RNA–Protein interactions for RNA: ENST00000575426.1

LITAF-217, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5

Gene LITAF, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-217ENST00000575426 GNALP38405 381 aa12.89□□□□□ -0.35
LITAF-217ENST00000575426 MAP2K3P46734 347 aa12.89□□□□□ -0.35
LITAF-217ENST00000575426 CHN2P52757 468 aa12.89□□□□□ -0.35
LITAF-217ENST00000575426 ZNF85Q03923 595 aa12.89□□□□□ -0.35
LITAF-217ENST00000575426 RAB40BQ12829 278 aa12.89□□□□□ -0.35
LITAF-217ENST00000575426 LIPNQ5VXI9 398 aa12.89□□□□□ -0.35
LITAF-217ENST00000575426 CLEC9AQ6UXN8 241 aa12.89□□□□□ -0.35
LITAF-217ENST00000575426 KLBQ86Z14 1044 aa12.89□□□□□ -0.35
LITAF-217ENST00000575426 RAB1CQ92928 201 aa12.89□□□□□ -0.35
LITAF-217ENST00000575426 ITFG2Q969R8 447 aa12.89□□□□□ -0.35
LITAF-217ENST00000575426 MEGF10Q96KG7 1140 aa12.89□□□□□ -0.35
LITAF-217ENST00000575426 SIGLEC11Q96RL6 698 aa12.89□□□□□ -0.35
LITAF-217ENST00000575426 ADAT1Q9BUB4 502 aaKnown RBP12.89□□□□□ -0.35
LITAF-217ENST00000575426 NUFIP1Q9UHK0 495 aaKnown RBP12.89□□□□□ -0.35
LITAF-217ENST00000575426 OR52A1Q9UKL2 312 aa12.89□□□□□ -0.35
LITAF-217ENST00000575426 H0YJX3 145 aa12.88□□□□□ -0.35
LITAF-217ENST00000575426 MTRF1O75570 445 aaKnown RBP12.88□□□□□ -0.35
LITAF-217ENST00000575426 RP2O75695 350 aa12.88□□□□□ -0.35
LITAF-217ENST00000575426 HEXAP06865 529 aa12.88□□□□□ -0.35
LITAF-217ENST00000575426 ATP6V1B1P15313 513 aa12.88□□□□□ -0.35
LITAF-217ENST00000575426 ISL1P61371 349 aa12.88□□□□□ -0.35
LITAF-217ENST00000575426 ACTA2P62736 377 aa12.88□□□□□ -0.35
LITAF-217ENST00000575426 ACTG2P63267 376 aa12.88□□□□□ -0.35
LITAF-217ENST00000575426 MFGE8Q08431 387 aaPredicted RBP12.88□□□□□ -0.35
LITAF-217ENST00000575426 RIPK1Q13546 671 aa12.88□□□□□ -0.35
LITAF-217ENST00000575426 TP53I3Q53FA7 332 aa12.88□□□□□ -0.35
LITAF-217ENST00000575426 THAP5Q7Z6K1 395 aa12.88□□□□□ -0.35
LITAF-217ENST00000575426 CELF2-AS1Q8N7Q2 184 aa12.88□□□□□ -0.35
LITAF-217ENST00000575426 OR8S1Q8NH09 359 aa12.88□□□□□ -0.35
LITAF-217ENST00000575426 CNIH3Q8TBE1 160 aa12.88□□□□□ -0.35
LITAF-217ENST00000575426 OR51E1Q8TCB6 317 aa12.88□□□□□ -0.35
LITAF-217ENST00000575426 APH1BQ8WW43 257 aa12.88□□□□□ -0.35
LITAF-217ENST00000575426 NRG4Q8WWG1 115 aa12.88□□□□□ -0.35
LITAF-217ENST00000575426 INPP5EQ9NRR6 644 aa12.88□□□□□ -0.35
LITAF-217ENST00000575426 MRPS18AQ9NVS2 196 aaKnown RBP12.88□□□□□ -0.35
LITAF-217ENST00000575426 C14orf119Q9NWQ9 140 aa12.88□□□□□ -0.35
LITAF-217ENST00000575426 VPS13CQ709C8 3753 aa12.87□□□□□ -0.35
LITAF-217ENST00000575426 A0A1B0GWJ7 208 aa12.87□□□□□ -0.35
LITAF-217ENST00000575426 J3QLW9 94 aa12.87□□□□□ -0.35
LITAF-217ENST00000575426 J3QRE1 110 aa12.87□□□□□ -0.35
LITAF-217ENST00000575426 WBP4O75554 376 aaKnown RBP12.87□□□□□ -0.35
LITAF-217ENST00000575426 ATP6V1G2O95670 118 aa12.87□□□□□ -0.35
LITAF-217ENST00000575426 PNPP00491 289 aa12.87□□□□□ -0.35
LITAF-217ENST00000575426 ZNF19P17023 458 aa12.87□□□□□ -0.35
LITAF-217ENST00000575426 CD200P41217 278 aa12.87□□□□□ -0.35
LITAF-217ENST00000575426 MVKQ03426 396 aa12.87□□□□□ -0.35
LITAF-217ENST00000575426 GALEQ14376 348 aa12.87□□□□□ -0.35
LITAF-217ENST00000575426 OR8B8Q15620 311 aa12.87□□□□□ -0.35
LITAF-217ENST00000575426 SMN1Q16637 294 aaKnown RBP12.87□□□□□ -0.35
LITAF-217ENST00000575426 CDONQ4KMG0 1287 aa12.87□□□□□ -0.35
LITAF-217ENST00000575426 SPRNQ5BIV9 151 aa12.87□□□□□ -0.35
LITAF-217ENST00000575426 ZNF684Q5T5D7 378 aa12.87□□□□□ -0.35
LITAF-217ENST00000575426 LHFPL3Q86UP9 236 aa12.87□□□□□ -0.35
LITAF-217ENST00000575426 ELMOD2Q8IZ81 293 aa12.87□□□□□ -0.35
LITAF-217ENST00000575426 SEMA6DQ8NFY4 1073 aa12.87□□□□□ -0.35
LITAF-217ENST00000575426 ERGIC1Q969X5 290 aa12.87□□□□□ -0.35
LITAF-217ENST00000575426 FAM71F1Q96KD3 344 aaPredicted RBP12.87□□□□□ -0.35
LITAF-217ENST00000575426 LYZL4Q96KX0 146 aa12.87□□□□□ -0.35
LITAF-217ENST00000575426 HIST1H2AAQ96QV6 131 aa12.87□□□□□ -0.35
LITAF-217ENST00000575426 SMR3AQ99954 134 aa12.87□□□□□ -0.35
LITAF-217ENST00000575426 PAPOLGQ9BWT3 736 aaKnown RBP12.87□□□□□ -0.35
LITAF-217ENST00000575426 GSX1Q9H4S2 264 aaPredicted RBP12.87□□□□□ -0.35
LITAF-217ENST00000575426 ABCB9Q9NP78 766 aa12.87□□□□□ -0.35
LITAF-217ENST00000575426 GPR84Q9NQS5 396 aa12.87□□□□□ -0.35
LITAF-217ENST00000575426 TMEM106BQ9NUM4 274 aa12.87□□□□□ -0.35
LITAF-217ENST00000575426 CACNG2Q9Y698 323 aa12.87□□□□□ -0.35
LITAF-217ENST00000575426 IGHV4-61A0A0C4DH41 118 aa12.86□□□□□ -0.35
LITAF-217ENST00000575426 LRRC30A6NM36 301 aa12.86□□□□□ -0.35
LITAF-217ENST00000575426 ANXA2P2A6NMY6 339 aa12.86□□□□□ -0.35
LITAF-217ENST00000575426 SRSF10O75494 262 aaKnown RBP12.86□□□□□ -0.35
LITAF-217ENST00000575426 LY6G6DO95868 133 aa12.86□□□□□ -0.35
LITAF-217ENST00000575426 TTRP02766 147 aa12.86□□□□□ -0.35
LITAF-217ENST00000575426 IRF2P14316 349 aa12.86□□□□□ -0.35
LITAF-217ENST00000575426 RIPPLY1Q0D2K3 151 aa12.86□□□□□ -0.35
LITAF-217ENST00000575426 MED21Q13503 144 aa12.86□□□□□ -0.35
LITAF-217ENST00000575426 TMEM249Q2WGJ8 235 aa12.86□□□□□ -0.35
LITAF-217ENST00000575426 AVPI1Q5T686 147 aa12.86□□□□□ -0.35
LITAF-217ENST00000575426 MOGAT3Q86VF5 341 aa12.86□□□□□ -0.35
LITAF-217ENST00000575426 C1orf87Q8N0U7 546 aa12.86□□□□□ -0.35
LITAF-217ENST00000575426 OR52I1Q8NGK6 324 aa12.86□□□□□ -0.35
LITAF-217ENST00000575426 OR11L1Q8NGX0 322 aa12.86□□□□□ -0.35
LITAF-217ENST00000575426 PIGCQ92535 297 aa12.86□□□□□ -0.35
LITAF-217ENST00000575426 TFAP2CQ92754 450 aa12.86□□□□□ -0.35
LITAF-217ENST00000575426 HPS1Q92902 700 aa12.86□□□□□ -0.35
LITAF-217ENST00000575426 PPP1R14AQ96A00 147 aa12.86□□□□□ -0.35
LITAF-217ENST00000575426 ALG8Q9BVK2 526 aa12.86□□□□□ -0.35
LITAF-217ENST00000575426 NARFLQ9H6Q4 476 aa12.86□□□□□ -0.35
LITAF-217ENST00000575426 GCM1Q9NP62 436 aa12.86□□□□□ -0.35
LITAF-217ENST00000575426 FGF20Q9NP95 211 aaPredicted RBP12.86□□□□□ -0.35
LITAF-217ENST00000575426 G6PC2Q9NQR9 355 aa12.86□□□□□ -0.35
LITAF-217ENST00000575426 SLC22A13Q9Y226 551 aa12.86□□□□□ -0.35
LITAF-217ENST00000575426 MYRFQ9Y2G1 1151 aa12.86□□□□□ -0.35
LITAF-217ENST00000575426 MPC1Q9Y5U8 109 aa12.86□□□□□ -0.35
LITAF-217ENST00000575426 ABCA1O95477 2261 aa12.85□□□□□ -0.35
LITAF-217ENST00000575426 A0A096LNT2 108 aa12.85□□□□□ -0.35
LITAF-217ENST00000575426 IGHV3-64DA0A0J9YX35 117 aa12.85□□□□□ -0.35
LITAF-217ENST00000575426 A0A1B0GVI7 797 aa12.85□□□□□ -0.35
LITAF-217ENST00000575426 ISPDA4D126 451 aa12.85□□□□□ -0.35
LITAF-217ENST00000575426 LRP5LA4QPB2 252 aa12.85□□□□□ -0.35
LITAF-217ENST00000575426 FAM20BO75063 409 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms