RNA–Protein interactions for RNA: ENST00000576353.5

SNF8-217, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 700 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-217ENST00000576353 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP19.78■□□□□ 0.761e-9■■■■□ 20.9
SNF8-217ENST00000576353 TMEM269A0A1B0GVZ9 245 aa19.78■□□□□ 0.76
SNF8-217ENST00000576353 PSMD9O00233 223 aa19.78■□□□□ 0.76
SNF8-217ENST00000576353 MDH2P40926 338 aaKnown RBP19.78■□□□□ 0.76
SNF8-217ENST00000576353 CXCR4P61073 352 aa19.78■□□□□ 0.76
SNF8-217ENST00000576353 HNRNPA0Q13151 305 aaKnown RBP19.78■□□□□ 0.76
SNF8-217ENST00000576353 ZMYND11Q15326 602 aa19.78■□□□□ 0.76
SNF8-217ENST00000576353 CR1LQ2VPA4 569 aa19.78■□□□□ 0.76
SNF8-217ENST00000576353 ZNF829Q3KNS6 432 aaPredicted RBP19.78■□□□□ 0.76
SNF8-217ENST00000576353 MUC20Q8N307 709 aaPredicted RBP19.78■□□□□ 0.76
SNF8-217ENST00000576353 Q8TCH9 128 aa19.78■□□□□ 0.76
SNF8-217ENST00000576353 EME1Q96AY2 570 aa19.78■□□□□ 0.76
SNF8-217ENST00000576353 C14orf119Q9NWQ9 140 aa19.78■□□□□ 0.76
SNF8-217ENST00000576353 HIF1ANQ9NWT6 349 aa19.78■□□□□ 0.76
SNF8-217ENST00000576353 TRAV20A0A0B4J274 112 aa19.77■□□□□ 0.76
SNF8-217ENST00000576353 FAM157CP0CG43 387 aa19.77■□□□□ 0.76
SNF8-217ENST00000576353 ATP6V1E1P36543 226 aa19.77■□□□□ 0.76
SNF8-217ENST00000576353 EGR3Q06889 387 aa19.77■□□□□ 0.76
SNF8-217ENST00000576353 OR8B12Q8NGG6 310 aa19.77■□□□□ 0.76
SNF8-217ENST00000576353 OR8S1Q8NH09 359 aa19.77■□□□□ 0.76
SNF8-217ENST00000576353 ITFG2Q969R8 447 aa19.77■□□□□ 0.76
SNF8-217ENST00000576353 FN3KRPQ9HA64 309 aa19.77■□□□□ 0.76
SNF8-217ENST00000576353 FAM206AQ9NX38 181 aa19.77■□□□□ 0.76
SNF8-217ENST00000576353 JMJD1CQ15652 2540 aa19.77■□□□□ 0.76
SNF8-217ENST00000576353 MALRD1Q5VYJ5 2156 aa19.76■□□□□ 0.75
SNF8-217ENST00000576353 A0A0U1RQV5 110 aa19.76■□□□□ 0.75
SNF8-217ENST00000576353 FSTL3O95633 263 aa19.76■□□□□ 0.75
SNF8-217ENST00000576353 PTBP3O95758 552 aaKnown RBP19.76■□□□□ 0.75
SNF8-217ENST00000576353 CYB5R3P00387 301 aaPredicted RBP19.76■□□□□ 0.75
SNF8-217ENST00000576353 IFNA2P01563 188 aa19.76■□□□□ 0.75
SNF8-217ENST00000576353 OR2T7P0C7T2 308 aa19.76■□□□□ 0.75
SNF8-217ENST00000576353 GNALP38405 381 aa19.76■□□□□ 0.75
SNF8-217ENST00000576353 PMELP40967 661 aa19.76■□□□□ 0.75
SNF8-217ENST00000576353 SNRPGP62308 76 aaKnown RBP19.76■□□□□ 0.75
SNF8-217ENST00000576353 OR8B8Q15620 311 aa19.76■□□□□ 0.75
SNF8-217ENST00000576353 SLC25A30Q5SVS4 291 aa19.76■□□□□ 0.75
SNF8-217ENST00000576353 PRIMA1Q86XR5 153 aa19.76■□□□□ 0.75
SNF8-217ENST00000576353 OR2T27Q8NH04 317 aa19.76■□□□□ 0.75
SNF8-217ENST00000576353 SLC29A1Q99808 456 aa19.76■□□□□ 0.75
SNF8-217ENST00000576353 TTTY10Q9BZA0 68 aa19.76■□□□□ 0.75
SNF8-217ENST00000576353 UFSP2Q9NUQ7 469 aa19.76■□□□□ 0.75
SNF8-217ENST00000576353 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP19.76■□□□□ 0.75
SNF8-217ENST00000576353 DYSFO75923 2080 aa19.75■□□□□ 0.75
SNF8-217ENST00000576353 PRR32B1ATL7 298 aa19.75■□□□□ 0.75
SNF8-217ENST00000576353 E9PQ18 207 aa19.75■□□□□ 0.75
SNF8-217ENST00000576353 PLPP2O43688 288 aa19.75■□□□□ 0.75
SNF8-217ENST00000576353 CPT2P23786 658 aa19.75■□□□□ 0.75
SNF8-217ENST00000576353 RBMXP38159 391 aaKnown RBP19.75■□□□□ 0.75
SNF8-217ENST00000576353 MPPED2Q15777 294 aa19.75■□□□□ 0.75
SNF8-217ENST00000576353 PRAMEF6Q5VXH4 476 aa19.75■□□□□ 0.75
SNF8-217ENST00000576353 MEDAGQ5VYS4 303 aa19.75■□□□□ 0.75
SNF8-217ENST00000576353 ZNF771Q7L3S4 317 aaPredicted RBP19.75■□□□□ 0.75
SNF8-217ENST00000576353 UBE2FQ969M7 185 aa19.75■□□□□ 0.75
SNF8-217ENST00000576353 APOL4Q9BPW4 351 aa19.75■□□□□ 0.75
SNF8-217ENST00000576353 PBOV1Q9GZY1 135 aa19.75■□□□□ 0.75
SNF8-217ENST00000576353 PATZ1Q9HBE1 687 aaKnown RBP19.75■□□□□ 0.75
SNF8-217ENST00000576353 RHBDD3Q9Y3P4 386 aa19.75■□□□□ 0.75
SNF8-217ENST00000576353 GMPPBQ9Y5P6 360 aa19.75■□□□□ 0.75
SNF8-217ENST00000576353 TANC2Q9HCD6 1990 aa19.75■□□□□ 0.75
SNF8-217ENST00000576353 PPIAL4EA0A075B759 164 aa19.74■□□□□ 0.75
SNF8-217ENST00000576353 PPIAL4DF5H284 164 aa19.74■□□□□ 0.75
SNF8-217ENST00000576353 FAM20BO75063 409 aa19.74■□□□□ 0.75
SNF8-217ENST00000576353 PPIAL4FP0DN26 164 aa19.74■□□□□ 0.75
SNF8-217ENST00000576353 SRD5A1P18405 259 aa19.74■□□□□ 0.75
SNF8-217ENST00000576353 ZSCAN26Q16670 478 aa19.74■□□□□ 0.75
SNF8-217ENST00000576353 RFLNBQ8N5W9 214 aa19.74■□□□□ 0.75
SNF8-217ENST00000576353 DVL3Q92997 716 aaPredicted RBP19.74■□□□□ 0.75
SNF8-217ENST00000576353 LYZL4Q96KX0 146 aa19.74■□□□□ 0.75
SNF8-217ENST00000576353 MBOAT4Q96T53 435 aa19.74■□□□□ 0.75
SNF8-217ENST00000576353 PAPOLGQ9BWT3 736 aaKnown RBP19.74■□□□□ 0.75
SNF8-217ENST00000576353 TMEM165Q9HC07 324 aa19.74■□□□□ 0.75
SNF8-217ENST00000576353 ABCB9Q9NP78 766 aa19.74■□□□□ 0.75
SNF8-217ENST00000576353 RNF7Q9UBF6 113 aa19.74■□□□□ 0.75
SNF8-217ENST00000576353 PPIAL4AQ9Y536 164 aa19.74■□□□□ 0.75
SNF8-217ENST00000576353 MPC1Q9Y5U8 109 aa19.74■□□□□ 0.75
SNF8-217ENST00000576353 ANXA2P2A6NMY6 339 aa19.73■□□□□ 0.75
SNF8-217ENST00000576353 SNTNA6NMZ2 147 aa19.73■□□□□ 0.75
SNF8-217ENST00000576353 KRT8P05787 483 aa19.73■□□□□ 0.75
SNF8-217ENST00000576353 GRPP07492 148 aa19.73■□□□□ 0.75
SNF8-217ENST00000576353 MTNR1AP48039 350 aa19.73■□□□□ 0.75
SNF8-217ENST00000576353 IL5RAQ01344 420 aa19.73■□□□□ 0.75
SNF8-217ENST00000576353 OCLNQ16625 522 aa19.73■□□□□ 0.75
SNF8-217ENST00000576353 OR10H4Q8NGA5 316 aa19.73■□□□□ 0.75
SNF8-217ENST00000576353 TBX5Q99593 518 aa19.73■□□□□ 0.75
SNF8-217ENST00000576353 MOB1AQ9H8S9 216 aa19.73■□□□□ 0.75
SNF8-217ENST00000576353 NUFIP1Q9UHK0 495 aaKnown RBP19.73■□□□□ 0.75
SNF8-217ENST00000576353 MRM2Q9UI43 246 aaKnown RBP19.73■□□□□ 0.75
SNF8-217ENST00000576353 ABCA2Q9BZC7 2435 aa19.73■□□□□ 0.75
SNF8-217ENST00000576353 A0A1W2PQL4 384 aaPredicted RBP19.72■□□□□ 0.75
SNF8-217ENST00000576353 LOC110117498-PIK3R3F6TDL0 507 aa19.72■□□□□ 0.75
SNF8-217ENST00000576353 MPZL2O60487 215 aa19.72■□□□□ 0.75
SNF8-217ENST00000576353 ENTPD6O75354 484 aa19.72■□□□□ 0.75
SNF8-217ENST00000576353 FOXH1O75593 365 aa19.72■□□□□ 0.75
SNF8-217ENST00000576353 ZNF205O95201 554 aa19.72■□□□□ 0.75
SNF8-217ENST00000576353 CST4P01036 141 aa19.72■□□□□ 0.75
SNF8-217ENST00000576353 ATP6V1B1P15313 513 aa19.72■□□□□ 0.75
SNF8-217ENST00000576353 MAP2K3P46734 347 aa19.72■□□□□ 0.75
SNF8-217ENST00000576353 IL17RELQ6ZVW7 336 aa19.72■□□□□ 0.75
SNF8-217ENST00000576353 COMMD2Q86X83 199 aa19.72■□□□□ 0.75
SNF8-217ENST00000576353 MICU1Q9BPX6 476 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms