RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 CSNK2BP67870 215 aa10.84□□□□□ -0.67
TRAPPC1-206ENST00000573989 MRPL28Q13084 256 aaKnown RBP10.84□□□□□ -0.67
TRAPPC1-206ENST00000573989 GALEQ14376 348 aa10.84□□□□□ -0.67
TRAPPC1-206ENST00000573989 OR8B8Q15620 311 aa10.84□□□□□ -0.67
TRAPPC1-206ENST00000573989 CDONQ4KMG0 1287 aa10.84□□□□□ -0.67
TRAPPC1-206ENST00000573989 ZNF684Q5T5D7 378 aa10.84□□□□□ -0.67
TRAPPC1-206ENST00000573989 IZUMO2Q6UXV1 221 aa10.84□□□□□ -0.67
TRAPPC1-206ENST00000573989 ELMOD2Q8IZ81 293 aa10.84□□□□□ -0.67
TRAPPC1-206ENST00000573989 CELF2-AS1Q8N7Q2 184 aa10.84□□□□□ -0.67
TRAPPC1-206ENST00000573989 OR10AD1Q8NGE0 317 aa10.84□□□□□ -0.67
TRAPPC1-206ENST00000573989 OR52I1Q8NGK6 324 aa10.84□□□□□ -0.67
TRAPPC1-206ENST00000573989 TIMD4Q96H15 378 aa10.84□□□□□ -0.67
TRAPPC1-206ENST00000573989 OR2V2Q96R30 315 aa10.84□□□□□ -0.67
TRAPPC1-206ENST00000573989 SIGLEC11Q96RL6 698 aa10.84□□□□□ -0.67
TRAPPC1-206ENST00000573989 ALG8Q9BVK2 526 aa10.84□□□□□ -0.67
TRAPPC1-206ENST00000573989 ABCB9Q9NP78 766 aa10.84□□□□□ -0.67
TRAPPC1-206ENST00000573989 C14orf119Q9NWQ9 140 aa10.84□□□□□ -0.67
TRAPPC1-206ENST00000573989 CHCHD3Q9NX63 227 aaKnown RBP10.84□□□□□ -0.67
TRAPPC1-206ENST00000573989 ZNF319Q9P2F9 582 aa10.84□□□□□ -0.67
TRAPPC1-206ENST00000573989 PPP1R3CQ9UQK1 317 aa10.84□□□□□ -0.67
TRAPPC1-206ENST00000573989 A0A1B0GWJ7 208 aa10.83□□□□□ -0.68
TRAPPC1-206ENST00000573989 C5orf63A6NC05 138 aa10.83□□□□□ -0.68
TRAPPC1-206ENST00000573989 EFCAB10A6NFE3 127 aa10.83□□□□□ -0.68
TRAPPC1-206ENST00000573989 LRRC30A6NM36 301 aa10.83□□□□□ -0.68
TRAPPC1-206ENST00000573989 ANXA2P2A6NMY6 339 aa10.83□□□□□ -0.68
TRAPPC1-206ENST00000573989 CLDN25C9JDP6 229 aa10.83□□□□□ -0.68
TRAPPC1-206ENST00000573989 SMAD7O15105 426 aaKnown RBP10.83□□□□□ -0.68
TRAPPC1-206ENST00000573989 PPIHO43447 177 aaKnown RBP10.83□□□□□ -0.68
TRAPPC1-206ENST00000573989 FAM20BO75063 409 aa10.83□□□□□ -0.68
TRAPPC1-206ENST00000573989 SRSF10O75494 262 aaKnown RBP10.83□□□□□ -0.68
TRAPPC1-206ENST00000573989 HEXAP06865 529 aa10.83□□□□□ -0.68
TRAPPC1-206ENST00000573989 RPSAP08865 295 aaKnown RBP10.83□□□□□ -0.68
TRAPPC1-206ENST00000573989 HTR1AP08908 422 aa10.83□□□□□ -0.68
TRAPPC1-206ENST00000573989 GNAO1P09471 354 aa10.83□□□□□ -0.68
TRAPPC1-206ENST00000573989 USF1P22415 310 aaPredicted RBP10.83□□□□□ -0.68
TRAPPC1-206ENST00000573989 NR4A2P43354 598 aa10.83□□□□□ -0.68
TRAPPC1-206ENST00000573989 LOXL1Q08397 574 aaPredicted RBP10.83□□□□□ -0.68
TRAPPC1-206ENST00000573989 RIN1Q13671 783 aa10.83□□□□□ -0.68
TRAPPC1-206ENST00000573989 SMN1Q16637 294 aaKnown RBP10.83□□□□□ -0.68
TRAPPC1-206ENST00000573989 TP53I3Q53FA7 332 aa10.83□□□□□ -0.68
TRAPPC1-206ENST00000573989 C6orf52Q5T4I8 152 aa10.83□□□□□ -0.68
TRAPPC1-206ENST00000573989 LHFPL3Q86UP9 236 aa10.83□□□□□ -0.68
TRAPPC1-206ENST00000573989 SYS1Q8N2H4 156 aa10.83□□□□□ -0.68
TRAPPC1-206ENST00000573989 CCDC54Q8NEL0 328 aa10.83□□□□□ -0.68
TRAPPC1-206ENST00000573989 OR8S1Q8NH09 359 aa10.83□□□□□ -0.68
TRAPPC1-206ENST00000573989 OR51E1Q8TCB6 317 aa10.83□□□□□ -0.68
TRAPPC1-206ENST00000573989 ITLN1Q8WWA0 313 aa10.83□□□□□ -0.68
TRAPPC1-206ENST00000573989 CCL17Q92583 94 aa10.83□□□□□ -0.68
TRAPPC1-206ENST00000573989 RAB1CQ92928 201 aa10.83□□□□□ -0.68
TRAPPC1-206ENST00000573989 ERGIC1Q969X5 290 aa10.83□□□□□ -0.68
TRAPPC1-206ENST00000573989 COX4I2Q96KJ9 171 aa10.83□□□□□ -0.68
TRAPPC1-206ENST00000573989 ADAT1Q9BUB4 502 aaKnown RBP10.83□□□□□ -0.68
TRAPPC1-206ENST00000573989 PAPOLGQ9BWT3 736 aaKnown RBP10.83□□□□□ -0.68
TRAPPC1-206ENST00000573989 BPESC1Q9GZL8 116 aa10.83□□□□□ -0.68
TRAPPC1-206ENST00000573989 FGF20Q9NP95 211 aaPredicted RBP10.83□□□□□ -0.68
TRAPPC1-206ENST00000573989 G6PC2Q9NQR9 355 aa10.83□□□□□ -0.68
TRAPPC1-206ENST00000573989 GPR84Q9NQS5 396 aa10.83□□□□□ -0.68
TRAPPC1-206ENST00000573989 ZNF275Q9NSD4 429 aaPredicted RBP10.83□□□□□ -0.68
TRAPPC1-206ENST00000573989 ERVK13-1Q9NX77 482 aa10.83□□□□□ -0.68
TRAPPC1-206ENST00000573989 MYRFQ9Y2G1 1151 aa10.83□□□□□ -0.68
TRAPPC1-206ENST00000573989 EXOSC1Q9Y3B2 195 aaKnown RBP10.83□□□□□ -0.68
TRAPPC1-206ENST00000573989 MPC1Q9Y5U8 109 aa10.83□□□□□ -0.68
TRAPPC1-206ENST00000573989 A0A1B0GVI7 797 aa10.82□□□□□ -0.68
TRAPPC1-206ENST00000573989 VWC2LB2RUY7 222 aa10.82□□□□□ -0.68
TRAPPC1-206ENST00000573989 F5H5P2 479 aa10.82□□□□□ -0.68
TRAPPC1-206ENST00000573989 LYNX1G3V0Z9 82 aa10.82□□□□□ -0.68
TRAPPC1-206ENST00000573989 H0YL77 283 aa10.82□□□□□ -0.68
TRAPPC1-206ENST00000573989 J3QLW9 94 aa10.82□□□□□ -0.68
TRAPPC1-206ENST00000573989 MLNRO43193 412 aa10.82□□□□□ -0.68
TRAPPC1-206ENST00000573989 LILRA1O75019 489 aa10.82□□□□□ -0.68
TRAPPC1-206ENST00000573989 DHRS3O75911 302 aa10.82□□□□□ -0.68
TRAPPC1-206ENST00000573989 PNPP00491 289 aa10.82□□□□□ -0.68
TRAPPC1-206ENST00000573989 TTRP02766 147 aa10.82□□□□□ -0.68
TRAPPC1-206ENST00000573989 HLA-DPB1P04440 258 aa10.82□□□□□ -0.68
TRAPPC1-206ENST00000573989 UBCP0CG48 685 aaKnown RBP10.82□□□□□ -0.68
TRAPPC1-206ENST00000573989 LYNX1P0DP58 116 aa10.82□□□□□ -0.68
TRAPPC1-206ENST00000573989 PIPP12273 146 aaPredicted RBP10.82□□□□□ -0.68
TRAPPC1-206ENST00000573989 IRF2P14316 349 aa10.82□□□□□ -0.68
TRAPPC1-206ENST00000573989 ZNF12P17014 697 aa10.82□□□□□ -0.68
TRAPPC1-206ENST00000573989 ZNF19P17023 458 aa10.82□□□□□ -0.68
TRAPPC1-206ENST00000573989 ANOS1P23352 680 aa10.82□□□□□ -0.68
TRAPPC1-206ENST00000573989 CD200P41217 278 aa10.82□□□□□ -0.68
TRAPPC1-206ENST00000573989 CHN2P52757 468 aa10.82□□□□□ -0.68
TRAPPC1-206ENST00000573989 GBX2P52951 348 aaPredicted RBP10.82□□□□□ -0.68
TRAPPC1-206ENST00000573989 OR12D2P58182 307 aa10.82□□□□□ -0.68
TRAPPC1-206ENST00000573989 MFGE8Q08431 387 aaPredicted RBP10.82□□□□□ -0.68
TRAPPC1-206ENST00000573989 RIPPLY1Q0D2K3 151 aa10.82□□□□□ -0.68
TRAPPC1-206ENST00000573989 ZBTB37Q5TC79 503 aa10.82□□□□□ -0.68
TRAPPC1-206ENST00000573989 TMPRSS11AQ6ZMR5 421 aa10.82□□□□□ -0.68
TRAPPC1-206ENST00000573989 DOK3Q7L591 496 aa10.82□□□□□ -0.68
TRAPPC1-206ENST00000573989 BIVMQ86UB2 503 aa10.82□□□□□ -0.68
TRAPPC1-206ENST00000573989 CATSPERDQ86XM0 798 aa10.82□□□□□ -0.68
TRAPPC1-206ENST00000573989 C1orf87Q8N0U7 546 aa10.82□□□□□ -0.68
TRAPPC1-206ENST00000573989 PLPP7Q8NBV4 271 aa10.82□□□□□ -0.68
TRAPPC1-206ENST00000573989 SEMA6DQ8NFY4 1073 aa10.82□□□□□ -0.68
TRAPPC1-206ENST00000573989 RORBQ92753 470 aa10.82□□□□□ -0.68
TRAPPC1-206ENST00000573989 HPS1Q92902 700 aa10.82□□□□□ -0.68
TRAPPC1-206ENST00000573989 YIPF5Q969M3 257 aa10.82□□□□□ -0.68
TRAPPC1-206ENST00000573989 TMEM80Q96HE8 168 aa10.82□□□□□ -0.68
TRAPPC1-206ENST00000573989 FAM71F1Q96KD3 344 aaPredicted RBP10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms