RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 SPARCP09486 303 aa6.25□□□□□ -1.41
NUP88-205ENST00000572809 ZNF3P17036 446 aa6.25□□□□□ -1.41
NUP88-205ENST00000572809 PRKACGP22612 351 aa6.25□□□□□ -1.41
NUP88-205ENST00000572809 GATA3P23771 443 aa6.25□□□□□ -1.41
NUP88-205ENST00000572809 POU1F1P28069 291 aa6.25□□□□□ -1.41
NUP88-205ENST00000572809 OTX1P32242 354 aaPredicted RBP6.25□□□□□ -1.41
NUP88-205ENST00000572809 GRK5P34947 590 aa6.25□□□□□ -1.41
NUP88-205ENST00000572809 SLC15A1P46059 708 aa6.25□□□□□ -1.41
NUP88-205ENST00000572809 SLC6A9P48067 706 aa6.25□□□□□ -1.41
NUP88-205ENST00000572809 PRKXP51817 358 aa6.25□□□□□ -1.41
NUP88-205ENST00000572809 CBX1P83916 185 aa6.25□□□□□ -1.41
NUP88-205ENST00000572809 HNRNPA0Q13151 305 aaKnown RBP6.25□□□□□ -1.41
NUP88-205ENST00000572809 GINS1Q14691 196 aa6.25□□□□□ -1.41
NUP88-205ENST00000572809 PCK2Q16822 640 aa6.25□□□□□ -1.41
NUP88-205ENST00000572809 TMEM155Q4W5P6 130 aa6.25□□□□□ -1.41
NUP88-205ENST00000572809 LINC01590Q5TEZ4 76 aa6.25□□□□□ -1.41
NUP88-205ENST00000572809 DCAF12L2Q5VW00 463 aa6.25□□□□□ -1.41
NUP88-205ENST00000572809 SHQ1Q6PI26 577 aaKnown RBP6.25□□□□□ -1.41
NUP88-205ENST00000572809 DRAM2Q6UX65 266 aa6.25□□□□□ -1.41
NUP88-205ENST00000572809 ZNF771Q7L3S4 317 aaPredicted RBP6.25□□□□□ -1.41
NUP88-205ENST00000572809 MRPL21Q7Z2W9 205 aaKnown RBP6.25□□□□□ -1.41
NUP88-205ENST00000572809 SPICQ8N5J4 248 aa6.25□□□□□ -1.41
NUP88-205ENST00000572809 RFLNBQ8N5W9 214 aa6.25□□□□□ -1.41
NUP88-205ENST00000572809 TEX29Q8N6K0 151 aa6.25□□□□□ -1.41
NUP88-205ENST00000572809 PAPD5Q8NDF8 572 aaKnown RBP6.25□□□□□ -1.41
NUP88-205ENST00000572809 OR10AD1Q8NGE0 317 aa6.25□□□□□ -1.41
NUP88-205ENST00000572809 OR6K6Q8NGW6 343 aa6.25□□□□□ -1.41
NUP88-205ENST00000572809 ZNF420Q8TAQ5 688 aaPredicted RBP6.25□□□□□ -1.41
NUP88-205ENST00000572809 SPRYD4Q8WW59 207 aaPredicted RBP6.25□□□□□ -1.41
NUP88-205ENST00000572809 OTULINQ96BN8 352 aa6.25□□□□□ -1.41
NUP88-205ENST00000572809 SLAMF6Q96DU3 332 aa6.25□□□□□ -1.41
NUP88-205ENST00000572809 ZNF799Q96GE5 643 aa6.25□□□□□ -1.41
NUP88-205ENST00000572809 RAX2Q96IS3 184 aa6.25□□□□□ -1.41
NUP88-205ENST00000572809 SIGLEC11Q96RL6 698 aa6.25□□□□□ -1.41
NUP88-205ENST00000572809 METTL17Q9H7H0 456 aaPredicted RBP6.25□□□□□ -1.41
NUP88-205ENST00000572809 MED20Q9H944 212 aa6.25□□□□□ -1.41
NUP88-205ENST00000572809 ZNF556Q9HAH1 456 aa6.25□□□□□ -1.41
NUP88-205ENST00000572809 PATZ1Q9HBE1 687 aaKnown RBP6.25□□□□□ -1.41
NUP88-205ENST00000572809 DDX28Q9NUL7 540 aaKnown RBP6.25□□□□□ -1.41
NUP88-205ENST00000572809 DNAJB9Q9UBS3 223 aa6.25□□□□□ -1.41
NUP88-205ENST00000572809 N6AMT1Q9Y5N5 214 aa6.25□□□□□ -1.41
NUP88-205ENST00000572809 COMMD3-BMI1R4GMX3 469 aa6.25□□□□□ -1.41
NUP88-205ENST00000572809 DYSFO75923 2080 aa6.25□□□□□ -1.41
NUP88-205ENST00000572809 A0A0G2JMP0 313 aa6.24□□□□□ -1.41
NUP88-205ENST00000572809 IGHV3-64DA0A0J9YX35 117 aa6.24□□□□□ -1.41
NUP88-205ENST00000572809 A0A0X1KG70 313 aa6.24□□□□□ -1.41
NUP88-205ENST00000572809 A0A1B0GWJ7 208 aa6.24□□□□□ -1.41
NUP88-205ENST00000572809 TCRBV3S1A0A5B6 114 aa6.24□□□□□ -1.41
NUP88-205ENST00000572809 GGT3PA6NGU5 568 aa6.24□□□□□ -1.41
NUP88-205ENST00000572809 LRRC30A6NM36 301 aa6.24□□□□□ -1.41
NUP88-205ENST00000572809 CD300LBA8K4G0 201 aa6.24□□□□□ -1.41
NUP88-205ENST00000572809 PRR23D1E9PI22 279 aaPredicted RBP6.24□□□□□ -1.41
NUP88-205ENST00000572809 J3QLI3 93 aa6.24□□□□□ -1.41
NUP88-205ENST00000572809 FKBP6O75344 327 aa6.24□□□□□ -1.41
NUP88-205ENST00000572809 GLCEO94923 617 aa6.24□□□□□ -1.41
NUP88-205ENST00000572809 APOL3O95236 402 aa6.24□□□□□ -1.41
NUP88-205ENST00000572809 CYB5R3P00387 301 aaPredicted RBP6.24□□□□□ -1.41
NUP88-205ENST00000572809 HMGN1P05114 100 aa6.24□□□□□ -1.41
NUP88-205ENST00000572809 WNT2P09544 360 aa6.24□□□□□ -1.41
NUP88-205ENST00000572809 PRR23D2P0DMB1 279 aaPredicted RBP6.24□□□□□ -1.41
NUP88-205ENST00000572809 PF4V1P10720 104 aa6.24□□□□□ -1.41
NUP88-205ENST00000572809 PSKH1P11801 424 aa6.24□□□□□ -1.41
NUP88-205ENST00000572809 OSMP13725 252 aa6.24□□□□□ -1.41
NUP88-205ENST00000572809 ANXA8P13928 327 aa6.24□□□□□ -1.41
NUP88-205ENST00000572809 PAICSP22234 425 aaKnown RBP6.24□□□□□ -1.41
NUP88-205ENST00000572809 CA6P23280 308 aa6.24□□□□□ -1.41
NUP88-205ENST00000572809 ZFP36P26651 326 aaKnown RBP6.24□□□□□ -1.41
NUP88-205ENST00000572809 MDH2P40926 338 aaKnown RBP6.24□□□□□ -1.41
NUP88-205ENST00000572809 RASSF2P50749 326 aa6.24□□□□□ -1.41
NUP88-205ENST00000572809 RAD23AP54725 363 aa6.24□□□□□ -1.41
NUP88-205ENST00000572809 BTG1P62324 171 aa6.24□□□□□ -1.41
NUP88-205ENST00000572809 LCN2P80188 198 aa6.24□□□□□ -1.41
NUP88-205ENST00000572809 CDK5Q00535 292 aa6.24□□□□□ -1.41
NUP88-205ENST00000572809 SRSF2Q01130 221 aaKnown RBP6.24□□□□□ -1.41
NUP88-205ENST00000572809 ROM1Q03395 351 aa6.24□□□□□ -1.41
NUP88-205ENST00000572809 ZNF92Q03936 586 aa6.24□□□□□ -1.41
NUP88-205ENST00000572809 BNIP1Q12981 228 aa6.24□□□□□ -1.41
NUP88-205ENST00000572809 SCGB2A2Q13296 93 aa6.24□□□□□ -1.41
NUP88-205ENST00000572809 MAB21L1Q13394 359 aa6.24□□□□□ -1.41
NUP88-205ENST00000572809 EIF2B1Q14232 305 aaKnown RBP6.24□□□□□ -1.41
NUP88-205ENST00000572809 ZMYND11Q15326 602 aa6.24□□□□□ -1.41
NUP88-205ENST00000572809 ZNF181Q2M3W8 571 aa6.24□□□□□ -1.41
NUP88-205ENST00000572809 SNAI3Q3KNW1 292 aa6.24□□□□□ -1.41
NUP88-205ENST00000572809 KRTAP24-1Q3LI83 254 aa6.24□□□□□ -1.41
NUP88-205ENST00000572809 CT83Q5H943 113 aa6.24□□□□□ -1.41
NUP88-205ENST00000572809 GLYATL3Q5SZD4 288 aa6.24□□□□□ -1.41
NUP88-205ENST00000572809 ETV3LQ6ZN32 361 aa6.24□□□□□ -1.41
NUP88-205ENST00000572809 SHFQ7M4L6 423 aa6.24□□□□□ -1.41
NUP88-205ENST00000572809 DPY19L4Q7Z388 723 aa6.24□□□□□ -1.41
NUP88-205ENST00000572809 MOGAT3Q86VF5 341 aa6.24□□□□□ -1.41
NUP88-205ENST00000572809 ERI1Q8IV48 349 aaKnown RBP6.24□□□□□ -1.41
NUP88-205ENST00000572809 HS3ST5Q8IZT8 346 aa6.24□□□□□ -1.41
NUP88-205ENST00000572809 MUC20Q8N307 709 aaPredicted RBP6.24□□□□□ -1.41
NUP88-205ENST00000572809 IQCF1Q8N6M8 205 aa6.24□□□□□ -1.41
NUP88-205ENST00000572809 OR4M2Q8NGB6 313 aa6.24□□□□□ -1.41
NUP88-205ENST00000572809 ERGIC1Q969X5 290 aa6.24□□□□□ -1.41
NUP88-205ENST00000572809 COPS4Q9BT78 406 aa6.24□□□□□ -1.41
NUP88-205ENST00000572809 CADM1Q9BY67 442 aaKnown RBP6.24□□□□□ -1.41
NUP88-205ENST00000572809 SLC22A4Q9H015 551 aa6.24□□□□□ -1.41
NUP88-205ENST00000572809 OR51V1Q9H2C8 321 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 184.1 ms