RNA–Protein interactions for RNA: ENST00000576613.5

CTDNEP1-212, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-212ENST00000576613 MAP6Q96JE9 813 aa9.54□□□□□ -0.88
CTDNEP1-212ENST00000576613 RAB18Q9NP72 206 aa9.54□□□□□ -0.88
CTDNEP1-212ENST00000576613 CMTM6Q9NX76 183 aa9.54□□□□□ -0.88
CTDNEP1-212ENST00000576613 DNAJB11Q9UBS4 358 aa9.54□□□□□ -0.88
CTDNEP1-212ENST00000576613 TRBV4-1A0A0J9YWV2 114 aa9.53□□□□□ -0.88
CTDNEP1-212ENST00000576613 A0A1B0GW55 424 aa9.53□□□□□ -0.88
CTDNEP1-212ENST00000576613 HMGB1P1B2RPK0 211 aaPredicted RBP9.53□□□□□ -0.88
CTDNEP1-212ENST00000576613 H3BUX3 64 aa9.53□□□□□ -0.88
CTDNEP1-212ENST00000576613 XRCC2O43543 280 aa9.53□□□□□ -0.88
CTDNEP1-212ENST00000576613 TIPRLO75663 272 aa9.53□□□□□ -0.88
CTDNEP1-212ENST00000576613 DUX4L2P0CJ85 424 aa9.53□□□□□ -0.88
CTDNEP1-212ENST00000576613 DUX4L3P0CJ86 424 aa9.53□□□□□ -0.88
CTDNEP1-212ENST00000576613 DUX4L4P0CJ87 422 aa9.53□□□□□ -0.88
CTDNEP1-212ENST00000576613 DUX4L5P0CJ88 424 aa9.53□□□□□ -0.88
CTDNEP1-212ENST00000576613 DUX4L6P0CJ89 424 aa9.53□□□□□ -0.88
CTDNEP1-212ENST00000576613 DUX4L7P0CJ90 424 aa9.53□□□□□ -0.88
CTDNEP1-212ENST00000576613 HIST1H1CP16403 213 aaKnown RBP9.53□□□□□ -0.88
CTDNEP1-212ENST00000576613 RHCEP18577 417 aa9.53□□□□□ -0.88
CTDNEP1-212ENST00000576613 KIR2DS4P43632 304 aa9.53□□□□□ -0.88
CTDNEP1-212ENST00000576613 UBE2E1P51965 193 aa9.53□□□□□ -0.88
CTDNEP1-212ENST00000576613 SLC7A2P52569 658 aa9.53□□□□□ -0.88
CTDNEP1-212ENST00000576613 PRB3Q04118 309 aaPredicted RBP9.53□□□□□ -0.88
CTDNEP1-212ENST00000576613 DBPQ10586 325 aaPredicted RBP9.53□□□□□ -0.88
CTDNEP1-212ENST00000576613 KLRD1Q13241 179 aa9.53□□□□□ -0.88
CTDNEP1-212ENST00000576613 IKZF1Q13422 519 aa9.53□□□□□ -0.88
CTDNEP1-212ENST00000576613 BLMHQ13867 455 aa9.53□□□□□ -0.88
CTDNEP1-212ENST00000576613 KRT72Q14CN4 511 aa9.53□□□□□ -0.88
CTDNEP1-212ENST00000576613 PGBD2Q6P3X8 592 aa9.53□□□□□ -0.88
CTDNEP1-212ENST00000576613 DUX4L9Q6RFH8 374 aaPredicted RBP9.53□□□□□ -0.88
CTDNEP1-212ENST00000576613 C1orf122Q6ZSJ8 110 aa9.53□□□□□ -0.88
CTDNEP1-212ENST00000576613 DPY19L4Q7Z388 723 aa9.53□□□□□ -0.88
CTDNEP1-212ENST00000576613 KLHDC1Q8N7A1 406 aa9.53□□□□□ -0.88
CTDNEP1-212ENST00000576613 Q8N7P7 452 aa9.53□□□□□ -0.88
CTDNEP1-212ENST00000576613 C11orf44Q8N8P7 122 aa9.53□□□□□ -0.88
CTDNEP1-212ENST00000576613 BEND2Q8NDZ0 799 aa9.53□□□□□ -0.88
CTDNEP1-212ENST00000576613 SDR9C7Q8NEX9 313 aa9.53□□□□□ -0.88
CTDNEP1-212ENST00000576613 OR4S1Q8NGB4 309 aa9.53□□□□□ -0.88
CTDNEP1-212ENST00000576613 OR51G2Q8NGK0 314 aa9.53□□□□□ -0.88
CTDNEP1-212ENST00000576613 C8orf46Q8TAG6 207 aa9.53□□□□□ -0.88
CTDNEP1-212ENST00000576613 CFHR4Q92496 578 aa9.53□□□□□ -0.88
CTDNEP1-212ENST00000576613 SGCDQ92629 289 aa9.53□□□□□ -0.88
CTDNEP1-212ENST00000576613 FAM162AQ96A26 154 aa9.53□□□□□ -0.88
CTDNEP1-212ENST00000576613 RCN3Q96D15 328 aa9.53□□□□□ -0.88
CTDNEP1-212ENST00000576613 CLPTM1LQ96KA5 538 aa9.53□□□□□ -0.88
CTDNEP1-212ENST00000576613 COPS4Q9BT78 406 aa9.53□□□□□ -0.88
CTDNEP1-212ENST00000576613 DCTN5Q9BTE1 182 aa9.53□□□□□ -0.88
CTDNEP1-212ENST00000576613 IFT27Q9BW83 186 aa9.53□□□□□ -0.88
CTDNEP1-212ENST00000576613 OR52D1Q9H346 318 aa9.53□□□□□ -0.88
CTDNEP1-212ENST00000576613 RANBP3Q9H6Z4 567 aaPredicted RBP9.53□□□□□ -0.88
CTDNEP1-212ENST00000576613 METTL8Q9H825 291 aaKnown RBP9.53□□□□□ -0.88
CTDNEP1-212ENST00000576613 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.53□□□□□ -0.88
CTDNEP1-212ENST00000576613 SAR1AQ9NR31 198 aa9.53□□□□□ -0.88
CTDNEP1-212ENST00000576613 NECAP2Q9NVZ3 263 aa9.53□□□□□ -0.88
CTDNEP1-212ENST00000576613 NDUFAF4Q9P032 175 aa9.53□□□□□ -0.88
CTDNEP1-212ENST00000576613 DUX4Q9UBX2 424 aa9.53□□□□□ -0.88
CTDNEP1-212ENST00000576613 MAB21L2Q9Y586 359 aa9.53□□□□□ -0.88
CTDNEP1-212ENST00000576613 OR6C68A6NDL8 312 aa9.52□□□□□ -0.89
CTDNEP1-212ENST00000576613 NKX6-3A6NJ46 265 aa9.52□□□□□ -0.89
CTDNEP1-212ENST00000576613 M0R1W7 72 aa9.52□□□□□ -0.89
CTDNEP1-212ENST00000576613 ACOT8O14734 319 aa9.52□□□□□ -0.89
CTDNEP1-212ENST00000576613 IDH3BO43837 385 aa9.52□□□□□ -0.89
CTDNEP1-212ENST00000576613 SEC23BQ15437 767 aa9.52□□□□□ -0.89
CTDNEP1-212ENST00000576613 TAF13Q15543 124 aa9.52□□□□□ -0.89
CTDNEP1-212ENST00000576613 WDR82Q6UXN9 313 aa9.52□□□□□ -0.89
CTDNEP1-212ENST00000576613 SLC15A3Q8IY34 581 aa9.52□□□□□ -0.89
CTDNEP1-212ENST00000576613 OR1M1Q8NGA1 313 aa9.52□□□□□ -0.89
CTDNEP1-212ENST00000576613 SSX3Q99909 188 aa9.52□□□□□ -0.89
CTDNEP1-212ENST00000576613 DNTTIP1Q9H147 329 aa9.52□□□□□ -0.89
CTDNEP1-212ENST00000576613 FN3KQ9H479 309 aa9.52□□□□□ -0.89
CTDNEP1-212ENST00000576613 TOR3AQ9H497 397 aa9.52□□□□□ -0.89
CTDNEP1-212ENST00000576613 MRPL22Q9NWU5 206 aaKnown RBP9.52□□□□□ -0.89
CTDNEP1-212ENST00000576613 GMPR2Q9P2T1 348 aaKnown RBP9.52□□□□□ -0.89
CTDNEP1-212ENST00000576613 FOXJ3Q9UPW0 622 aa9.52□□□□□ -0.89
CTDNEP1-212ENST00000576613 SIGLEC9Q9Y336 463 aa9.52□□□□□ -0.89
CTDNEP1-212ENST00000576613 N6AMT1Q9Y5N5 214 aa9.52□□□□□ -0.89
CTDNEP1-212ENST00000576613 CAPN7Q9Y6W3 813 aa9.52□□□□□ -0.89
CTDNEP1-212ENST00000576613 A0A1W2PQ09 198 aa9.51□□□□□ -0.89
CTDNEP1-212ENST00000576613 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.51□□□□□ -0.89
CTDNEP1-212ENST00000576613 NME4O00746 187 aa9.51□□□□□ -0.89
CTDNEP1-212ENST00000576613 NDUFAB1O14561 156 aa9.51□□□□□ -0.89
CTDNEP1-212ENST00000576613 SLC22A2O15244 555 aa9.51□□□□□ -0.89
CTDNEP1-212ENST00000576613 VSIG10L2P0DP72 767 aa9.51□□□□□ -0.89
CTDNEP1-212ENST00000576613 GNALP38405 381 aa9.51□□□□□ -0.89
CTDNEP1-212ENST00000576613 RPS27P42677 84 aaKnown RBP9.51□□□□□ -0.89
CTDNEP1-212ENST00000576613 TGM4P49221 684 aa9.51□□□□□ -0.89
CTDNEP1-212ENST00000576613 GSK3BP49841 420 aa9.51□□□□□ -0.89
CTDNEP1-212ENST00000576613 PRKXP51817 358 aa9.51□□□□□ -0.89
CTDNEP1-212ENST00000576613 DLX1P56177 255 aa9.51□□□□□ -0.89
CTDNEP1-212ENST00000576613 SMIM11AP58511 58 aa9.51□□□□□ -0.89
CTDNEP1-212ENST00000576613 CSNK2BP67870 215 aa9.51□□□□□ -0.89
CTDNEP1-212ENST00000576613 ELF3P78545 371 aaPredicted RBP9.51□□□□□ -0.89
CTDNEP1-212ENST00000576613 LY6EQ16553 131 aa9.51□□□□□ -0.89
CTDNEP1-212ENST00000576613 LRRC75BQ2VPJ9 315 aa9.51□□□□□ -0.89
CTDNEP1-212ENST00000576613 OXLD1Q5BKU9 147 aa9.51□□□□□ -0.89
CTDNEP1-212ENST00000576613 ATPAF1Q5TC12 328 aaPredicted RBP9.51□□□□□ -0.89
CTDNEP1-212ENST00000576613 STUMQ69YW2 141 aa9.51□□□□□ -0.89
CTDNEP1-212ENST00000576613 DCXRQ7Z4W1 244 aa9.51□□□□□ -0.89
CTDNEP1-212ENST00000576613 WDR86Q86TI4 376 aa9.51□□□□□ -0.89
CTDNEP1-212ENST00000576613 ZDHHC21Q8IVQ6 265 aa9.51□□□□□ -0.89
CTDNEP1-212ENST00000576613 C11orf53Q8IXP5 236 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms