ 0.22
SS18-209ENST00000578595 LPAR3Q9UBY5 353 aa16.43■□□□□ 0.22
SS18-209ENST00000578595 hCG_1807616A0A1W2PRN6 198 aa16.42■□□□□ 0.22
SS18-209ENST00000578595 PRR32B1ATL7 298 aa16.42■□□□□ 0.22
SS18-209ENST00000578595 MAGEB4O15481 346 aaPredicted RBP16.42■□□□□ 0.22
SS18-209ENST00000578595 ZNF254O75437 659 aa16.42■□□□□ 0.22
SS18-209ENST00000578595 IGHV2-70P01814 119 aa16.42■□□□□ 0.22
SS18-209ENST00000578595 KRT8P05787 483 aa16.42■□□□□ 0.22
SS18-209ENST00000578595 PCMT1P22061 227 aa16.42■□□□□ 0.22
SS18-209ENST00000578595 MAB21L1Q13394 359 aa16.42■□□□□ 0.22
SS18-209ENST00000578595 ZMYND11Q15326 602 aa16.42■□□□□ 0.22
SS18-209ENST00000578595 FAM120AOSQ5T036 256 aa16.42■□□□□ 0.22
SS18-209ENST00000578595 DEGS2Q6QHC5 323 aa16.42■□□□□ 0.22
SS18-209ENST00000578595 YIPF7Q8N8F6 280 aa16.42■□□□□ 0.22
SS18-209ENST00000578595 CSNK2A3Q8NEV1 391 aa16.42■□□□□ 0.22
SS18-209ENST00000578595 TMEM186Q96B77 213 aa16.42■□□□□ 0.22
SS18-209ENST00000578595 HRASLS5Q96KN8 279 aa16.42■□□□□ 0.22
SS18-209ENST00000578595 SLC29A1Q99808 456 aa16.42■□□□□ 0.22
SS18-209ENST00000578595 APOL4Q9BPW4 351 aa16.42■□□□□ 0.22
SS18-209ENST00000578595 C14orf119Q9NWQ9 140 aa16.42■□□□□ 0.22
SS18-209ENST00000578595 HIF1ANQ9NWT6 349 aa16.42■□□□□ 0.22
SS18-209ENST00000578595 ANXA2P2A6NMY6 339 aa16.41■□□□□ 0.22
SS18-209ENST00000578595 LOC110117498-PIK3R3F6TDL0 507 aa16.41■□□□□ 0.22
SS18-209ENST00000578595 FAM20BO75063 409 aa16.41■□□□□ 0.22
SS18-209ENST00000578595 RPP14O95059 124 aaKnown RBP16.41■□□□□ 0.22
SS18-209ENST00000578595 MDH2P40926 338 aaKnown RBP16.41■□□□□ 0.22
SS18-209ENST00000578595 DVL1P1P54792 670 aaPredicted RBP16.41■□□□□ 0.22
SS18-209ENST00000578595 ROM1Q03395 351 aa16.41■□□□□ 0.22
SS18-209ENST00000578595 RCN1Q15293 331 aa16.41■□□□□ 0.22
SS18-209ENST00000578595 MPPED2Q15777 294 aa16.41■□□□□ 0.22
SS18-209ENST00000578595 SNCBQ16143 134 aa16.41■□□□□ 0.22
SS18-209ENST00000578595 LRRC36Q1X8D7 754 aa16.41■□□□□ 0.22
SS18-209ENST00000578595 BCL2L15Q5TBC7 163 aa16.41■□□□□ 0.22
SS18-209ENST00000578595 MUC20Q8N307 709 aaPredicted RBP16.41■□□□□ 0.22
SS18-209ENST00000578595 CELF2-AS1Q8N7Q2 184 aa16.41■□□□□ 0.22
SS18-209ENST00000578595 SPERTQ8NA61 448 aa16.41■□□□□ 0.22
SS18-209ENST00000578595 UBE2FQ969M7 185 aa16.41■□□□□ 0.22
SS18-209ENST00000578595 FAM71F1Q96KD3 344 aaPredicted RBP16.41■□□□□ 0.22
SS18-209ENST00000578595 SIGLEC11Q96RL6 698 aa16.41■□□□□ 0.22
SS18-209ENST00000578595 PBOV1Q9GZY1 135 aa16.41■□□□□ 0.22
SS18-209ENST00000578595 TMEM160Q9NX00 188 aa16.41■□□□□ 0.22
SS18-209ENST00000578595 FAM206AQ9NX38 181 aa16.41■□□□□ 0.22
SS18-209ENST00000578595 HAO2Q9NYQ3 351 aa16.41■□□□□ 0.22
SS18-209ENST00000578595 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.41■□□□□ 0.22
SS18-209ENST00000578595 SRD5A1P18405 259 aa16.4■□□□□ 0.22
SS18-209ENST00000578595 SRP14P37108 136 aaKnown RBP16.4■□□□□ 0.22
SS18-209ENST00000578595 LCN2P80188 198 aa16.4■□□□□ 0.22
SS18-209ENST00000578595 MFGE8Q08431 387 aaPredicted RBP16.4■□□□□ 0.22
SS18-209ENST00000578595 FAM201AQ5SY85 155 aa16.4■□□□□ 0.22
SS18-209ENST00000578595 FAHD2BQ6P2I3 314 aaPredicted RBP16.4■□□□□ 0.22
SS18-209ENST00000578595 KCTD8Q6ZWB6 473 aa16.4■□□□□ 0.22
SS18-209ENST00000578595 KLBQ86Z14 1044 aa16.4■□□□□ 0.22
SS18-209ENST00000578595 GALNT4Q8N4A0 578 aa16.4■□□□□ 0.22
SS18-209ENST00000578595 C19orf18Q8NEA5 215 aa16.4■□□□□ 0.22
SS18-209ENST00000578595 TRUB1Q8WWH5 349 aaKnown RBP16.4■□□□□ 0.22
SS18-209ENST00000578595 PIGCQ92535 297 aa16.4■□□□□ 0.22
SS18-209ENST00000578595 FAHD2AQ96GK7 314 aa16.4■□□□□ 0.22
SS18-209ENST00000578595 C1orf159Q96HA4 380 aa16.4■□□□□ 0.22
SS18-209ENST00000578595 C1orf123Q9NWV4 160 aa16.4■□□□□ 0.22
SS18-209ENST00000578595 ZNF391Q9UJN7 358 aa16.4■□□□□ 0.22
SS18-209ENST00000578595 PPIAL4EA0A075B759 164 aa16.39■□□□□ 0.21
SS18-209ENST00000578595 TRAV20A0A0B4J274 112 aa16.39■□□□□ 0.21
SS18-209ENST00000578595 A0A1W2PQL4 384 aaPredicted RBP16.39■□□□□ 0.21
SS18-209ENST00000578595 SNTNA6NMZ2 147 aa16.39■□□□□ 0.21
SS18-209ENST00000578595 PPIAL4DF5H284 164 aa16.39■□□□□ 0.21
SS18-209ENST00000578595 ENTPD6O75354 484 aa16.39■□□□□ 0.21
SS18-209ENST00000578595 OR2T7P0C7T2 308 aa16.39■□□□□ 0.21
SS18-209ENST00000578595 PPIAL4FP0DN26 164 aa16.39■□□□□ 0.21
SS18-209ENST00000578595 RPS2P15880 293 aaKnown RBP16.39■□□□□ 0.21
SS18-209ENST00000578595 GATA4P43694 442 aa16.39■□□□□ 0.21
SS18-209ENST00000578595 TMEM155Q4W5P6 130 aa16.39■□□□□ 0.21
SS18-209ENST00000578595 SSX6Q7RTT6 188 aa16.39■□□□□ 0.21
SS18-209ENST00000578595 FAM220AQ7Z4H9 259 aa16.39■□□□□ 0.21
SS18-209ENST00000578595 THAP5Q7Z6K1 395 aa16.39■□□□□ 0.21
SS18-209ENST00000578595 ZNF555Q8NEP9 628 aa16.39■□□□□ 0.21
SS18-209ENST00000578595 OR2T27Q8NH04 317 aa16.39■□□□□ 0.21
SS18-209ENST00000578595 OR51E1Q8TCB6 317 aa16.39■□□□□ 0.21
SS18-209ENST00000578595 ERGIC1Q969X5 290 aa16.39■□□□□ 0.21
SS18-209ENST00000578595 RNFT2Q96EX2 444 aa16.39■□□□□ 0.21
SS18-209ENST00000578595 LYZL4Q96KX0 146 aa16.39■□□□□ 0.21
SS18-209ENST00000578595 MICU1Q9BPX6 476 aa16.39■□□□□ 0.21
SS18-209ENST00000578595 MOB1AQ9H8S9 216 aa16.39■□□□□ 0.21
SS18-209ENST00000578595 GPR84Q9NQS5 396 aa16.39■□□□□ 0.21
SS18-209ENST00000578595 AASSQ9UDR5 926 aa16.39■□□□□ 0.21
SS18-209ENST00000578595 RHBDD3Q9Y3P4 386 aa16.39■□□□□ 0.21
SS18-209ENST00000578595 PPIAL4AQ9Y536 164 aa16.39■□□□□ 0.21
SS18-209ENST00000578595 A0A1B0GWJ7 208 aa16.38■□□□□ 0.21
SS18-209ENST00000578595 ERICH4A6NGS2 130 aa16.38■□□□□ 0.21
SS18-209ENST00000578595 ZNF850A8MQ14 1090 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms