RNA–Protein interactions for RNA: ENST00000575663.5

SMG6-219, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-219ENST00000575663 hCG_1807616A0A1W2PRN6 198 aa4.78□□□□□ -1.64
SMG6-219ENST00000575663 TRAPPC13A5PLN9 417 aa4.78□□□□□ -1.64
SMG6-219ENST00000575663 OR6C6A6NF89 314 aa4.78□□□□□ -1.64
SMG6-219ENST00000575663 A6NLC8 198 aa4.78□□□□□ -1.64
SMG6-219ENST00000575663 M0R1W7 72 aa4.78□□□□□ -1.64
SMG6-219ENST00000575663 M0R3H8 397 aa4.78□□□□□ -1.64
SMG6-219ENST00000575663 CLIC1O00299 241 aa4.78□□□□□ -1.64
SMG6-219ENST00000575663 NDUFB3O43676 98 aa4.78□□□□□ -1.64
SMG6-219ENST00000575663 CHST1O43916 411 aa4.78□□□□□ -1.64
SMG6-219ENST00000575663 TPST1O60507 370 aa4.78□□□□□ -1.64
SMG6-219ENST00000575663 TPST2O60704 377 aa4.78□□□□□ -1.64
SMG6-219ENST00000575663 RAMP3O60896 148 aa4.78□□□□□ -1.64
SMG6-219ENST00000575663 OR7A10O76100 309 aa4.78□□□□□ -1.64
SMG6-219ENST00000575663 SCGB1D2O95969 90 aa4.78□□□□□ -1.64
SMG6-219ENST00000575663 ALDOCP09972 364 aaKnown RBP4.78□□□□□ -1.64
SMG6-219ENST00000575663 BMP2P12643 396 aa4.78□□□□□ -1.64
SMG6-219ENST00000575663 PPIBP23284 216 aaKnown RBP4.78□□□□□ -1.64
SMG6-219ENST00000575663 IL12AP29459 219 aa4.78□□□□□ -1.64
SMG6-219ENST00000575663 AQP2P41181 271 aa4.78□□□□□ -1.64
SMG6-219ENST00000575663 GSK3BP49841 420 aa4.78□□□□□ -1.64
SMG6-219ENST00000575663 POLR2JP52435 117 aaKnown RBP4.78□□□□□ -1.64
SMG6-219ENST00000575663 MXRA7P84157 204 aa4.78□□□□□ -1.64
SMG6-219ENST00000575663 DGCR2P98153 550 aa4.78□□□□□ -1.64
SMG6-219ENST00000575663 CDK6Q00534 326 aa4.78□□□□□ -1.64
SMG6-219ENST00000575663 PRB3Q04118 309 aaPredicted RBP4.78□□□□□ -1.64
SMG6-219ENST00000575663 MZT1Q08AG7 82 aa4.78□□□□□ -1.64
SMG6-219ENST00000575663 MALLQ13021 153 aa4.78□□□□□ -1.64
SMG6-219ENST00000575663 CBX3Q13185 183 aa4.78□□□□□ -1.64
SMG6-219ENST00000575663 CNN3Q15417 329 aaKnown RBP4.78□□□□□ -1.64
SMG6-219ENST00000575663 MPPED2Q15777 294 aa4.78□□□□□ -1.64
SMG6-219ENST00000575663 MICBQ29980 383 aa4.78□□□□□ -1.64
SMG6-219ENST00000575663 ANKDD1AQ495B1 522 aa4.78□□□□□ -1.64
SMG6-219ENST00000575663 AGKQ53H12 422 aa4.78□□□□□ -1.64
SMG6-219ENST00000575663 ALG10Q5BKT4 473 aa4.78□□□□□ -1.64
SMG6-219ENST00000575663 LRRC10Q5BKY1 277 aa4.78□□□□□ -1.64
SMG6-219ENST00000575663 RABL3Q5HYI8 236 aa4.78□□□□□ -1.64
SMG6-219ENST00000575663 ENTPD8Q5MY95 495 aa4.78□□□□□ -1.64
SMG6-219ENST00000575663 SAMD4BQ5PRF9 694 aaKnown RBP4.78□□□□□ -1.64
SMG6-219ENST00000575663 TEX36Q5VZQ5 186 aa4.78□□□□□ -1.64
SMG6-219ENST00000575663 C8orf82Q6P1X6 216 aaPredicted RBP4.78□□□□□ -1.64
SMG6-219ENST00000575663 KCTD18Q6PI47 426 aaPredicted RBP4.78□□□□□ -1.64
SMG6-219ENST00000575663 CRIP3Q6Q6R5 217 aa4.78□□□□□ -1.64
SMG6-219ENST00000575663 LINC00114Q6XXX2 140 aa4.78□□□□□ -1.64
SMG6-219ENST00000575663 SPATA24Q86W54 205 aa4.78□□□□□ -1.64
SMG6-219ENST00000575663 FAM90A1Q86YD7 464 aa4.78□□□□□ -1.64
SMG6-219ENST00000575663 FUNDC1Q8IVP5 155 aa4.78□□□□□ -1.64
SMG6-219ENST00000575663 PNKDQ8N490 385 aa4.78□□□□□ -1.64
SMG6-219ENST00000575663 PLPP7Q8NBV4 271 aa4.78□□□□□ -1.64
SMG6-219ENST00000575663 LY6G5BQ8NDX9 201 aa4.78□□□□□ -1.64
SMG6-219ENST00000575663 OR51D1Q8NGF3 324 aa4.78□□□□□ -1.64
SMG6-219ENST00000575663 OR4X2Q8NGF9 303 aa4.78□□□□□ -1.64
SMG6-219ENST00000575663 OR8J3Q8NGG0 315 aa4.78□□□□□ -1.64
SMG6-219ENST00000575663 ADAMTS16Q8TE57 1224 aa4.78□□□□□ -1.64
SMG6-219ENST00000575663 WIPF2Q8TF74 440 aaPredicted RBP4.78□□□□□ -1.64
SMG6-219ENST00000575663 SPRYD4Q8WW59 207 aaPredicted RBP4.78□□□□□ -1.64
SMG6-219ENST00000575663 ACOT11Q8WXI4 607 aaPredicted RBP4.78□□□□□ -1.64
SMG6-219ENST00000575663 H1FXQ92522 213 aaKnown RBP4.78□□□□□ -1.64
SMG6-219ENST00000575663 SLC7A6Q92536 515 aa4.78□□□□□ -1.64
SMG6-219ENST00000575663 RORBQ92753 470 aa4.78□□□□□ -1.64
SMG6-219ENST00000575663 SPDL1Q96EA4 605 aa4.78□□□□□ -1.64
SMG6-219ENST00000575663 OR5M11Q96RB7 305 aa4.78□□□□□ -1.64
SMG6-219ENST00000575663 CGREF1Q99674 301 aa4.78□□□□□ -1.64
SMG6-219ENST00000575663 CDCA4Q9BXL8 241 aa4.78□□□□□ -1.64
SMG6-219ENST00000575663 WNT10AQ9GZT5 417 aa4.78□□□□□ -1.64
SMG6-219ENST00000575663 MEGF9Q9H1U4 602 aa4.78□□□□□ -1.64
SMG6-219ENST00000575663 TXNIPQ9H3M7 391 aa4.78□□□□□ -1.64
SMG6-219ENST00000575663 SPAG4Q9NPE6 437 aa4.78□□□□□ -1.64
SMG6-219ENST00000575663 ABCB10Q9NRK6 738 aa4.78□□□□□ -1.64
SMG6-219ENST00000575663 C20orf141Q9NUB4 165 aa4.78□□□□□ -1.64
SMG6-219ENST00000575663 GAR1Q9NY12 217 aaKnown RBP4.78□□□□□ -1.64
SMG6-219ENST00000575663 CCDC167Q9P0B6 97 aa4.78□□□□□ -1.64
SMG6-219ENST00000575663 CORO2BQ9UQ03 480 aa4.78□□□□□ -1.64
SMG6-219ENST00000575663 POLR1DQ9Y2S0 133 aa4.78□□□□□ -1.64
SMG6-219ENST00000575663 DOCK11Q5JSL3 2073 aa4.77□□□□□ -1.65
SMG6-219ENST00000575663 PCLOQ9Y6V0 5065 aa4.77□□□□□ -1.65
SMG6-219ENST00000575663 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.77□□□□□ -1.65
SMG6-219ENST00000575663 A0A1W2PQ09 198 aa4.77□□□□□ -1.65
SMG6-219ENST00000575663 TCRBV4S1A1TA0A5B7 111 aa4.77□□□□□ -1.65
SMG6-219ENST00000575663 MEGF11A6BM72 1044 aa4.77□□□□□ -1.65
SMG6-219ENST00000575663 A6NIZ1 184 aa4.77□□□□□ -1.65
SMG6-219ENST00000575663 NKX6-3A6NJ46 265 aa4.77□□□□□ -1.65
SMG6-219ENST00000575663 MRASO14807 208 aa4.77□□□□□ -1.65
SMG6-219ENST00000575663 SYNGR1O43759 233 aa4.77□□□□□ -1.65
SMG6-219ENST00000575663 GMDSO60547 372 aa4.77□□□□□ -1.65
SMG6-219ENST00000575663 FKBP6O75344 327 aa4.77□□□□□ -1.65
SMG6-219ENST00000575663 TIPRLO75663 272 aa4.77□□□□□ -1.65
SMG6-219ENST00000575663 CIB2O75838 187 aa4.77□□□□□ -1.65
SMG6-219ENST00000575663 JTBO76095 146 aa4.77□□□□□ -1.65
SMG6-219ENST00000575663 GLCEO94923 617 aa4.77□□□□□ -1.65
SMG6-219ENST00000575663 IGF2P01344 180 aa4.77□□□□□ -1.65
SMG6-219ENST00000575663 MT-ND1P03886 318 aa4.77□□□□□ -1.65
SMG6-219ENST00000575663 HSD17B1P14061 328 aa4.77□□□□□ -1.65
SMG6-219ENST00000575663 MUC1P15941 1255 aaPredicted RBP4.77□□□□□ -1.65
SMG6-219ENST00000575663 FUT1P19526 365 aa4.77□□□□□ -1.65
SMG6-219ENST00000575663 AQP1P29972 269 aa4.77□□□□□ -1.65
SMG6-219ENST00000575663 GRK5P34947 590 aa4.77□□□□□ -1.65
SMG6-219ENST00000575663 DLX1P56177 255 aa4.77□□□□□ -1.65
SMG6-219ENST00000575663 ACTR3P61158 418 aa4.77□□□□□ -1.65
SMG6-219ENST00000575663 RAP1BP61224 184 aa4.77□□□□□ -1.65
SMG6-219ENST00000575663 RPL27P61353 136 aaKnown RBP4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms