RNA–Protein interactions for RNA: ENST00000574003.1

RPAIN-214, Transcript of RPA interacting protein, humanhuman

TSL 4 BASIC

Gene RPAIN, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-214ENST00000574003 CDK5Q00535 292 aa9.43□□□□□ -0.9
RPAIN-214ENST00000574003 SCGB2A2Q13296 93 aa9.43□□□□□ -0.9
RPAIN-214ENST00000574003 OR8B8Q15620 311 aa9.43□□□□□ -0.9
RPAIN-214ENST00000574003 TIGD6Q17RP2 521 aa9.43□□□□□ -0.9
RPAIN-214ENST00000574003 WDR25Q64LD2 544 aaPredicted RBP9.43□□□□□ -0.9
RPAIN-214ENST00000574003 USP43Q70EL4 1123 aa9.43□□□□□ -0.9
RPAIN-214ENST00000574003 BCDIN3DQ7Z5W3 292 aaKnown RBP9.43□□□□□ -0.9
RPAIN-214ENST00000574003 C11orf53Q8IXP5 236 aa9.43□□□□□ -0.9
RPAIN-214ENST00000574003 C1orf87Q8N0U7 546 aa9.43□□□□□ -0.9
RPAIN-214ENST00000574003 TEX29Q8N6K0 151 aa9.43□□□□□ -0.9
RPAIN-214ENST00000574003 CELF2-AS1Q8N7Q2 184 aa9.43□□□□□ -0.9
RPAIN-214ENST00000574003 RAB40AQ8WXH6 277 aa9.43□□□□□ -0.9
RPAIN-214ENST00000574003 SPSB4Q96A44 273 aa9.43□□□□□ -0.9
RPAIN-214ENST00000574003 DACT3Q96B18 629 aaPredicted RBP9.43□□□□□ -0.9
RPAIN-214ENST00000574003 NUDT16L1Q9BRJ7 211 aaKnown RBP9.43□□□□□ -0.9
RPAIN-214ENST00000574003 MRI1Q9BV20 369 aa9.43□□□□□ -0.9
RPAIN-214ENST00000574003 SUCNR1Q9BXA5 334 aa9.43□□□□□ -0.9
RPAIN-214ENST00000574003 TTTY10Q9BZA0 68 aa9.43□□□□□ -0.9
RPAIN-214ENST00000574003 FGF23Q9GZV9 251 aaPredicted RBP9.43□□□□□ -0.9
RPAIN-214ENST00000574003 FN3KRPQ9HA64 309 aa9.43□□□□□ -0.9
RPAIN-214ENST00000574003 MRPL15Q9P015 296 aaKnown RBP9.43□□□□□ -0.9
RPAIN-214ENST00000574003 DNAJB9Q9UBS3 223 aa9.43□□□□□ -0.9
RPAIN-214ENST00000574003 RHBDD3Q9Y3P4 386 aa9.43□□□□□ -0.9
RPAIN-214ENST00000574003 TRAV40A0A0B4J280 105 aa9.42□□□□□ -0.9
RPAIN-214ENST00000574003 hCG_1807616A0A1W2PRN6 198 aa9.42□□□□□ -0.9
RPAIN-214ENST00000574003 PRR32B1ATL7 298 aa9.42□□□□□ -0.9
RPAIN-214ENST00000574003 LGALS8O00214 317 aa9.42□□□□□ -0.9
RPAIN-214ENST00000574003 GSC2O15499 205 aa9.42□□□□□ -0.9
RPAIN-214ENST00000574003 ADAM20O43506 726 aa9.42□□□□□ -0.9
RPAIN-214ENST00000574003 XRCC2O43543 280 aa9.42□□□□□ -0.9
RPAIN-214ENST00000574003 GMDSO60547 372 aa9.42□□□□□ -0.9
RPAIN-214ENST00000574003 MITFO75030 526 aaPredicted RBP9.42□□□□□ -0.9
RPAIN-214ENST00000574003 DNAJC8O75937 253 aaPredicted RBP9.42□□□□□ -0.9
RPAIN-214ENST00000574003 PTBP3O95758 552 aaKnown RBP9.42□□□□□ -0.9
RPAIN-214ENST00000574003 TFF1P04155 84 aa9.42□□□□□ -0.9
RPAIN-214ENST00000574003 MRPL3P09001 348 aaKnown RBP9.42□□□□□ -0.9
RPAIN-214ENST00000574003 H2BFMP0C1H6 154 aa9.42□□□□□ -0.9
RPAIN-214ENST00000574003 SLC2A5P22732 501 aa9.42□□□□□ -0.9
RPAIN-214ENST00000574003 FPR2P25090 351 aa9.42□□□□□ -0.9
RPAIN-214ENST00000574003 CFPP27918 469 aa9.42□□□□□ -0.9
RPAIN-214ENST00000574003 SLC15A1P46059 708 aa9.42□□□□□ -0.9
RPAIN-214ENST00000574003 GSK3AP49840 483 aa9.42□□□□□ -0.9
RPAIN-214ENST00000574003 DAPP51397 102 aa9.42□□□□□ -0.9
RPAIN-214ENST00000574003 GMFBP60983 142 aa9.42□□□□□ -0.9
RPAIN-214ENST00000574003 FGF12P61328 243 aa9.42□□□□□ -0.9
RPAIN-214ENST00000574003 RPS7P62081 194 aaKnown RBP9.42□□□□□ -0.9
RPAIN-214ENST00000574003 DNAL1Q4LDG9 190 aa9.42□□□□□ -0.9
RPAIN-214ENST00000574003 DMRTC1Q5HYR2 192 aa9.42□□□□□ -0.9
RPAIN-214ENST00000574003 RUSC1-AS1Q66K80 236 aa9.42□□□□□ -0.9
RPAIN-214ENST00000574003 LRRN1Q6UXK5 716 aa9.42□□□□□ -0.9
RPAIN-214ENST00000574003 DCDC5Q6ZRR9 648 aa9.42□□□□□ -0.9
RPAIN-214ENST00000574003 FAM90A1Q86YD7 464 aa9.42□□□□□ -0.9
RPAIN-214ENST00000574003 GCSAMQ8N6F7 178 aa9.42□□□□□ -0.9
RPAIN-214ENST00000574003 OTOSQ8NHW6 89 aa9.42□□□□□ -0.9
RPAIN-214ENST00000574003 FAM216AQ8WUB2 273 aa9.42□□□□□ -0.9
RPAIN-214ENST00000574003 GCDHQ92947 438 aaPredicted RBP9.42□□□□□ -0.9
RPAIN-214ENST00000574003 PGAM5Q96HS1 289 aa9.42□□□□□ -0.9
RPAIN-214ENST00000574003 LYZL4Q96KX0 146 aa9.42□□□□□ -0.9
RPAIN-214ENST00000574003 TECTBQ96PL2 329 aa9.42□□□□□ -0.9
RPAIN-214ENST00000574003 ZNF556Q9HAH1 456 aa9.42□□□□□ -0.9
RPAIN-214ENST00000574003 SMURF1Q9HCE7 757 aa9.42□□□□□ -0.9
RPAIN-214ENST00000574003 TVP23BQ9NYZ1 205 aa9.42□□□□□ -0.9
RPAIN-214ENST00000574003 CLN8Q9UBY8 286 aa9.42□□□□□ -0.9
RPAIN-214ENST00000574003 KIR2DS1A0A191URI9 304 aa9.41□□□□□ -0.9
RPAIN-214ENST00000574003 CCDC182A6NF36 153 aa9.41□□□□□ -0.9
RPAIN-214ENST00000574003 DNAJC9-AS1A6NH13 148 aa9.41□□□□□ -0.9
RPAIN-214ENST00000574003 ANKRD30BLA7E2S9 258 aa9.41□□□□□ -0.9
RPAIN-214ENST00000574003 TNFRSF13BO14836 293 aaPredicted RBP9.41□□□□□ -0.9
RPAIN-214ENST00000574003 SFTPBP07988 381 aa9.41□□□□□ -0.9
RPAIN-214ENST00000574003 PAICSP22234 425 aaKnown RBP9.41□□□□□ -0.9
RPAIN-214ENST00000574003 ACKR3P25106 362 aa9.41□□□□□ -0.9
RPAIN-214ENST00000574003 EPHA2P29317 976 aa9.41□□□□□ -0.9
RPAIN-214ENST00000574003 PSMB10P40306 273 aa9.41□□□□□ -0.9
RPAIN-214ENST00000574003 BLVRAP53004 296 aa9.41□□□□□ -0.9
RPAIN-214ENST00000574003 APOFQ13790 326 aa9.41□□□□□ -0.9
RPAIN-214ENST00000574003 GK3PQ14409 553 aa9.41□□□□□ -0.9
RPAIN-214ENST00000574003 TUSC1Q2TAM9 212 aa9.41□□□□□ -0.9
RPAIN-214ENST00000574003 BTNL3Q6UXE8 466 aa9.41□□□□□ -0.9
RPAIN-214ENST00000574003 BRD3OSQ6XYD6 125 aa9.41□□□□□ -0.9
RPAIN-214ENST00000574003 SHFQ7M4L6 423 aa9.41□□□□□ -0.9
RPAIN-214ENST00000574003 NLRC3Q7RTR2 1065 aa9.41□□□□□ -0.9
RPAIN-214ENST00000574003 PARP8Q8N3A8 854 aa9.41□□□□□ -0.9
RPAIN-214ENST00000574003 PAPD5Q8NDF8 572 aaKnown RBP9.41□□□□□ -0.9
RPAIN-214ENST00000574003 OR8B12Q8NGG6 310 aa9.41□□□□□ -0.9
RPAIN-214ENST00000574003 OR8S1Q8NH09 359 aa9.41□□□□□ -0.9
RPAIN-214ENST00000574003 LRRC29Q8WV35 223 aa9.41□□□□□ -0.9
RPAIN-214ENST00000574003 ZFAND2BQ8WV99 257 aa9.41□□□□□ -0.9
RPAIN-214ENST00000574003 ERGIC1Q969X5 290 aa9.41□□□□□ -0.9
RPAIN-214ENST00000574003 UTP4Q969X6 686 aaKnown RBP9.41□□□□□ -0.9
RPAIN-214ENST00000574003 PPP1R14AQ96A00 147 aa9.41□□□□□ -0.9
RPAIN-214ENST00000574003 PLEKHA8Q96JA3 519 aa9.41□□□□□ -0.9
RPAIN-214ENST00000574003 PAPOLGQ9BWT3 736 aaKnown RBP9.41□□□□□ -0.9
RPAIN-214ENST00000574003 MS4A7Q9GZW8 240 aaPredicted RBP9.41□□□□□ -0.9
RPAIN-214ENST00000574003 SLC22A4Q9H015 551 aa9.41□□□□□ -0.9
RPAIN-214ENST00000574003 OR10A2Q9H208 303 aa9.41□□□□□ -0.9
RPAIN-214ENST00000574003 SLC25A19Q9HC21 320 aa9.41□□□□□ -0.9
RPAIN-214ENST00000574003 COPS3Q9UNS2 423 aa9.41□□□□□ -0.9
RPAIN-214ENST00000574003 TMEM89A2RUT3 159 aa9.4□□□□□ -0.9
RPAIN-214ENST00000574003 OOEPA6NGQ2 149 aa9.4□□□□□ -0.9
RPAIN-214ENST00000574003 ZNF850A8MQ14 1090 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms