RNA–Protein interactions for RNA: ENST00000577228.1

CDH8-202, Transcript of cadherin 8, humanhuman

TSL 4

Gene CDH8, Length 539 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-202ENST00000577228 SEMA6AQ9H2E6 1030 aa9.72□□□□□ -0.85
CDH8-202ENST00000577228 OPA3Q9H6K4 179 aa9.72□□□□□ -0.85
CDH8-202ENST00000577228 ZNRD1Q9P1U0 126 aa9.72□□□□□ -0.85
CDH8-202ENST00000577228 ABCD2Q9UBJ2 740 aa9.72□□□□□ -0.85
CDH8-202ENST00000577228 VPREB3Q9UKI3 123 aa9.72□□□□□ -0.85
CDH8-202ENST00000577228 N6AMT1Q9Y5N5 214 aa9.72□□□□□ -0.85
CDH8-202ENST00000577228 ZNF816-ZNF321PA0A0X1KG74 233 aa9.71□□□□□ -0.86
CDH8-202ENST00000577228 A0A1B0GW55 424 aa9.71□□□□□ -0.86
CDH8-202ENST00000577228 ANKRD30BLA7E2S9 258 aa9.71□□□□□ -0.86
CDH8-202ENST00000577228 XRCC2O43543 280 aa9.71□□□□□ -0.86
CDH8-202ENST00000577228 CCDC22O60826 627 aa9.71□□□□□ -0.86
CDH8-202ENST00000577228 TSPAN9O75954 239 aa9.71□□□□□ -0.86
CDH8-202ENST00000577228 CSF1P09603 554 aa9.71□□□□□ -0.86
CDH8-202ENST00000577228 DUX4L2P0CJ85 424 aa9.71□□□□□ -0.86
CDH8-202ENST00000577228 DUX4L3P0CJ86 424 aa9.71□□□□□ -0.86
CDH8-202ENST00000577228 DUX4L4P0CJ87 422 aa9.71□□□□□ -0.86
CDH8-202ENST00000577228 DUX4L5P0CJ88 424 aa9.71□□□□□ -0.86
CDH8-202ENST00000577228 DUX4L6P0CJ89 424 aa9.71□□□□□ -0.86
CDH8-202ENST00000577228 DUX4L7P0CJ90 424 aa9.71□□□□□ -0.86
CDH8-202ENST00000577228 SLC2A1P11166 492 aa9.71□□□□□ -0.86
CDH8-202ENST00000577228 MUC1P15941 1255 aaPredicted RBP9.71□□□□□ -0.86
CDH8-202ENST00000577228 EEF1B2P24534 225 aaKnown RBP9.71□□□□□ -0.86
CDH8-202ENST00000577228 DDOSTP39656 456 aa9.71□□□□□ -0.86
CDH8-202ENST00000577228 GSSP48637 474 aa9.71□□□□□ -0.86
CDH8-202ENST00000577228 PSME3P61289 254 aa9.71□□□□□ -0.86
CDH8-202ENST00000577228 ELF3P78545 371 aaPredicted RBP9.71□□□□□ -0.86
CDH8-202ENST00000577228 GUCA2AQ02747 115 aa9.71□□□□□ -0.86
CDH8-202ENST00000577228 EGR3Q06889 387 aa9.71□□□□□ -0.86
CDH8-202ENST00000577228 TAF13Q15543 124 aa9.71□□□□□ -0.86
CDH8-202ENST00000577228 WDR38Q5JTN6 314 aa9.71□□□□□ -0.86
CDH8-202ENST00000577228 DUX4L9Q6RFH8 374 aaPredicted RBP9.71□□□□□ -0.86
CDH8-202ENST00000577228 LYPD4Q6UWN0 246 aa9.71□□□□□ -0.86
CDH8-202ENST00000577228 SLC36A1Q7Z2H8 476 aa9.71□□□□□ -0.86
CDH8-202ENST00000577228 DCXRQ7Z4W1 244 aa9.71□□□□□ -0.86
CDH8-202ENST00000577228 ZDHHC21Q8IVQ6 265 aa9.71□□□□□ -0.86
CDH8-202ENST00000577228 FAM216BQ8N7L0 139 aa9.71□□□□□ -0.86
CDH8-202ENST00000577228 CYB561A3Q8NBI2 242 aa9.71□□□□□ -0.86
CDH8-202ENST00000577228 LY6G5BQ8NDX9 201 aa9.71□□□□□ -0.86
CDH8-202ENST00000577228 OR2T4Q8NH00 348 aa9.71□□□□□ -0.86
CDH8-202ENST00000577228 NPRL2Q8WTW4 380 aa9.71□□□□□ -0.86
CDH8-202ENST00000577228 RNPEPL1Q9HAU8 725 aa9.71□□□□□ -0.86
CDH8-202ENST00000577228 SIRT7Q9NRC8 400 aa9.71□□□□□ -0.86
CDH8-202ENST00000577228 CENPMQ9NSP4 180 aa9.71□□□□□ -0.86
CDH8-202ENST00000577228 ADA2Q9NZK5 511 aa9.71□□□□□ -0.86
CDH8-202ENST00000577228 DUX4Q9UBX2 424 aa9.71□□□□□ -0.86
CDH8-202ENST00000577228 A0A1W2PRD5 423 aa9.7□□□□□ -0.86
CDH8-202ENST00000577228 A0A1W2PRF3 423 aa9.7□□□□□ -0.86
CDH8-202ENST00000577228 A0A1W2PRM7 423 aa9.7□□□□□ -0.86
CDH8-202ENST00000577228 NPFFO15130 113 aa9.7□□□□□ -0.86
CDH8-202ENST00000577228 TBX1O43435 398 aa9.7□□□□□ -0.86
CDH8-202ENST00000577228 NDUFB3O43676 98 aa9.7□□□□□ -0.86
CDH8-202ENST00000577228 PAHP00439 452 aa9.7□□□□□ -0.86
CDH8-202ENST00000577228 SPARCP09486 303 aa9.7□□□□□ -0.86
CDH8-202ENST00000577228 PSKH1P11801 424 aa9.7□□□□□ -0.86
CDH8-202ENST00000577228 TGFBR2P37173 567 aa9.7□□□□□ -0.86
CDH8-202ENST00000577228 PRB3Q04118 309 aaPredicted RBP9.7□□□□□ -0.86
CDH8-202ENST00000577228 TSPAN31Q12999 210 aa9.7□□□□□ -0.86
CDH8-202ENST00000577228 IKZF1Q13422 519 aa9.7□□□□□ -0.86
CDH8-202ENST00000577228 METAP1DQ6UB28 335 aaPredicted RBP9.7□□□□□ -0.86
CDH8-202ENST00000577228 DPY19L4Q7Z388 723 aa9.7□□□□□ -0.86
CDH8-202ENST00000577228 WDR86Q86TI4 376 aa9.7□□□□□ -0.86
CDH8-202ENST00000577228 C11orf53Q8IXP5 236 aa9.7□□□□□ -0.86
CDH8-202ENST00000577228 OR52L1Q8NGH7 329 aa9.7□□□□□ -0.86
CDH8-202ENST00000577228 OR51L1Q8NGJ5 315 aa9.7□□□□□ -0.86
CDH8-202ENST00000577228 GNPDA2Q8TDQ7 276 aa9.7□□□□□ -0.86
CDH8-202ENST00000577228 SPSB4Q96A44 273 aa9.7□□□□□ -0.86
CDH8-202ENST00000577228 MCUR1Q96AQ8 359 aa9.7□□□□□ -0.86
CDH8-202ENST00000577228 SLAMF6Q96DU3 332 aa9.7□□□□□ -0.86
CDH8-202ENST00000577228 PYURFQ96I23 114 aa9.7□□□□□ -0.86
CDH8-202ENST00000577228 DMRTB1Q96MA1 342 aa9.7□□□□□ -0.86
CDH8-202ENST00000577228 KCNJ15Q99712 375 aa9.7□□□□□ -0.86
CDH8-202ENST00000577228 SPAG4Q9NPE6 437 aa9.7□□□□□ -0.86
CDH8-202ENST00000577228 DNAJB11Q9UBS4 358 aa9.7□□□□□ -0.86
CDH8-202ENST00000577228 CDH10Q9Y6N8 788 aa9.7□□□□□ -0.86
CDH8-202ENST00000577228 COMMD3-BMI1R4GMX3 469 aa9.7□□□□□ -0.86
CDH8-202ENST00000577228 ANKRD61A6NGH8 418 aa9.69□□□□□ -0.86
CDH8-202ENST00000577228 ZNF878C9JN71 531 aa9.69□□□□□ -0.86
CDH8-202ENST00000577228 RNASEK-C17orf49H0YIS7 233 aa9.69□□□□□ -0.86
CDH8-202ENST00000577228 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.69□□□□□ -0.86
CDH8-202ENST00000577228 ACOT8O14734 319 aa9.69□□□□□ -0.86
CDH8-202ENST00000577228 GPR37O15354 613 aa9.69□□□□□ -0.86
CDH8-202ENST00000577228 TIPRLO75663 272 aa9.69□□□□□ -0.86
CDH8-202ENST00000577228 SEMG1P04279 462 aa9.69□□□□□ -0.86
CDH8-202ENST00000577228 RRM2P31350 389 aa9.69□□□□□ -0.86
CDH8-202ENST00000577228 NAA10P41227 235 aaPredicted RBP9.69□□□□□ -0.86
CDH8-202ENST00000577228 ENTPD1P49961 510 aa9.69□□□□□ -0.86
CDH8-202ENST00000577228 CSNK2BP67870 215 aa9.69□□□□□ -0.86
CDH8-202ENST00000577228 KLRD1Q13241 179 aa9.69□□□□□ -0.86
CDH8-202ENST00000577228 TIGD6Q17RP2 521 aa9.69□□□□□ -0.86
CDH8-202ENST00000577228 LRRC10Q5BKY1 277 aa9.69□□□□□ -0.86
CDH8-202ENST00000577228 RPL13AP3Q6NVV1 102 aa9.69□□□□□ -0.86
CDH8-202ENST00000577228 PGBD2Q6P3X8 592 aa9.69□□□□□ -0.86
CDH8-202ENST00000577228 WDR82Q6UXN9 313 aa9.69□□□□□ -0.86
CDH8-202ENST00000577228 SLC16A9Q7RTY1 509 aa9.69□□□□□ -0.86
CDH8-202ENST00000577228 GALNT4Q8N4A0 578 aa9.69□□□□□ -0.86
CDH8-202ENST00000577228 RNF148Q8N7C7 305 aa9.69□□□□□ -0.86
CDH8-202ENST00000577228 OR1M1Q8NGA1 313 aa9.69□□□□□ -0.86
CDH8-202ENST00000577228 OR9Q1Q8NGQ5 310 aa9.69□□□□□ -0.86
CDH8-202ENST00000577228 OR5R1Q8NH85 324 aa9.69□□□□□ -0.86
CDH8-202ENST00000577228 ZNRF4Q8WWF5 429 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms