RNA–Protein interactions for RNA: ENST00000574848.5

LITAF-216, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-216ENST00000574848 DEFA3P59666 94 aa9.1□□□□□ -0.95
LITAF-216ENST00000574848 RAB1AP62820 205 aa9.1□□□□□ -0.95
LITAF-216ENST00000574848 MXD1Q05195 221 aa9.1□□□□□ -0.95
LITAF-216ENST00000574848 MSMPQ1L6U9 139 aa9.1□□□□□ -0.95
LITAF-216ENST00000574848 VHLLQ6RSH7 139 aa9.1□□□□□ -0.95
LITAF-216ENST00000574848 CEACAM19Q7Z692 300 aa9.1□□□□□ -0.95
LITAF-216ENST00000574848 SKA3Q8IX90 412 aa9.1□□□□□ -0.95
LITAF-216ENST00000574848 THEM6Q8WUY1 208 aa9.1□□□□□ -0.95
LITAF-216ENST00000574848 GHSRQ92847 366 aa9.1□□□□□ -0.95
LITAF-216ENST00000574848 MRPL24Q96A35 216 aaKnown RBP9.1□□□□□ -0.95
LITAF-216ENST00000574848 PGLYRP3Q96LB9 341 aa9.1□□□□□ -0.95
LITAF-216ENST00000574848 KCNK17Q96T54 332 aa9.1□□□□□ -0.95
LITAF-216ENST00000574848 MROQ9BYG7 248 aa9.1□□□□□ -0.95
LITAF-216ENST00000574848 SLITRK2Q9H156 845 aa9.1□□□□□ -0.95
LITAF-216ENST00000574848 C1orf198Q9H425 327 aa9.1□□□□□ -0.95
LITAF-216ENST00000574848 ACOXLQ9NUZ1 547 aa9.1□□□□□ -0.95
LITAF-216ENST00000574848 TMEM160Q9NX00 188 aa9.1□□□□□ -0.95
LITAF-216ENST00000574848 KCNG2Q9UJ96 466 aa9.1□□□□□ -0.95
LITAF-216ENST00000574848 COPS3Q9UNS2 423 aa9.1□□□□□ -0.95
LITAF-216ENST00000574848 ZNF281Q9Y2X9 895 aa9.1□□□□□ -0.95
LITAF-216ENST00000574848 JMJD1CQ15652 2540 aa9.1□□□□□ -0.95
LITAF-216ENST00000574848 TRAV1-2A0A0B4J238 106 aa9.09□□□□□ -0.95
LITAF-216ENST00000574848 LOC390937A0A1W2PQ73 354 aa9.09□□□□□ -0.95
LITAF-216ENST00000574848 TVP23AA6NH52 213 aa9.09□□□□□ -0.95
LITAF-216ENST00000574848 TMEM212A6NML5 194 aa9.09□□□□□ -0.95
LITAF-216ENST00000574848 VSTM5A8MXK1 200 aa9.09□□□□□ -0.95
LITAF-216ENST00000574848 DCTN6O00399 190 aa9.09□□□□□ -0.95
LITAF-216ENST00000574848 ZNF593O00488 134 aaPredicted RBP9.09□□□□□ -0.95
LITAF-216ENST00000574848 ZNF254O75437 659 aa9.09□□□□□ -0.95
LITAF-216ENST00000574848 SC5DO75845 299 aa9.09□□□□□ -0.95
LITAF-216ENST00000574848 FARS2O95363 451 aaKnown RBP9.09□□□□□ -0.95
LITAF-216ENST00000574848 SERPINA5P05154 406 aa9.09□□□□□ -0.95
LITAF-216ENST00000574848 QDPRP09417 244 aa9.09□□□□□ -0.95
LITAF-216ENST00000574848 SPARCP09486 303 aa9.09□□□□□ -0.95
LITAF-216ENST00000574848 CTLA4P16410 223 aa9.09□□□□□ -0.95
LITAF-216ENST00000574848 USF1P22415 310 aaPredicted RBP9.09□□□□□ -0.95
LITAF-216ENST00000574848 PTBP1P26599 531 aaKnown RBP eCLIP9.09□□□□□ -0.95
LITAF-216ENST00000574848 GIFP27352 417 aa9.09□□□□□ -0.95
LITAF-216ENST00000574848 GLRXP35754 106 aa9.09□□□□□ -0.95
LITAF-216ENST00000574848 NR4A2P43354 598 aa9.09□□□□□ -0.95
LITAF-216ENST00000574848 HCCSP53701 268 aa9.09□□□□□ -0.95
LITAF-216ENST00000574848 RPS23P62266 143 aaKnown RBP9.09□□□□□ -0.95
LITAF-216ENST00000574848 MRPS34P82930 218 aaKnown RBP9.09□□□□□ -0.95
LITAF-216ENST00000574848 ALKBH1Q13686 389 aaKnown RBP9.09□□□□□ -0.95
LITAF-216ENST00000574848 ACSM3Q53FZ2 586 aa9.09□□□□□ -0.95
LITAF-216ENST00000574848 TEX30Q5JUR7 227 aa9.09□□□□□ -0.95
LITAF-216ENST00000574848 ZNF684Q5T5D7 378 aa9.09□□□□□ -0.95
LITAF-216ENST00000574848 TMEM91Q6ZNR0 172 aa9.09□□□□□ -0.95
LITAF-216ENST00000574848 DPY19L4Q7Z388 723 aa9.09□□□□□ -0.95
LITAF-216ENST00000574848 CCDC190Q86UF4 302 aa9.09□□□□□ -0.95
LITAF-216ENST00000574848 GLB1L2Q8IW92 636 aa9.09□□□□□ -0.95
LITAF-216ENST00000574848 FGFBP3Q8TAT2 258 aa9.09□□□□□ -0.95
LITAF-216ENST00000574848 RPS4Y2Q8TD47 263 aa9.09□□□□□ -0.95
LITAF-216ENST00000574848 ZNRF4Q8WWF5 429 aa9.09□□□□□ -0.95
LITAF-216ENST00000574848 NEU4Q8WWR8 484 aaPredicted RBP9.09□□□□□ -0.95
LITAF-216ENST00000574848 NSMAFQ92636 917 aa9.09□□□□□ -0.95
LITAF-216ENST00000574848 MCHR2Q969V1 340 aa9.09□□□□□ -0.95
LITAF-216ENST00000574848 OR8B4Q96RC9 309 aa9.09□□□□□ -0.95
LITAF-216ENST00000574848 PIMREGQ9BSJ6 248 aa9.09□□□□□ -0.95
LITAF-216ENST00000574848 TTTY10Q9BZA0 68 aa9.09□□□□□ -0.95
LITAF-216ENST00000574848 BARHL1Q9BZE3 327 aa9.09□□□□□ -0.95
LITAF-216ENST00000574848 RAB1BQ9H0U4 201 aa9.09□□□□□ -0.95
LITAF-216ENST00000574848 SPEF1Q9Y4P9 236 aa9.09□□□□□ -0.95
LITAF-216ENST00000574848 UGT2A1Q9Y4X1 527 aa9.09□□□□□ -0.95
LITAF-216ENST00000574848 ANKRD61A6NGH8 418 aa9.08□□□□□ -0.96
LITAF-216ENST00000574848 A8MV72 311 aaPredicted RBP9.08□□□□□ -0.96
LITAF-216ENST00000574848 E9PI62 339 aa9.08□□□□□ -0.96
LITAF-216ENST00000574848 UPK1BO75841 260 aa9.08□□□□□ -0.96
LITAF-216ENST00000574848 ERCC1P07992 297 aaPredicted RBP9.08□□□□□ -0.96
LITAF-216ENST00000574848 MMP7P09237 267 aaPredicted RBP9.08□□□□□ -0.96
LITAF-216ENST00000574848 IGHV4-31P0DP07 118 aa9.08□□□□□ -0.96
LITAF-216ENST00000574848 GUCA1AP43080 201 aaPredicted RBP9.08□□□□□ -0.96
LITAF-216ENST00000574848 ZNF84P51523 738 aa9.08□□□□□ -0.96
LITAF-216ENST00000574848 CCR9P51686 369 aa9.08□□□□□ -0.96
LITAF-216ENST00000574848 RIDAP52758 137 aaKnown RBP9.08□□□□□ -0.96
LITAF-216ENST00000574848 ROM1Q03395 351 aa9.08□□□□□ -0.96
LITAF-216ENST00000574848 EIF2B1Q14232 305 aaKnown RBP9.08□□□□□ -0.96
LITAF-216ENST00000574848 TRIM16LQ309B1 348 aa9.08□□□□□ -0.96
LITAF-216ENST00000574848 SLC36A2Q495M3 483 aa9.08□□□□□ -0.96
LITAF-216ENST00000574848 HSD17B12Q53GQ0 312 aa9.08□□□□□ -0.96
LITAF-216ENST00000574848 ZMAT1Q5H9K5 638 aa9.08□□□□□ -0.96
LITAF-216ENST00000574848 LIPNQ5VXI9 398 aa9.08□□□□□ -0.96
LITAF-216ENST00000574848 DEGS2Q6QHC5 323 aa9.08□□□□□ -0.96
LITAF-216ENST00000574848 METAP1DQ6UB28 335 aaPredicted RBP9.08□□□□□ -0.96
LITAF-216ENST00000574848 FOXL2NBQ6ZUU3 175 aa9.08□□□□□ -0.96
LITAF-216ENST00000574848 KRT77Q7Z794 578 aa9.08□□□□□ -0.96
LITAF-216ENST00000574848 ZNF679Q8IYX0 411 aa9.08□□□□□ -0.96
LITAF-216ENST00000574848 RFLNBQ8N5W9 214 aa9.08□□□□□ -0.96
LITAF-216ENST00000574848 PARP16Q8N5Y8 322 aa9.08□□□□□ -0.96
LITAF-216ENST00000574848 SYT14Q8NB59 555 aa9.08□□□□□ -0.96
LITAF-216ENST00000574848 OR5AK2Q8NH90 309 aa9.08□□□□□ -0.96
LITAF-216ENST00000574848 CHPT1Q8WUD6 406 aa9.08□□□□□ -0.96
LITAF-216ENST00000574848 NABP1Q96AH0 204 aa9.08□□□□□ -0.96
LITAF-216ENST00000574848 VRK1Q99986 396 aaPredicted RBP9.08□□□□□ -0.96
LITAF-216ENST00000574848 MRI1Q9BV20 369 aa9.08□□□□□ -0.96
LITAF-216ENST00000574848 MRPL37Q9BZE1 423 aaKnown RBP9.08□□□□□ -0.96
LITAF-216ENST00000574848 DAPK2Q9UIK4 370 aa9.08□□□□□ -0.96
LITAF-216ENST00000574848 COA3Q9Y2R0 106 aaPredicted RBP9.08□□□□□ -0.96
LITAF-216ENST00000574848 GRIP1Q9Y3R0 1128 aa9.08□□□□□ -0.96
LITAF-216ENST00000574848 SIRT4Q9Y6E7 314 aaPredicted RBP9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms