RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 MRPL13Q9BYD1 178 aaKnown RBP13.84□□□□□ -0.19
NUP88-207ENST00000573584 MMP26Q9NRE1 261 aa13.84□□□□□ -0.19
NUP88-207ENST00000573584 ALKBH4Q9NXW9 302 aa13.84□□□□□ -0.19
NUP88-207ENST00000573584 B3GAT1Q9P2W7 334 aa13.84□□□□□ -0.19
NUP88-207ENST00000573584 A0A1W2PR77 199 aa13.84□□□□□ -0.19
NUP88-207ENST00000573584 ZNF878C9JN71 531 aa13.84□□□□□ -0.19
NUP88-207ENST00000573584 LMO7DNF2Z398 122 aa13.84□□□□□ -0.19
NUP88-207ENST00000573584 HCKP08631 526 aa13.84□□□□□ -0.19
NUP88-207ENST00000573584 CFHR1Q03591 330 aa13.84□□□□□ -0.19
NUP88-207ENST00000573584 PRSS54Q6PEW0 395 aa13.84□□□□□ -0.19
NUP88-207ENST00000573584 OR5H2Q8NGV7 314 aa13.84□□□□□ -0.19
NUP88-207ENST00000573584 ARHGAP5-AS1Q96IT6 56 aa13.84□□□□□ -0.19
NUP88-207ENST00000573584 FAM71F1Q96KD3 344 aaPredicted RBP13.84□□□□□ -0.19
NUP88-207ENST00000573584 METTL8Q9H825 291 aaKnown RBP13.84□□□□□ -0.19
NUP88-207ENST00000573584 OR2S2Q9NQN1 319 aa13.84□□□□□ -0.19
NUP88-207ENST00000573584 GPR84Q9NQS5 396 aa13.84□□□□□ -0.19
NUP88-207ENST00000573584 ANAPC10Q9UM13 185 aa13.84□□□□□ -0.19
NUP88-207ENST00000573584 SRPK3Q9UPE1 567 aa13.84□□□□□ -0.19
NUP88-207ENST00000573584 CARHSP1Q9Y2V2 147 aaKnown RBP13.84□□□□□ -0.19
NUP88-207ENST00000573584 KLF2Q9Y5W3 355 aaPredicted RBP13.84□□□□□ -0.19
NUP88-207ENST00000573584 CEACAM18A8MTB9 384 aa13.84□□□□□ -0.19
NUP88-207ENST00000573584 CRTAPO75718 401 aaPredicted RBP13.84□□□□□ -0.19
NUP88-207ENST00000573584 CDAP32320 146 aa13.84□□□□□ -0.19
NUP88-207ENST00000573584 CLRN1P58418 232 aa13.84□□□□□ -0.19
NUP88-207ENST00000573584 ARFRP1Q13795 201 aa13.84□□□□□ -0.19
NUP88-207ENST00000573584 D2HGDHQ8N465 521 aa13.84□□□□□ -0.19
NUP88-207ENST00000573584 GPER1Q99527 375 aa13.84□□□□□ -0.19
NUP88-207ENST00000573584 KLHL13Q9P2N7 655 aa13.84□□□□□ -0.19
NUP88-207ENST00000573584 IGHV1OR15-9A0A0B4J2B8 117 aa13.83□□□□□ -0.2
NUP88-207ENST00000573584 OPN1LWP04000 364 aa13.83□□□□□ -0.2
NUP88-207ENST00000573584 CD27P26842 260 aa13.83□□□□□ -0.2
NUP88-207ENST00000573584 SUPT4H1P63272 117 aaKnown RBP13.83□□□□□ -0.2
NUP88-207ENST00000573584 MFAP5Q13361 173 aa13.83□□□□□ -0.2
NUP88-207ENST00000573584 ANKRD55Q3KP44 614 aa13.83□□□□□ -0.2
NUP88-207ENST00000573584 OGFOD3Q6PK18 319 aa13.83□□□□□ -0.2
NUP88-207ENST00000573584 PGAP1Q75T13 922 aa13.83□□□□□ -0.2
NUP88-207ENST00000573584 RAB11FIP2Q7L804 512 aa13.83□□□□□ -0.2
NUP88-207ENST00000573584 FAM219AQ8IW50 185 aa13.83□□□□□ -0.2
NUP88-207ENST00000573584 PLPP5Q8NEB5 264 aa13.83□□□□□ -0.2
NUP88-207ENST00000573584 OR8B12Q8NGG6 310 aa13.83□□□□□ -0.2
NUP88-207ENST00000573584 SCGB3A2Q96PL1 93 aa13.83□□□□□ -0.2
NUP88-207ENST00000573584 OCSTAMPQ9BR26 566 aa13.83□□□□□ -0.2
NUP88-207ENST00000573584 RTBDNQ9BSG5 229 aaPredicted RBP13.83□□□□□ -0.2
NUP88-207ENST00000573584 ST6GALNAC5Q9BVH7 336 aa13.83□□□□□ -0.2
NUP88-207ENST00000573584 MOB1AQ9H8S9 216 aa13.83□□□□□ -0.2
NUP88-207ENST00000573584 UQCC1Q9NVA1 299 aa13.83□□□□□ -0.2
NUP88-207ENST00000573584 ZNF319Q9P2F9 582 aa13.83□□□□□ -0.2
NUP88-207ENST00000573584 IGHV1OR21-1A0A087WYE8 117 aa13.83□□□□□ -0.2
NUP88-207ENST00000573584 EFNA2O43921 213 aa13.83□□□□□ -0.2
NUP88-207ENST00000573584 SNAPINO95295 136 aa13.83□□□□□ -0.2
NUP88-207ENST00000573584 AMY2BP19961 511 aa13.83□□□□□ -0.2
NUP88-207ENST00000573584 AKR1D1P51857 326 aa13.83□□□□□ -0.2
NUP88-207ENST00000573584 ZNF121P58317 390 aaPredicted RBP13.83□□□□□ -0.2
NUP88-207ENST00000573584 MYBPHQ13203 477 aa13.83□□□□□ -0.2
NUP88-207ENST00000573584 GFOD2Q3B7J2 385 aa13.83□□□□□ -0.2
NUP88-207ENST00000573584 DHRS7BQ6IAN0 325 aaPredicted RBP13.83□□□□□ -0.2
NUP88-207ENST00000573584 PLXDC1Q8IUK5 500 aa13.83□□□□□ -0.2
NUP88-207ENST00000573584 OR56B1Q8NGI3 324 aa13.83□□□□□ -0.2
NUP88-207ENST00000573584 OR10C1Q96KK4 312 aa13.83□□□□□ -0.2
NUP88-207ENST00000573584 HRH4Q9H3N8 390 aa13.83□□□□□ -0.2
NUP88-207ENST00000573584 LPAR3Q9UBY5 353 aa13.83□□□□□ -0.2
NUP88-207ENST00000573584 HTR3BO95264 441 aa13.82□□□□□ -0.2
NUP88-207ENST00000573584 FOSL2P15408 326 aa13.82□□□□□ -0.2
NUP88-207ENST00000573584 ZNF17P17021 662 aa13.82□□□□□ -0.2
NUP88-207ENST00000573584 FPR2P25090 351 aa13.82□□□□□ -0.2
NUP88-207ENST00000573584 OR3A2P47893 321 aa13.82□□□□□ -0.2
NUP88-207ENST00000573584 SUMO3P55854 103 aaPredicted RBP13.82□□□□□ -0.2
NUP88-207ENST00000573584 GABREP78334 506 aa13.82□□□□□ -0.2
NUP88-207ENST00000573584 DCDP81605 110 aaKnown RBP13.82□□□□□ -0.2
NUP88-207ENST00000573584 PJVKQ0ZLH3 352 aa13.82□□□□□ -0.2
NUP88-207ENST00000573584 SHEQ5VZ18 495 aa13.82□□□□□ -0.2
NUP88-207ENST00000573584 DRAM2Q6UX65 266 aa13.82□□□□□ -0.2
NUP88-207ENST00000573584 TMEM200AQ86VY9 491 aa13.82□□□□□ -0.2
NUP88-207ENST00000573584 UEVLDQ8IX04 471 aa13.82□□□□□ -0.2
NUP88-207ENST00000573584 APCDD1LQ8NCL9 501 aa13.82□□□□□ -0.2
NUP88-207ENST00000573584 TSTD1Q8NFU3 115 aa13.82□□□□□ -0.2
NUP88-207ENST00000573584 NUBPLQ8TB37 319 aa13.82□□□□□ -0.2
NUP88-207ENST00000573584 ZNF768Q9H5H4 540 aaKnown RBP13.82□□□□□ -0.2
NUP88-207ENST00000573584 ASH2LQ9UBL3 628 aa13.82□□□□□ -0.2
NUP88-207ENST00000573584 COL5A1P20908 1838 aaPredicted RBP13.82□□□□□ -0.2
NUP88-207ENST00000573584 A0A1W2PNV4 684 aa13.82□□□□□ -0.2
NUP88-207ENST00000573584 SDCBPO00560 298 aaPredicted RBP13.82□□□□□ -0.2
NUP88-207ENST00000573584 GLULP15104 373 aa13.82□□□□□ -0.2
NUP88-207ENST00000573584 RPL35P42766 123 aaKnown RBP13.82□□□□□ -0.2
NUP88-207ENST00000573584 HNRNPKP61978 463 aaKnown RBP eCLIP13.82□□□□□ -0.2
NUP88-207ENST00000573584 MST1LQ2TV78 715 aa13.82□□□□□ -0.2
NUP88-207ENST00000573584 DMRTC1Q5HYR2 192 aa13.82□□□□□ -0.2
NUP88-207ENST00000573584 CARD17Q5XLA6 110 aa13.82□□□□□ -0.2
NUP88-207ENST00000573584 IL34Q6ZMJ4 242 aa13.82□□□□□ -0.2
NUP88-207ENST00000573584 AQP10Q96PS8 301 aa13.82□□□□□ -0.2
NUP88-207ENST00000573584 URM1Q9BTM9 101 aaKnown RBP13.82□□□□□ -0.2
NUP88-207ENST00000573584 SEC11CQ9BY50 192 aa13.82□□□□□ -0.2
NUP88-207ENST00000573584 FANCFQ9NPI8 374 aa13.82□□□□□ -0.2
NUP88-207ENST00000573584 GSKIPQ9P0R6 139 aa13.82□□□□□ -0.2
NUP88-207ENST00000573584 PISDQ9UG56 409 aa13.82□□□□□ -0.2
NUP88-207ENST00000573584 MFNGO00587 321 aa13.81□□□□□ -0.2
NUP88-207ENST00000573584 RER1O15258 196 aa13.81□□□□□ -0.2
NUP88-207ENST00000573584 IGHG1P01857 330 aa13.81□□□□□ -0.2
NUP88-207ENST00000573584 LYL1P12980 280 aa13.81□□□□□ -0.2
NUP88-207ENST00000573584 ANOS1P23352 680 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms